Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222226
Identifier: 183222226
GI number: 183222226
Start: 2969877
End: 2970464
Strand: Reverse
Name: 183222226
Synonym: LEPBI_I2877
Alternate gene names: NA
Gene position: 2970464-2969877 (Counterclockwise)
Preceding gene: 183222227
Following gene: 183222225
Centisome position: 82.52
GC content: 42.35
Gene sequence:
>588_bases ATGGTTCTTTCCACATTTTTAACCGATTTATTTTTGTCCTTAGTTTCGCTCTCGGTGGCGTATCGTTTTGTCGGCAAATC AGCAATCCCATCACGTTCCGCTTTGTATGGATTTGCCATCATTGGTATCTCCGCAGGTCTTGGCGCCGTTCATTTTTTAG GCTTTCATGCCTTGGATGATATCTATCGTTTTTTTGTTGGACTTGCGGGTTGTTTAGGAGTGCCACTCCTTGGACTTGCT TTTTTTCATTTTTCATTTCGATCCATTTCGGAAAAAACTTTTTTCCTCTTCATCGGGGTCTTGTTTGGTTTGTATTTGGT TTTTTCTTACGTTGCTCCTTTACCAATTTACTCGACAGTCGTCGGTGGGATTGCAATGGCGATTGTCCTCCTTAGCTCCA TCATTCGATTTCCGAAACATGCGAATGCGGCGATCCTAGGCATTGTTGGCGCAGTTCTCTTCATTCTTGCAGGTTTAGTC ATCGGTACAAAAGGTTCCACCGGTCCAATCCTGAACGTTGATATCTTTCATGTCTTACTTGCCATTGCCAATTATTGTAT CGGACAAGGAATTTCAAAATTAAGCTAG
Upstream 100 bases:
>100_bases TCGTTAGAAAATCCCAGGAAGTGATCCCACCTGAATTTAATTCAAAACCATAAGGATTTTCACTTGCCACATTGATGAAT TTGGTTCTAATTCTGTCACC
Downstream 100 bases:
>100_bases AACAATATCGATCCATCCTACATGTTAACTCTGAACCGATATGGCAACATCTCCTTCAGAGTCTACATTAGAAAAAATTC TCAAAATCCAAACTGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVLSTFLTDLFLSLVSLSVAYRFVGKSAIPSRSALYGFAIIGISAGLGAVHFLGFHALDDIYRFFVGLAGCLGVPLLGLA FFHFSFRSISEKTFFLFIGVLFGLYLVFSYVAPLPIYSTVVGGIAMAIVLLSSIIRFPKHANAAILGIVGAVLFILAGLV IGTKGSTGPILNVDIFHVLLAIANYCIGQGISKLS
Sequences:
>Translated_195_residues MVLSTFLTDLFLSLVSLSVAYRFVGKSAIPSRSALYGFAIIGISAGLGAVHFLGFHALDDIYRFFVGLAGCLGVPLLGLA FFHFSFRSISEKTFFLFIGVLFGLYLVFSYVAPLPIYSTVVGGIAMAIVLLSSIIRFPKHANAAILGIVGAVLFILAGLV IGTKGSTGPILNVDIFHVLLAIANYCIGQGISKLS >Mature_195_residues MVLSTFLTDLFLSLVSLSVAYRFVGKSAIPSRSALYGFAIIGISAGLGAVHFLGFHALDDIYRFFVGLAGCLGVPLLGLA FFHFSFRSISEKTFFLFIGVLFGLYLVFSYVAPLPIYSTVVGGIAMAIVLLSSIIRFPKHANAAILGIVGAVLFILAGLV IGTKGSTGPILNVDIFHVLLAIANYCIGQGISKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20658; Mature: 20658
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSTFLTDLFLSLVSLSVAYRFVGKSAIPSRSALYGFAIIGISAGLGAVHFLGFHALDD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYRFFVGLAGCLGVPLLGLAFFHFSFRSISEKTFFLFIGVLFGLYLVFSYVAPLPIYSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VGGIAMAIVLLSSIIRFPKHANAAILGIVGAVLFILAGLVIGTKGSTGPILNVDIFHVLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH AIANYCIGQGISKLS HHHHHHHHCCHHHCC >Mature Secondary Structure MVLSTFLTDLFLSLVSLSVAYRFVGKSAIPSRSALYGFAIIGISAGLGAVHFLGFHALDD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYRFFVGLAGCLGVPLLGLAFFHFSFRSISEKTFFLFIGVLFGLYLVFSYVAPLPIYSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VGGIAMAIVLLSSIIRFPKHANAAILGIVGAVLFILAGLVIGTKGSTGPILNVDIFHVLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH AIANYCIGQGISKLS HHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA