Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183222247

Identifier: 183222247

GI number: 183222247

Start: 2990755

End: 2992368

Strand: Reverse

Name: 183222247

Synonym: LEPBI_I2898

Alternate gene names: NA

Gene position: 2992368-2990755 (Counterclockwise)

Preceding gene: 183222248

Following gene: 183222246

Centisome position: 83.13

GC content: 38.35

Gene sequence:

>1614_bases
ATGAGATATGTTTATTTACCGGTCCTTTGTTTTTTAGTCGGTTATTGTTCCTCGGTCACAAAGATCGAAACACTCAATCG
AAGTTTTACAAAACCTAAGTTTGTCACTCCAGATCTTGGAGAGTCTGAACCCCTTCCTTCGGGTAGAGATTACAGAGAAC
GACTGGTAAATAAACCAACCCCAAGTTTCACTCTCCTCTGGAAACAAATTCCAGAGGGGTTTTCTAGTTCTGACTTATCC
CTCATTGAAGAAAAAATCCTTTTTCCCCATTCCAAATTAGGTGCTTATCAAAAATCACCTTCCAAACCAGATCCCAAATT
TTTTGAGTCAAATGATATTGATTTAGTTTTGGAACTCAGTTTGTCTAAATCTGCAGAACGATTGACAGTGGATGTCCAAT
ACAAGGATCCAGTTCTTTCGCAAAACTTTGGCAAGGCGGTATTTGTTTACCAAGAAGAAAAAGAGCCTAAAAACAAATCA
GTGAAATCCTTTGATGTTTTTCACGGGAAAAAACACCTACTTCCTTTAACCGAATTTGTACCTTCCTATTTTTTAGAAGT
TTCTTCTCCTTCCAGCGATGATTTACGATCTTTTTTTACTTCTTCCTTACAAGGAAAAGTTTCTGTATTTTCCACCTCTC
CCGGTACCATCATTTACTTAGATGGAGTAGAAGTGGGGAAAGCTCCTCTTCTTAATTATACTCTCTTAAATGGAAAACAT
ACATTATCCTTTGCCAAACCTGGGAAAGACCAAGTGAAACGGAATATTTTAGTCCGTGCAGGGAAAACCACAAGAGCGTT
CCAAGAATGGAATGATGACATCTCACAAGGAACCGTTGTTGTTTCTAGTTTTCCTCCTGGACTCGATGTTGTGATAGCAG
GTCAAAAAAAAGGCAAAACACAATACGCAGAGTCTGGTGTACCTTACGGTAGTTATCCGATCCAATTCATTCGAACTACT
CTTGATTCCCATTATGAATATGCGAAAGCAGGAATCAAAATCCGCCCAAAACAAATTACATCCATCGCTTTACCAATTTC
TTTAGAGGATGGGGTAGGTTGGGAATCAGAAGAATTTTGGAACCTCACATCACCTTCGCCTAACTTTTCTGCGACATTCC
CTGGAAAATTGACTTTTGCCAAAAACAAGGAACTTTCCAAGGGTTGGTATGGAGTGTATTCGGAAGATTTGATTCCTGAT
TATTTGGAAGCCGAACTTGTGTTAGACTTAAAAAAGGAATACAATGGGGCGGTTGGACTTTCCATCCATGACCACAATCA
AAATTCGATTTTGGTTTATGTAGATCAAACTGACTTTCATATTATTAAATTTTCCCAAAACGATTTGGAAGCACCTGTTC
GCTCCTCTTACCGATGGAACAAAGAAGATGAACTAAAAGGTCGAAGTATAAAGTTTTCCACTGATTTCGAGAAAAAAATG
ATCCGTTTGTATTTGGGTAACAAAATGGTAGAAGAATTCCCTTGGAGTTTTGATACGTTTTGGAATTTAGGTGTTCTTAC
TCCACATAATGCTCCTTTGGTGGGAGTTCCTCTTCGTGGATTAAAAATTCAATACCCCGATATGGTTAAGTTCGAACAAA
GGTTCCAAAAATGA

