| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yesF [H]
Identifier: 183221854
GI number: 183221854
Start: 2571194
End: 2572024
Strand: Reverse
Name: yesF [H]
Synonym: LEPBI_I2487
Alternate gene names: 183221854
Gene position: 2572024-2571194 (Counterclockwise)
Preceding gene: 183221855
Following gene: 183221852
Centisome position: 71.45
GC content: 37.67
Gene sequence:
>831_bases TTGGGCATGAAACCATTAAATTTAATTTTAGGATCTAGCGGAAAAACGGGATCGAGAATTGTAAACAAATTGAACCAACT TGATGTTCCCATCCGATTGGGATCAAGAAAGTCATCGCCTTCTTTTGATTGGCAGAAACCTGAGACGTGGGCTCCAATCA TCAGTGGAGTGGATCATATTTATATCTCGTACCAACCTGATTTAGCCGTTCCAAATTCGATTCATGACATCCAAAAACTT TTAGAAATTGCAAATCAATTCAAGGTGAAACGTATTGTTCTTCTTTCCGGAAGGGGTGAACCGGAAGCAATCGCCTGCGA AACGTTAGTTGAGAATTCAGGAATGGAATGGACCATTTTGCGATCCAGTTGGTTTTCTCAGAATTTTAGTGAAGGTATGT TCCTCGGCCAAATATTAGAAAGAAAGGTTGTTTTTCCGAAATTGAATGCACGTGAACCGTTTATTGATTTGGATGACCTA ACGGATCTTGCTGTTGATGCATTAGTGAATGAGAAACATATTGGAAAACGATATGAATTGACTGGACCAGAACTTCTGAG TTTTCAGGATGCATTTGGATGTATCGCAAAAGAATTAAATGAATCCATTCCGTTTGAAGAAATTCCCTTAGATGAATATA TAGCAATGTTAGGTGAATTTGGCCTGGACCAAAAAACAATTTGGCTCATTCAGTATTTGTTTGAAACGGTTTTGGATGGA AGAAACGAGTCCGTTCTGAATGATTTTGAAAGGGCTATGGGTAAAAAACCAAAAAATTTTCAAAGTTATGTAAAGGAAAC AATGGAATCGGGAGTTTGGAATTTACCATAA
Upstream 100 bases:
>100_bases AATTTAAGTCGTTTACCAAAGAAAAACCTTTCCAATTCAGAGAAAAAAAAGGAAACATGTCGGGTTCGTCCAATTTTTAA ATATTGATCTTTGTTATTCT
Downstream 100 bases:
>100_bases ATGTAGTTGGATTTTTTTTAAGATCTAGGATGGAACCACCAATTCGTAAATTTGAATCGGTGGTTTTCTCTTTTGAAAAC GAATTTGGAAATCAAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGMKPLNLILGSSGKTGSRIVNKLNQLDVPIRLGSRKSSPSFDWQKPETWAPIISGVDHIYISYQPDLAVPNSIHDIQKL LEIANQFKVKRIVLLSGRGEPEAIACETLVENSGMEWTILRSSWFSQNFSEGMFLGQILERKVVFPKLNAREPFIDLDDL TDLAVDALVNEKHIGKRYELTGPELLSFQDAFGCIAKELNESIPFEEIPLDEYIAMLGEFGLDQKTIWLIQYLFETVLDG RNESVLNDFERAMGKKPKNFQSYVKETMESGVWNLP
Sequences:
>Translated_276_residues MGMKPLNLILGSSGKTGSRIVNKLNQLDVPIRLGSRKSSPSFDWQKPETWAPIISGVDHIYISYQPDLAVPNSIHDIQKL LEIANQFKVKRIVLLSGRGEPEAIACETLVENSGMEWTILRSSWFSQNFSEGMFLGQILERKVVFPKLNAREPFIDLDDL TDLAVDALVNEKHIGKRYELTGPELLSFQDAFGCIAKELNESIPFEEIPLDEYIAMLGEFGLDQKTIWLIQYLFETVLDG RNESVLNDFERAMGKKPKNFQSYVKETMESGVWNLP >Mature_275_residues GMKPLNLILGSSGKTGSRIVNKLNQLDVPIRLGSRKSSPSFDWQKPETWAPIISGVDHIYISYQPDLAVPNSIHDIQKLL EIANQFKVKRIVLLSGRGEPEAIACETLVENSGMEWTILRSSWFSQNFSEGMFLGQILERKVVFPKLNAREPFIDLDDLT DLAVDALVNEKHIGKRYELTGPELLSFQDAFGCIAKELNESIPFEEIPLDEYIAMLGEFGLDQKTIWLIQYLFETVLDGR NESVLNDFERAMGKKPKNFQSYVKETMESGVWNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NmrA-type oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: NA
Molecular weight: Translated: 31298; Mature: 31167
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMKPLNLILGSSGKTGSRIVNKLNQLDVPIRLGSRKSSPSFDWQKPETWAPIISGVDHI CCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCEE YISYQPDLAVPNSIHDIQKLLEIANQFKVKRIVLLSGRGEPEAIACETLVENSGMEWTIL EEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEE RSSWFSQNFSEGMFLGQILERKVVFPKLNAREPFIDLDDLTDLAVDALVNEKHIGKRYEL ECHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEC TGPELLSFQDAFGCIAKELNESIPFEEIPLDEYIAMLGEFGLDQKTIWLIQYLFETVLDG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC RNESVLNDFERAMGKKPKNFQSYVKETMESGVWNLP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GMKPLNLILGSSGKTGSRIVNKLNQLDVPIRLGSRKSSPSFDWQKPETWAPIISGVDHI CCCCCCCEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCEE YISYQPDLAVPNSIHDIQKLLEIANQFKVKRIVLLSGRGEPEAIACETLVENSGMEWTIL EEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEE RSSWFSQNFSEGMFLGQILERKVVFPKLNAREPFIDLDDLTDLAVDALVNEKHIGKRYEL ECHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEC TGPELLSFQDAFGCIAKELNESIPFEEIPLDEYIAMLGEFGLDQKTIWLIQYLFETVLDG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC RNESVLNDFERAMGKKPKNFQSYVKETMESGVWNLP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]