| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fixL [H]
Identifier: 183222227
GI number: 183222227
Start: 2970512
End: 2972332
Strand: Reverse
Name: fixL [H]
Synonym: LEPBI_I2878
Alternate gene names: 183222227
Gene position: 2972332-2970512 (Counterclockwise)
Preceding gene: 183222228
Following gene: 183222226
Centisome position: 82.57
GC content: 38.82
Gene sequence:
>1821_bases GTGAATTTTTCTTCAAAAGATCCAAATCTAAACAATTCACTAAAGAATCAAAACTACCTACTCATCCTTCGCCAAATGGA AACCTTGGGGAAACTCGGTCATTGGGAATTTGATTTTATCAATCAAACCTTATTTTGGTCAGAAGGAGTTTATATCATTT TAGAAATGGATCCTTCTTCGATGCCAGTCTCACTAGAGTTAGGTTATAACTCTGTTCATCCTGATGATAGAGAAAAAGCA AAACAACATATGGAAGATGTCATTACAAAAGGGATTCCTTATAATTTAGAATGTCGTTTGTTAACGACCAAGGGAACCAT CAAATACATCCATAGCCAAGCCGATGTGATACGTGATGAATCGGGTCTGCCGATCCAAATCGTAGGTATTTTCCAAGACA TCACCGAAAGAACAGAAGCCTATATCCAACTCAAACAACAAGAAGTAAGGCTTAGTTCTATCTTACAATCGGAACCAGAA TGTGTGAAAGTTGTTTCCCCAGATGGAATCCTCATCGAAATGAATCCAGCTGGCTTAAGTATGATCGAAGCTGATTGTCC TGAAGAAGCGATTGGTCAGAAAGTAGAATCACTCATTGATCCAGCAGATTTAAAATTTTACCAAAACATTCATGACAATG CACTCAAAGGAATTAAGTCGAGTGCTCGCTTTCGTATCATAGGTATGAAAGGGACTCATCGATGGATGGAAAGTACTTCC GTTCCCCTTACGAATCAAAAAGGGGAGATCACTTCTGTATTGAGTTTGACACGTGATATCTCTGAAAAAGTCACGAACGA AGAAAAATTAATTCGGATCAAACGAAACCAAGAAGCTCTCATTAACAGTACTTCTGACTTAATCTGGTCAATCGATACAC AGTATTGTTTGGTGGCTGCCAACAAAACATTTTTGGATGTCCTTAGTTTTTTGCAAAAAGTGCCAGCAAAAGAAGGTGAT TCCGTTCTTGTAAAAACAGCTGGAGAAGAATTTTATTATAAGTGGAAAGAGTATTATGAACGAGGACTTTCTGGAGAATC CTTTAGGACCTACGAAAATTTTATCAGTCCCATTACTCATGAGGAAGAACATAGAGAAGTTTCTTTTAATCCAATTCGTA ATATAGACGAAAAAATCACTGGCCTTGCTTGTTTTTCAAAGGACATCACGAGTCTGATGCGAAAAAGTAAGGAACTGTTG TTAAACGAAAAAAGATTTCGCGCGTTAGTGGAAAATGGGGCCGATGTAATTATGATTTTAAATCCCAGAGGCCAAGGAAA ATATGTGTCCCCTTCCATTAAAAAAGTAATGGGTTATACGGAAACAGAAGCAATGAATCTTAGTTTATTCGACGTTATCC ACCCTGACGATGCACCCAGACTAAAAAAAAGACTTTTTGAAGTATTGGCTCTCCCACTAGGCGCATCCTTACAAAGCCAA ACATTTCGAGCCAAACACAAAGATGGATCTTGGAGGTATGTGGAATCCACTCTTACCAATATGCTCTCGGATGAATCCAT TGGTGGCATTGTGGACAATTTCCACGATGTAACCGAAAAAGAGACACAAATGGAAGCCATCCAAACCCAAAACCAAAAAC TAAAGACCATTGCCTGGACCCAATCACATGTTGTGCGGAGTCCACTCGCAAGGATTATGGGAATCATAGAACTCATTCGC ACGGGAAGTTTGACAAAAGAAGAAGAAGAGAAAAGCCTTCGGTATCTATTAGAATCCGCTAATGAATTGGATGATGTGAT TGGGGACATCGTTAGAAAATCCCAGGAAGTGATCCCACCTGAATTTAATTCAAAACCATAA
Upstream 100 bases:
>100_bases CTAAATCCGATTTCGGAATCCCCAATCATGAAAAAAATAGCTGACTGAAATCTCCTTTTTTGAGAAACTCTAAGTCCCCT TTTGGTTCGGTAATAAAAAA
Downstream 100 bases:
>100_bases GGATTTTCACTTGCCACATTGATGAATTTGGTTCTAATTCTGTCACCATGGTTCTTTCCACATTTTTAACCGATTTATTT TTGTCCTTAGTTTCGCTCTC