Upstream 100 bases:

>100_bases
TCACAACTGCAAAATCAATTGAAGATTCCAAATACATTAAAAAAGATGTGCAAAAAGATTCACTAAAATTAGCTCCAAAA
GAGAGTTTTGATAAGACGAA

Downstream 100 bases:

>100_bases
AAAAAAATATCATTCTATGTGTATTACTTTTATCTTTCATTGGTTGTCGTTCTCGTGATTTCCAAGCTGTCACTGTAAAA
GATTCTGTTGTTGAAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MRYVYLPVLCFLVGYCSSVTKIETLNRSFTKPKFVTPDLGESEPLPSGRDYRERLVNKPTPSFTLLWKQIPEGFSSSDLS
LIEEKILFPHSKLGAYQKSPSKPDPKFFESNDIDLVLELSLSKSAERLTVDVQYKDPVLSQNFGKAVFVYQEEKEPKNKS
VKSFDVFHGKKHLLPLTEFVPSYFLEVSSPSSDDLRSFFTSSLQGKVSVFSTSPGTIIYLDGVEVGKAPLLNYTLLNGKH
TLSFAKPGKDQVKRNILVRAGKTTRAFQEWNDDISQGTVVVSSFPPGLDVVIAGQKKGKTQYAESGVPYGSYPIQFIRTT
LDSHYEYAKAGIKIRPKQITSIALPISLEDGVGWESEEFWNLTSPSPNFSATFPGKLTFAKNKELSKGWYGVYSEDLIPD
YLEAELVLDLKKEYNGAVGLSIHDHNQNSILVYVDQTDFHIIKFSQNDLEAPVRSSYRWNKEDELKGRSIKFSTDFEKKM
IRLYLGNKMVEEFPWSFDTFWNLGVLTPHNAPLVGVPLRGLKIQYPDMVKFEQRFQK

Sequences:

>Translated_537_residues
MRYVYLPVLCFLVGYCSSVTKIETLNRSFTKPKFVTPDLGESEPLPSGRDYRERLVNKPTPSFTLLWKQIPEGFSSSDLS
LIEEKILFPHSKLGAYQKSPSKPDPKFFESNDIDLVLELSLSKSAERLTVDVQYKDPVLSQNFGKAVFVYQEEKEPKNKS
VKSFDVFHGKKHLLPLTEFVPSYFLEVSSPSSDDLRSFFTSSLQGKVSVFSTSPGTIIYLDGVEVGKAPLLNYTLLNGKH
TLSFAKPGKDQVKRNILVRAGKTTRAFQEWNDDISQGTVVVSSFPPGLDVVIAGQKKGKTQYAESGVPYGSYPIQFIRTT
LDSHYEYAKAGIKIRPKQITSIALPISLEDGVGWESEEFWNLTSPSPNFSATFPGKLTFAKNKELSKGWYGVYSEDLIPD
YLEAELVLDLKKEYNGAVGLSIHDHNQNSILVYVDQTDFHIIKFSQNDLEAPVRSSYRWNKEDELKGRSIKFSTDFEKKM
IRLYLGNKMVEEFPWSFDTFWNLGVLTPHNAPLVGVPLRGLKIQYPDMVKFEQRFQK
>Mature_537_residues
MRYVYLPVLCFLVGYCSSVTKIETLNRSFTKPKFVTPDLGESEPLPSGRDYRERLVNKPTPSFTLLWKQIPEGFSSSDLS
LIEEKILFPHSKLGAYQKSPSKPDPKFFESNDIDLVLELSLSKSAERLTVDVQYKDPVLSQNFGKAVFVYQEEKEPKNKS
VKSFDVFHGKKHLLPLTEFVPSYFLEVSSPSSDDLRSFFTSSLQGKVSVFSTSPGTIIYLDGVEVGKAPLLNYTLLNGKH
TLSFAKPGKDQVKRNILVRAGKTTRAFQEWNDDISQGTVVVSSFPPGLDVVIAGQKKGKTQYAESGVPYGSYPIQFIRTT
LDSHYEYAKAGIKIRPKQITSIALPISLEDGVGWESEEFWNLTSPSPNFSATFPGKLTFAKNKELSKGWYGVYSEDLIPD
YLEAELVLDLKKEYNGAVGLSIHDHNQNSILVYVDQTDFHIIKFSQNDLEAPVRSSYRWNKEDELKGRSIKFSTDFEKKM
IRLYLGNKMVEEFPWSFDTFWNLGVLTPHNAPLVGVPLRGLKIQYPDMVKFEQRFQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60876; Mature: 60876

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVYLPVLCFLVGYCSSVTKIETLNRSFTKPKFVTPDLGESEPLPSGRDYRERLVNKPT
CEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PSFTLLWKQIPEGFSSSDLSLIEEKILFPHSKLGAYQKSPSKPDPKFFESNDIDLVLELS
CCEEEHHHHHCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
LSKSAERLTVDVQYKDPVLSQNFGKAVFVYQEEKEPKNKSVKSFDVFHGKKHLLPLTEFV
CCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHH
PSYFLEVSSPSSDDLRSFFTSSLQGKVSVFSTSPGTIIYLDGVEVGKAPLLNYTLLNGKH
HHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCE
TLSFAKPGKDQVKRNILVRAGKTTRAFQEWNDDISQGTVVVSSFPPGLDVVIAGQKKGKT
EEEECCCCHHHHHHEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCC
QYAESGVPYGSYPIQFIRTTLDSHYEYAKAGIKIRPKQITSIALPISLEDGVGWESEEFW
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEEEECCCCCCCCHHCE
NLTSPSPNFSATFPGKLTFAKNKELSKGWYGVYSEDLIPDYLEAELVLDLKKEYNGAVGL
ECCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCCEEEE
SIHDHNQNSILVYVDQTDFHIIKFSQNDLEAPVRSSYRWNKEDELKGRSIKFSTDFEKKM
EEEECCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCCCHHCCCCEEEECCCHHHHH
IRLYLGNKMVEEFPWSFDTFWNLGVLTPHNAPLVGVPLRGLKIQYPDMVKFEQRFQK
HHHHHCCHHHHHCCCCCHHHEECEEECCCCCCEEECCCCCCEECCCCHHHHHHHHCC
>Mature Secondary Structure
MRYVYLPVLCFLVGYCSSVTKIETLNRSFTKPKFVTPDLGESEPLPSGRDYRERLVNKPT
CEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PSFTLLWKQIPEGFSSSDLSLIEEKILFPHSKLGAYQKSPSKPDPKFFESNDIDLVLELS
CCEEEHHHHHCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
LSKSAERLTVDVQYKDPVLSQNFGKAVFVYQEEKEPKNKSVKSFDVFHGKKHLLPLTEFV
CCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHH
PSYFLEVSSPSSDDLRSFFTSSLQGKVSVFSTSPGTIIYLDGVEVGKAPLLNYTLLNGKH
HHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCE
TLSFAKPGKDQVKRNILVRAGKTTRAFQEWNDDISQGTVVVSSFPPGLDVVIAGQKKGKT
EEEECCCCHHHHHHEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCC
QYAESGVPYGSYPIQFIRTTLDSHYEYAKAGIKIRPKQITSIALPISLEDGVGWESEEFW
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEEEECCCCCCCCHHCE
NLTSPSPNFSATFPGKLTFAKNKELSKGWYGVYSEDLIPDYLEAELVLDLKKEYNGAVGL
ECCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCCEEEE
SIHDHNQNSILVYVDQTDFHIIKFSQNDLEAPVRSSYRWNKEDELKGRSIKFSTDFEKKM
EEEECCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCCCHHCCCCEEEECCCHHHHH
IRLYLGNKMVEEFPWSFDTFWNLGVLTPHNAPLVGVPLRGLKIQYPDMVKFEQRFQK
HHHHHCCHHHHHCCCCCHHHEECEEECCCCCCEEECCCCCCEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA