| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222210
Identifier: 183222210
GI number: 183222210
Start: 2952543
End: 2953226
Strand: Reverse
Name: 183222210
Synonym: LEPBI_I2861
Alternate gene names: NA
Gene position: 2953226-2952543 (Counterclockwise)
Preceding gene: 183222213
Following gene: 183222209
Centisome position: 82.04
GC content: 40.2
Gene sequence:
>684_bases TTGGGGCATGGGGGTCAGATGTCAAGGGAAAGTTCGAAAACGGGCTTTACAGACGTTCTCCTAGTCCAAACCATGGGGAT TGCCGTCCAATTTATGGGATTTATGAAAGCCTCCCTCATTTTAATTACTAGTTTATGTCTCATTAGTTGCGCCCCAGCGA AATCTTCGTATTTCGGAGAAGGGACGTTTGTCGGTGTTACACCAAGCGGAGAAGAGATTCGCTTCGCCAACTTGGGAAAA GACCAAATTGCTTTGAATGTATACTCACCTGATTGTGTGCCATGTTGGAAAGAAATCCCAGCACTCAATCTTTTACATGC AGAAATCCAAAACAAGTTTCCAAACAAAGCACTGTTTATGGTCGTGGATCCCTATCAAATTGTCCCTGATGTCACCGACG AACTTCCGTTTGGACAAGTATATCAGTTGGCGAAAGATAGGATGAATCTTGAAATCAAAAATAGAAATATCCAAGTACCA ATTGTTTTTATGAAAAAACCATTTCGAGTGAAAGAAGGTGGACTTGTGACAGGAACCCCCGAAACACTTTTGTTCGAAAC AAACCCCCTTCGATTGTATTATAATTTTTTAGGATCCATTTCAGAACTCACGAACAAAGAGGAGATTCAAAAAGATTCGA AGTTTCAATTTTTCCGTTATCAATTTGGTATGGAATCAATATGA
Upstream 100 bases:
>100_bases CCGGCAAAGTTCTATTAAGGATACGATATCAAAGTCTTCTTTATGTGATTGGGTCATTTTTTATAAATTCCTGGGGAAGT GAGTGGAACGTTAGACCAGA
Downstream 100 bases:
>100_bases GAGCAGTTATCATTCGATTCATTGATTGTGAAGGCCCTGGCATTCTTGAACCAATCTTAAGAGAAAAGGGATATCGTATC AGTTACCAAAACGCATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGHGGQMSRESSKTGFTDVLLVQTMGIAVQFMGFMKASLILITSLCLISCAPAKSSYFGEGTFVGVTPSGEEIRFANLGK DQIALNVYSPDCVPCWKEIPALNLLHAEIQNKFPNKALFMVVDPYQIVPDVTDELPFGQVYQLAKDRMNLEIKNRNIQVP IVFMKKPFRVKEGGLVTGTPETLLFETNPLRLYYNFLGSISELTNKEEIQKDSKFQFFRYQFGMESI
Sequences:
>Translated_227_residues MGHGGQMSRESSKTGFTDVLLVQTMGIAVQFMGFMKASLILITSLCLISCAPAKSSYFGEGTFVGVTPSGEEIRFANLGK DQIALNVYSPDCVPCWKEIPALNLLHAEIQNKFPNKALFMVVDPYQIVPDVTDELPFGQVYQLAKDRMNLEIKNRNIQVP IVFMKKPFRVKEGGLVTGTPETLLFETNPLRLYYNFLGSISELTNKEEIQKDSKFQFFRYQFGMESI >Mature_226_residues GHGGQMSRESSKTGFTDVLLVQTMGIAVQFMGFMKASLILITSLCLISCAPAKSSYFGEGTFVGVTPSGEEIRFANLGKD QIALNVYSPDCVPCWKEIPALNLLHAEIQNKFPNKALFMVVDPYQIVPDVTDELPFGQVYQLAKDRMNLEIKNRNIQVPI VFMKKPFRVKEGGLVTGTPETLLFETNPLRLYYNFLGSISELTNKEEIQKDSKFQFFRYQFGMESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25531; Mature: 25400
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHGGQMSRESSKTGFTDVLLVQTMGIAVQFMGFMKASLILITSLCLISCAPAKSSYFGE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GTFVGVTPSGEEIRFANLGKDQIALNVYSPDCVPCWKEIPALNLLHAEIQNKFPNKALFM CEEEEECCCCCEEEEEECCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEE VVDPYQIVPDVTDELPFGQVYQLAKDRMNLEIKNRNIQVPIVFMKKPFRVKEGGLVTGTP EECCHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCEEEEEEEEECCCCEECCCCEEECCC ETLLFETNPLRLYYNFLGSISELTNKEEIQKDSKFQFFRYQFGMESI CEEEEECCCCEEHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure GHGGQMSRESSKTGFTDVLLVQTMGIAVQFMGFMKASLILITSLCLISCAPAKSSYFGE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GTFVGVTPSGEEIRFANLGKDQIALNVYSPDCVPCWKEIPALNLLHAEIQNKFPNKALFM CEEEEECCCCCEEEEEECCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEE VVDPYQIVPDVTDELPFGQVYQLAKDRMNLEIKNRNIQVPIVFMKKPFRVKEGGLVTGTP EECCHHHCCCCCCCCCHHHHHHHHHHHCCEEECCCEEEEEEEEECCCCEECCCCEEECCC ETLLFETNPLRLYYNFLGSISELTNKEEIQKDSKFQFFRYQFGMESI CEEEEECCCCEEHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA