Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222248
Identifier: 183222248
GI number: 183222248
Start: 2992365
End: 2993336
Strand: Reverse
Name: 183222248
Synonym: LEPBI_I2899
Alternate gene names: NA
Gene position: 2993336-2992365 (Counterclockwise)
Preceding gene: 183222249
Following gene: 183222247
Centisome position: 83.16
GC content: 38.07
Gene sequence:
>972_bases ATGAAACGTACAATCATACAAAAATTGTCGGTTTTGGGATTTGTGGCGATTTTTGCCATGTTTGCCGCAGCTTGCCAAAA AGACTCAAAAGAGACTGTAACAACCGTTACAGATAAAAACCAACCAGCGAGTAATGTCGTCATCGCTTTCGTAAAAGGGG ACGTAGTTGTTTTGAGAGAAAATGGCCAAATCAAACCAAGTTTAGGTGATACCTTAACTTCTCAAGACACAATTGTGACA GGTCAAAATGGATCTGTTGAACTTTTGGTTGGTGAAGACGGTGTTCTCAAACTCAACAAAAATACGTCGCTTAGCGTAAG CCAAGCCTTTGCTGCAAACGACGGATCACGTGAAACAGAAGTCAACATGCAATACGGAAAACTCGTGACTGTTCTTCGCA AAGAAAGAAAAACAGAATCGTTTAATGTTGTGACTCCAACTTCGATTGCGGGTGTTCGTGGAACTATCTTTATGACGAAT GTTGAAAATCCTTCTGCAAAAGGTGGAAACGTAGCTTGTGGTTCTTCTAACTGTGTTGTGAAATACACGGTTCTTGATGG TGCCGTTGCGATCCGTAAATCAAACTCTGATAACGAAATCGTAGTCGACAAACAAAAGTCAGCTGAAGTATCGACAGACA CAAAACTATCTGAGAAAATGATCAAACCAATGGACAAACAATCTTTAGGTGAGATGAAAGAAATGTTAGTGTTCGAAAAT ACAAAAATGTTACAATTTGAGTCCCTTGCAAATGAACTCAAATCAAACAACGAAGAACTTCAAAAAATGAACCTAGGTTC TTCTGTTGAGGAATTGGAAAAAGCAGCCAAAACTCGTGAAATCACCAAATCAAAGTCAGATGAAGTGATCACAACTGCAA AATCAATTGAAGATTCCAAATACATTAAAAAAGATGTGCAAAAAGATTCACTAAAATTAGCTCCAAAAGAGAGTTTTGAT AAGACGAAATGA
Upstream 100 bases:
>100_bases ACCATTGGACAAAAGCTGTCACAAAAAGATATTAGGGAAAAGAGTTGCCAAGGCTTCAGTTGTTATCTAATTTAAGAAAG TTATTTCCGGAGGAAGGAAT
Downstream 100 bases:
>100_bases GATATGTTTATTTACCGGTCCTTTGTTTTTTAGTCGGTTATTGTTCCTCGGTCACAAAGATCGAAACACTCAATCGAAGT TTTACAAAACCTAAGTTTGT
Product: putative outer membrane lipoprotein Qlp42
Products: NA
Alternate protein names: LipL45-Like Protein; LipL45-Related Lipoprotein; LipL45-Related Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKRTIIQKLSVLGFVAIFAMFAAACQKDSKETVTTVTDKNQPASNVVIAFVKGDVVVLRENGQIKPSLGDTLTSQDTIVT GQNGSVELLVGEDGVLKLNKNTSLSVSQAFAANDGSRETEVNMQYGKLVTVLRKERKTESFNVVTPTSIAGVRGTIFMTN VENPSAKGGNVACGSSNCVVKYTVLDGAVAIRKSNSDNEIVVDKQKSAEVSTDTKLSEKMIKPMDKQSLGEMKEMLVFEN TKMLQFESLANELKSNNEELQKMNLGSSVEELEKAAKTREITKSKSDEVITTAKSIEDSKYIKKDVQKDSLKLAPKESFD KTK
Sequences:
>Translated_323_residues MKRTIIQKLSVLGFVAIFAMFAAACQKDSKETVTTVTDKNQPASNVVIAFVKGDVVVLRENGQIKPSLGDTLTSQDTIVT GQNGSVELLVGEDGVLKLNKNTSLSVSQAFAANDGSRETEVNMQYGKLVTVLRKERKTESFNVVTPTSIAGVRGTIFMTN VENPSAKGGNVACGSSNCVVKYTVLDGAVAIRKSNSDNEIVVDKQKSAEVSTDTKLSEKMIKPMDKQSLGEMKEMLVFEN TKMLQFESLANELKSNNEELQKMNLGSSVEELEKAAKTREITKSKSDEVITTAKSIEDSKYIKKDVQKDSLKLAPKESFD KTK >Mature_323_residues MKRTIIQKLSVLGFVAIFAMFAAACQKDSKETVTTVTDKNQPASNVVIAFVKGDVVVLRENGQIKPSLGDTLTSQDTIVT GQNGSVELLVGEDGVLKLNKNTSLSVSQAFAANDGSRETEVNMQYGKLVTVLRKERKTESFNVVTPTSIAGVRGTIFMTN VENPSAKGGNVACGSSNCVVKYTVLDGAVAIRKSNSDNEIVVDKQKSAEVSTDTKLSEKMIKPMDKQSLGEMKEMLVFEN TKMLQFESLANELKSNNEELQKMNLGSSVEELEKAAKTREITKSKSDEVITTAKSIEDSKYIKKDVQKDSLKLAPKESFD KTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35197; Mature: 35197
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIIQKLSVLGFVAIFAMFAAACQKDSKETVTTVTDKNQPASNVVIAFVKGDVVVLRE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEECC NGQIKPSLGDTLTSQDTIVTGQNGSVELLVGEDGVLKLNKNTSLSVSQAFAANDGSRETE CCEECCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCEE VNMQYGKLVTVLRKERKTESFNVVTPTSIAGVRGTIFMTNVENPSAKGGNVACGSSNCVV EEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEE KYTVLDGAVAIRKSNSDNEIVVDKQKSAEVSTDTKLSEKMIKPMDKQSLGEMKEMLVFEN EEEEECCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC TKMLQFESLANELKSNNEELQKMNLGSSVEELEKAAKTREITKSKSDEVITTAKSIEDSK CCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHH YIKKDVQKDSLKLAPKESFDKTK HHHHHHCCCCEECCCCCCCCCCC >Mature Secondary Structure MKRTIIQKLSVLGFVAIFAMFAAACQKDSKETVTTVTDKNQPASNVVIAFVKGDVVVLRE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEECC NGQIKPSLGDTLTSQDTIVTGQNGSVELLVGEDGVLKLNKNTSLSVSQAFAANDGSRETE CCEECCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCEE VNMQYGKLVTVLRKERKTESFNVVTPTSIAGVRGTIFMTNVENPSAKGGNVACGSSNCVV EEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEE KYTVLDGAVAIRKSNSDNEIVVDKQKSAEVSTDTKLSEKMIKPMDKQSLGEMKEMLVFEN EEEEECCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC TKMLQFESLANELKSNNEELQKMNLGSSVEELEKAAKTREITKSKSDEVITTAKSIEDSK CCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHH YIKKDVQKDSLKLAPKESFDKTK HHHHHHCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA