| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is metK [H]
Identifier: 183222316
GI number: 183222316
Start: 3072150
End: 3073316
Strand: Reverse
Name: metK [H]
Synonym: LEPBI_I2968
Alternate gene names: 183222316
Gene position: 3073316-3072150 (Counterclockwise)
Preceding gene: 183222317
Following gene: 183222315
Centisome position: 85.38
GC content: 43.44
Gene sequence:
>1167_bases ATGTCCTCTCTAAAAAACTATATCTTCACTTCTGAGTCCGTATCTGAAGGACACCCAGACAAAGTCTGTGACCAAATTTC TGATGCCATTCTCGATGCGTATTTAGCGCAAGATCCAAAATCCCGTGTTGCTTGTGAAACCCTCGTGACCACAAACTTAG TCGTCATTGCTGGTGAGATTACAAGCAAAGGAAAAGTTGACACACAAGAAATCGCCCGTGATGTGATTCGTAAAATTGGA TACAACGACATCAATATGTACTTTGATGCAGACTTTGCTGTGGTTGCCTCTCACGTGCATGCGCAGTCACCTGATATCGC CCAAGGGGTGAATGAAGGGGAAGGCCTCCACACAGAACAAGGTGCTGGCGACCAAGGTTTGATGTTTGGTTTTGCGATTG CAGAAACCCCTGAACTCATGCCGGCTCCACTCTATTACTCACATAAACTTTTAGAGCATTTAGCAGAACTTCGTCACACA AACAAAATTGATTGGCTTCGACCTGATGCAAAATCACAAGTCACCATCCAGTACGAAGATGGAAAACCAAAACGTGTGGA TACAGTGGTGATTTCTACCCAACACAAACCTGGTGTCACTCATAAACAAATCGAAGAAGCAGTCATTGAAGAATGTATCA AAAAAATGATACCAAAAGAACTTCTTGTGAACACTCGTTATTTCATCAACCCAACTGGTAAGTTTGAAATTGGTGGTCCA CATGGTGATACTGGTCTCACAGGTCGTAAGATCATTGTGGATACATACGGTGGAATGGGTCGTCATGGTGGTGGGGCTTT CTCTGGAAAGGATCCATCAAAAGTAGACCGTTCCGCTGCTTACATGGGCCGTTACATTGCAAAAAACGTAGTCGCAGCAG GTCTTGCACATAAATGTGAAGTCCAGTTGGCATACGCTATTGGTGTGGCACAGCCTGTATCCGTTCTTGTGGATACTTTT GGAACAGGAACCATTTCTGATGAAGAAATTGCAAAACGAGTTCTTGCCAACTTCAAACTCACTCCAAAAGGGATCGTAGA AGGTTTAGATCTTCTTGGAAAGGGAAGAACTTACCAAGAAACAGCAGCATATGGTCACTTCGGAAGAACAGGAAGTACAT TCACTTGGGAAAAAACTGACAAAGCAGACGCTTTGAAAAAAGGATAA
Upstream 100 bases:
>100_bases AATGCGGACTCCCTCGAGAGCTATGTGCGTGGACTCTTTCCTGACAATTCTATTGACGTACCACCTAAAAACGAAACTTT AACCAAGTAAGGTAAAAAAT
Downstream 100 bases:
>100_bases TTATGGGAGCACCTAGCCAATCCACAGCGGACAAAAAAGCAACAAGAGATGCATATGGCGAAGCCTTAGTTGAGTTAGGT GCATCTAGACAAGATGTGGT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSSLKNYIFTSESVSEGHPDKVCDQISDAILDAYLAQDPKSRVACETLVTTNLVVIAGEITSKGKVDTQEIARDVIRKIG YNDINMYFDADFAVVASHVHAQSPDIAQGVNEGEGLHTEQGAGDQGLMFGFAIAETPELMPAPLYYSHKLLEHLAELRHT NKIDWLRPDAKSQVTIQYEDGKPKRVDTVVISTQHKPGVTHKQIEEAVIEECIKKMIPKELLVNTRYFINPTGKFEIGGP HGDTGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAHKCEVQLAYAIGVAQPVSVLVDTF GTGTISDEEIAKRVLANFKLTPKGIVEGLDLLGKGRTYQETAAYGHFGRTGSTFTWEKTDKADALKKG
Sequences:
>Translated_388_residues MSSLKNYIFTSESVSEGHPDKVCDQISDAILDAYLAQDPKSRVACETLVTTNLVVIAGEITSKGKVDTQEIARDVIRKIG YNDINMYFDADFAVVASHVHAQSPDIAQGVNEGEGLHTEQGAGDQGLMFGFAIAETPELMPAPLYYSHKLLEHLAELRHT NKIDWLRPDAKSQVTIQYEDGKPKRVDTVVISTQHKPGVTHKQIEEAVIEECIKKMIPKELLVNTRYFINPTGKFEIGGP HGDTGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAHKCEVQLAYAIGVAQPVSVLVDTF GTGTISDEEIAKRVLANFKLTPKGIVEGLDLLGKGRTYQETAAYGHFGRTGSTFTWEKTDKADALKKG >Mature_387_residues SSLKNYIFTSESVSEGHPDKVCDQISDAILDAYLAQDPKSRVACETLVTTNLVVIAGEITSKGKVDTQEIARDVIRKIGY NDINMYFDADFAVVASHVHAQSPDIAQGVNEGEGLHTEQGAGDQGLMFGFAIAETPELMPAPLYYSHKLLEHLAELRHTN KIDWLRPDAKSQVTIQYEDGKPKRVDTVVISTQHKPGVTHKQIEEAVIEECIKKMIPKELLVNTRYFINPTGKFEIGGPH GDTGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAHKCEVQLAYAIGVAQPVSVLVDTFG TGTISDEEIAKRVLANFKLTPKGIVEGLDLLGKGRTYQETAAYGHFGRTGSTFTWEKTDKADALKKG
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=377, Percent_Identity=52.2546419098143, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI4557737, Length=376, Percent_Identity=52.1276595744681, Blast_Score=361, Evalue=1e-100, Organism=Escherichia coli, GI1789311, Length=384, Percent_Identity=60.15625, Blast_Score=471, Evalue=1e-134, Organism=Caenorhabditis elegans, GI25145633, Length=384, Percent_Identity=54.4270833333333, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17538498, Length=377, Percent_Identity=54.9071618037135, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17551082, Length=386, Percent_Identity=54.6632124352332, Blast_Score=378, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17538494, Length=381, Percent_Identity=54.3307086614173, Blast_Score=376, Evalue=1e-105, Organism=Caenorhabditis elegans, GI32565905, Length=381, Percent_Identity=49.0813648293963, Blast_Score=312, Evalue=1e-85, Organism=Caenorhabditis elegans, GI25145635, Length=334, Percent_Identity=52.0958083832335, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI32565911, Length=331, Percent_Identity=52.2658610271903, Blast_Score=304, Evalue=7e-83, Organism=Caenorhabditis elegans, GI32565903, Length=304, Percent_Identity=51.6447368421053, Blast_Score=266, Evalue=1e-71, Organism=Caenorhabditis elegans, GI32565909, Length=77, Percent_Identity=66.2337662337662, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI32565907, Length=43, Percent_Identity=74.4186046511628, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320710, Length=386, Percent_Identity=52.8497409326425, Blast_Score=388, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6323209, Length=378, Percent_Identity=53.4391534391534, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI45552159, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580529, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580537, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580533, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580535, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580531, Length=377, Percent_Identity=51.1936339522546, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580527, Length=377, Percent_Identity=50.6631299734748, Blast_Score=345, Evalue=4e-95, Organism=Drosophila melanogaster, GI24580525, Length=377, Percent_Identity=50.6631299734748, Blast_Score=345, Evalue=4e-95, Organism=Drosophila melanogaster, GI24580541, Length=378, Percent_Identity=48.6772486772487, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI24580539, Length=122, Percent_Identity=50.8196721311475, Blast_Score=125, Evalue=5e-29,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42182; Mature: 42051
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLKNYIFTSESVSEGHPDKVCDQISDAILDAYLAQDPKSRVACETLVTTNLVVIAGEI CCCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECC TSKGKVDTQEIARDVIRKIGYNDINMYFDADFAVVASHVHAQSPDIAQGVNEGEGLHTEQ CCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC GAGDQGLMFGFAIAETPELMPAPLYYSHKLLEHLAELRHTNKIDWLRPDAKSQVTIQYED CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC GKPKRVDTVVISTQHKPGVTHKQIEEAVIEECIKKMIPKELLVNTRYFINPTGKFEIGGP CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCEEECCC HGDTGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAHKCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHE VQLAYAIGVAQPVSVLVDTFGTGTISDEEIAKRVLANFKLTPKGIVEGLDLLGKGRTYQE EEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHH TAAYGHFGRTGSTFTWEKTDKADALKKG HHHHCCCCCCCCEEEECCCCHHHHHCCC >Mature Secondary Structure SSLKNYIFTSESVSEGHPDKVCDQISDAILDAYLAQDPKSRVACETLVTTNLVVIAGEI CCHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECC TSKGKVDTQEIARDVIRKIGYNDINMYFDADFAVVASHVHAQSPDIAQGVNEGEGLHTEQ CCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC GAGDQGLMFGFAIAETPELMPAPLYYSHKLLEHLAELRHTNKIDWLRPDAKSQVTIQYED CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC GKPKRVDTVVISTQHKPGVTHKQIEEAVIEECIKKMIPKELLVNTRYFINPTGKFEIGGP CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCEEECCC HGDTGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAHKCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHE VQLAYAIGVAQPVSVLVDTFGTGTISDEEIAKRVLANFKLTPKGIVEGLDLLGKGRTYQE EEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHH TAAYGHFGRTGSTFTWEKTDKADALKKG HHHHCCCCCCCCEEEECCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA