Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is yfeJ [H]

Identifier: 183222209

GI number: 183222209

Start: 2951857

End: 2952546

Strand: Reverse

Name: yfeJ [H]

Synonym: LEPBI_I2860

Alternate gene names: 183222209

Gene position: 2952546-2951857 (Counterclockwise)

Preceding gene: 183222210

Following gene: 183222208

Centisome position: 82.02

GC content: 36.67

Gene sequence:

>690_bases
ATGAGAGCAGTTATCATTCGATTCATTGATTGTGAAGGCCCTGGCATTCTTGAACCAATCTTAAGAGAAAAGGGATATCG
TATCAGTTACCAAAACGCATTTGATTCTCGTGTGCAACTGATGCCAGAAATACATTTAAACTTTGATTTGATCATCATGT
TAGGTGGTCCTCAGTCTGTTGCTGATCCAGATGAACAGGAATTTTTTAAACCATACTATGAAATCGTGGAAAATGTTGCG
GTGTTGCCAAACAAAAAGTTAATCGGTATTTGTTTGGGTTCACAGATCATTGCACGTGCATTAGGTGCCAATGTTCGGCC
TGGAACAAAAGGCCCAGAAACAGGATTTTCCGATTTACAAATCCTGAAACCAGAGCATCCGATTTTTTCTGGGTTGAATG
GAGATTCCCTTTTAGCATTCCATTTACATGAAGATATATTTGATATCCCTGTGGGAGCGGAACATCTCCTTGCAAGTGAG
TTTTATGCGAATCAAATGTTTTCTTATAAAAATAAGATTTTTGCATTCCAAACTCATTTAGAACCAACACTTGAAATGTT
ACATGTTTGGCAGAATGTTCATAAAGAATTTATCGCTAAAGGCACGGGCGATTTTTCGAACCTGAAATCTAAACAAAAGA
CGATGGAAGAAAGTGCCAAAATATTATTTCGCAATATTATAAATTTATAA

Upstream 100 bases:

>100_bases
ATAATTTTTTAGGATCCATTTCAGAACTCACGAACAAAGAGGAGATTCAAAAAGATTCGAAGTTTCAATTTTTCCGTTAT
CAATTTGGTATGGAATCAAT

Downstream 100 bases:

>100_bases
CGGACAAAACATGTTTCAAAAAATCTTAACCATATTATTCGGCAGTAAATACGAAAGAGACCTAAAAAGACTTAACCCAA
TTGTTGAAACAATCAATTCA

Product: putative glutamine amidotransferase, class-I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRAVIIRFIDCEGPGILEPILREKGYRISYQNAFDSRVQLMPEIHLNFDLIIMLGGPQSVADPDEQEFFKPYYEIVENVA
VLPNKKLIGICLGSQIIARALGANVRPGTKGPETGFSDLQILKPEHPIFSGLNGDSLLAFHLHEDIFDIPVGAEHLLASE
FYANQMFSYKNKIFAFQTHLEPTLEMLHVWQNVHKEFIAKGTGDFSNLKSKQKTMEESAKILFRNIINL

Sequences:

>Translated_229_residues
MRAVIIRFIDCEGPGILEPILREKGYRISYQNAFDSRVQLMPEIHLNFDLIIMLGGPQSVADPDEQEFFKPYYEIVENVA
VLPNKKLIGICLGSQIIARALGANVRPGTKGPETGFSDLQILKPEHPIFSGLNGDSLLAFHLHEDIFDIPVGAEHLLASE
FYANQMFSYKNKIFAFQTHLEPTLEMLHVWQNVHKEFIAKGTGDFSNLKSKQKTMEESAKILFRNIINL
>Mature_229_residues
MRAVIIRFIDCEGPGILEPILREKGYRISYQNAFDSRVQLMPEIHLNFDLIIMLGGPQSVADPDEQEFFKPYYEIVENVA
VLPNKKLIGICLGSQIIARALGANVRPGTKGPETGFSDLQILKPEHPIFSGLNGDSLLAFHLHEDIFDIPVGAEHLLASE
FYANQMFSYKNKIFAFQTHLEPTLEMLHVWQNVHKEFIAKGTGDFSNLKSKQKTMEESAKILFRNIINL

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 25930; Mature: 25930

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVIIRFIDCEGPGILEPILREKGYRISYQNAFDSRVQLMPEIHLNFDLIIMLGGPQSV
CCEEEEEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHCCEEECCEEEEEEECCCCCC
ADPDEQEFFKPYYEIVENVAVLPNKKLIGICLGSQIIARALGANVRPGTKGPETGFSDLQ
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
ILKPEHPIFSGLNGDSLLAFHLHEDIFDIPVGAEHLLASEFYANQMFSYKNKIFAFQTHL
EECCCCCHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCC
EPTLEMLHVWQNVHKEFIAKGTGDFSNLKSKQKTMEESAKILFRNIINL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAVIIRFIDCEGPGILEPILREKGYRISYQNAFDSRVQLMPEIHLNFDLIIMLGGPQSV
CCEEEEEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHCCEEECCEEEEEEECCCCCC
ADPDEQEFFKPYYEIVENVAVLPNKKLIGICLGSQIIARALGANVRPGTKGPETGFSDLQ
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
ILKPEHPIFSGLNGDSLLAFHLHEDIFDIPVGAEHLLASEFYANQMFSYKNKIFAFQTHL
EECCCCCHHCCCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCC
EPTLEMLHVWQNVHKEFIAKGTGDFSNLKSKQKTMEESAKILFRNIINL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]