Product: putative two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MNFSSKDPNLNNSLKNQNYLLILRQMETLGKLGHWEFDFINQTLFWSEGVYIILEMDPSSMPVSLELGYNSVHPDDREKA KQHMEDVITKGIPYNLECRLLTTKGTIKYIHSQADVIRDESGLPIQIVGIFQDITERTEAYIQLKQQEVRLSSILQSEPE CVKVVSPDGILIEMNPAGLSMIEADCPEEAIGQKVESLIDPADLKFYQNIHDNALKGIKSSARFRIIGMKGTHRWMESTS VPLTNQKGEITSVLSLTRDISEKVTNEEKLIRIKRNQEALINSTSDLIWSIDTQYCLVAANKTFLDVLSFLQKVPAKEGD SVLVKTAGEEFYYKWKEYYERGLSGESFRTYENFISPITHEEEHREVSFNPIRNIDEKITGLACFSKDITSLMRKSKELL LNEKRFRALVENGADVIMILNPRGQGKYVSPSIKKVMGYTETEAMNLSLFDVIHPDDAPRLKKRLFEVLALPLGASLQSQ TFRAKHKDGSWRYVESTLTNMLSDESIGGIVDNFHDVTEKETQMEAIQTQNQKLKTIAWTQSHVVRSPLARIMGIIELIR TGSLTKEEEEKSLRYLLESANELDDVIGDIVRKSQEVIPPEFNSKP
Sequences:
>Translated_606_residues MNFSSKDPNLNNSLKNQNYLLILRQMETLGKLGHWEFDFINQTLFWSEGVYIILEMDPSSMPVSLELGYNSVHPDDREKA KQHMEDVITKGIPYNLECRLLTTKGTIKYIHSQADVIRDESGLPIQIVGIFQDITERTEAYIQLKQQEVRLSSILQSEPE CVKVVSPDGILIEMNPAGLSMIEADCPEEAIGQKVESLIDPADLKFYQNIHDNALKGIKSSARFRIIGMKGTHRWMESTS VPLTNQKGEITSVLSLTRDISEKVTNEEKLIRIKRNQEALINSTSDLIWSIDTQYCLVAANKTFLDVLSFLQKVPAKEGD SVLVKTAGEEFYYKWKEYYERGLSGESFRTYENFISPITHEEEHREVSFNPIRNIDEKITGLACFSKDITSLMRKSKELL LNEKRFRALVENGADVIMILNPRGQGKYVSPSIKKVMGYTETEAMNLSLFDVIHPDDAPRLKKRLFEVLALPLGASLQSQ TFRAKHKDGSWRYVESTLTNMLSDESIGGIVDNFHDVTEKETQMEAIQTQNQKLKTIAWTQSHVVRSPLARIMGIIELIR TGSLTKEEEEKSLRYLLESANELDDVIGDIVRKSQEVIPPEFNSKP >Mature_606_residues MNFSSKDPNLNNSLKNQNYLLILRQMETLGKLGHWEFDFINQTLFWSEGVYIILEMDPSSMPVSLELGYNSVHPDDREKA KQHMEDVITKGIPYNLECRLLTTKGTIKYIHSQADVIRDESGLPIQIVGIFQDITERTEAYIQLKQQEVRLSSILQSEPE CVKVVSPDGILIEMNPAGLSMIEADCPEEAIGQKVESLIDPADLKFYQNIHDNALKGIKSSARFRIIGMKGTHRWMESTS VPLTNQKGEITSVLSLTRDISEKVTNEEKLIRIKRNQEALINSTSDLIWSIDTQYCLVAANKTFLDVLSFLQKVPAKEGD SVLVKTAGEEFYYKWKEYYERGLSGESFRTYENFISPITHEEEHREVSFNPIRNIDEKITGLACFSKDITSLMRKSKELL LNEKRFRALVENGADVIMILNPRGQGKYVSPSIKKVMGYTETEAMNLSLFDVIHPDDAPRLKKRLFEVLALPLGASLQSQ TFRAKHKDGSWRYVESTLTNMLSDESIGGIVDNFHDVTEKETQMEAIQTQNQKLKTIAWTQSHVVRSPLARIMGIIELIR TGSLTKEEEEKSLRYLLESANELDDVIGDIVRKSQEVIPPEFNSKP
Specific function: Putative oxygen sensor; modulates the activity of fixJ, a transcriptional activator of nitrogen fixation fixK gene. FixL probably acts as a kinase that phosphorylates fixJ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 69023; Mature: 69023
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSSKDPNLNNSLKNQNYLLILRQMETLGKLGHWEFDFINQTLFWSEGVYIILEMDPSS CCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCCHHHHCCEEEECCCEEEEEEECCCC MPVSLELGYNSVHPDDREKAKQHMEDVITKGIPYNLECRLLTTKGTIKYIHSQADVIRDE CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC SGLPIQIVGIFQDITERTEAYIQLKQQEVRLSSILQSEPECVKVVSPDGILIEMNPAGLS CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCE MIEADCPEEAIGQKVESLIDPADLKFYQNIHDNALKGIKSSARFRIIGMKGTHRWMESTS EEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCC VPLTNQKGEITSVLSLTRDISEKVTNEEKLIRIKRNQEALINSTSDLIWSIDTQYCLVAA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHCCCCCEEEEECCCEEEEEC NKTFLDVLSFLQKVPAKEGDSVLVKTAGEEFYYKWKEYYERGLSGESFRTYENFISPITH CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC EEEHREVSFNPIRNIDEKITGLACFSKDITSLMRKSKELLLNEKRFRALVENGADVIMIL CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE NPRGQGKYVSPSIKKVMGYTETEAMNLSLFDVIHPDDAPRLKKRLFEVLALPLGASLQSQ CCCCCCCCCCHHHHHHHCCCCHHEECEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH TFRAKHKDGSWRYVESTLTNMLSDESIGGIVDNFHDVTEKETQMEAIQTQNQKLKTIAWT HHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH QSHVVRSPLARIMGIIELIRTGSLTKEEEEKSLRYLLESANELDDVIGDIVRKSQEVIPP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFNSKP CCCCCC >Mature Secondary Structure MNFSSKDPNLNNSLKNQNYLLILRQMETLGKLGHWEFDFINQTLFWSEGVYIILEMDPSS CCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCCHHHHCCEEEECCCEEEEEEECCCC MPVSLELGYNSVHPDDREKAKQHMEDVITKGIPYNLECRLLTTKGTIKYIHSQADVIRDE CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC SGLPIQIVGIFQDITERTEAYIQLKQQEVRLSSILQSEPECVKVVSPDGILIEMNPAGLS CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCE MIEADCPEEAIGQKVESLIDPADLKFYQNIHDNALKGIKSSARFRIIGMKGTHRWMESTS EEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCC VPLTNQKGEITSVLSLTRDISEKVTNEEKLIRIKRNQEALINSTSDLIWSIDTQYCLVAA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHCCCCCEEEEECCCEEEEEC NKTFLDVLSFLQKVPAKEGDSVLVKTAGEEFYYKWKEYYERGLSGESFRTYENFISPITH CHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC EEEHREVSFNPIRNIDEKITGLACFSKDITSLMRKSKELLLNEKRFRALVENGADVIMIL CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE NPRGQGKYVSPSIKKVMGYTETEAMNLSLFDVIHPDDAPRLKKRLFEVLALPLGASLQSQ CCCCCCCCCCHHHHHHHCCCCHHEECEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH TFRAKHKDGSWRYVESTLTNMLSDESIGGIVDNFHDVTEKETQMEAIQTQNQKLKTIAWT HHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH QSHVVRSPLARIMGIIELIRTGSLTKEEEEKSLRYLLESANELDDVIGDIVRKSQEVIPP HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EFNSKP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2000090; 12597275; 9860942; 10747783 [H]