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The map label for this gene is yqfA [C]

Identifier: 183221845

GI number: 183221845

Start: 2559649

End: 2560377

Strand: Reverse

Name: yqfA [C]

Synonym: LEPBI_I2477

Alternate gene names: 183221845

Gene position: 2560377-2559649 (Counterclockwise)

Preceding gene: 183221846

Following gene: 183221843

Centisome position: 71.13

GC content: 42.94

Gene sequence:

>729_bases
ATGACTCCCATTCCCATCTCACCGATGGGAATTCCCAAGAGTCATTCTCATATCCAAGAGCTTATAGACACGGTCCATGA
GTATAGTATTGGGCATGAAATCGCCAACGCGGTGACTCATGGAATTGGTGGTGGTCTTAGTATCGCCGGTTTGTCCGTAT
TATTAACGATGGCGATTTTATATGGAGATGTATGGCATGTCGTTAGCTCAGCCATTTATGGTGCGACACTCATCATTTTG
TATTTGGCCTCTACTTTATACCATGGAATCTATCATACGGCTACCAAACGTATCTTTAAGGTGATTGACCATGCATCCAT
TTATCTCTTAATTGCTGGCACTTACACTCCTTTTACACTTGTTAGTTTGCGGGAAAATTCTGAATGGGGTTGGGTATTGT
TTAGTGTCATTTGGATCCTCGCATTCATTGGAGTGGCACTATTACTCCTCTTCCCTGGAAAGTACAGCGGTCTCCGTGTC
GTTGTTTACATCATCATGGGTTGGCTTGCCATTTTTGTGATGAAAGACATTCGTGCGGCTATCGGAGTGGGTGGGATGAC
TTGGTTAGTTGCGGGTGGCCTCAGTTATACGTTTGGTGTGATTTTTTATCTTTGGGATCGTTTGCCAATGAATCATGCGA
TTTGGCATCTCTTCGTGCTTTCAGGGAGTGTTTGTCATTTTTTTGCCATTTTGTTTTATGTGATTCCCTCGGTTCCAAAT
GTAAAATAA

Upstream 100 bases:

>100_bases
AAAAGCGAAACAAAAACCTTCCCCCAAAAAGAAGAAACAAAATTCATATCAAAAATCAAAAACAAAAAAAATTGACAAAG
AAAGCAATCATACGATCCAA

Downstream 100 bases:

>100_bases
TGTTTGTCAAAAAATTTACCTACCTTATGATTTTGTCTCTTGTCGGCCTTTCGAGGTTCGCAAGTAGGAGAATATATGAG
AACATTGGTCACGTTTAGTT

Product: putative hemolysin-III related protein

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTPIPISPMGIPKSHSHIQELIDTVHEYSIGHEIANAVTHGIGGGLSIAGLSVLLTMAILYGDVWHVVSSAIYGATLIIL
YLASTLYHGIYHTATKRIFKVIDHASIYLLIAGTYTPFTLVSLRENSEWGWVLFSVIWILAFIGVALLLLFPGKYSGLRV
VVYIIMGWLAIFVMKDIRAAIGVGGMTWLVAGGLSYTFGVIFYLWDRLPMNHAIWHLFVLSGSVCHFFAILFYVIPSVPN
VK

Sequences:

>Translated_242_residues
MTPIPISPMGIPKSHSHIQELIDTVHEYSIGHEIANAVTHGIGGGLSIAGLSVLLTMAILYGDVWHVVSSAIYGATLIIL
YLASTLYHGIYHTATKRIFKVIDHASIYLLIAGTYTPFTLVSLRENSEWGWVLFSVIWILAFIGVALLLLFPGKYSGLRV
VVYIIMGWLAIFVMKDIRAAIGVGGMTWLVAGGLSYTFGVIFYLWDRLPMNHAIWHLFVLSGSVCHFFAILFYVIPSVPN
VK
>Mature_241_residues
TPIPISPMGIPKSHSHIQELIDTVHEYSIGHEIANAVTHGIGGGLSIAGLSVLLTMAILYGDVWHVVSSAIYGATLIILY
LASTLYHGIYHTATKRIFKVIDHASIYLLIAGTYTPFTLVSLRENSEWGWVLFSVIWILAFIGVALLLLFPGKYSGLRVV
VYIIMGWLAIFVMKDIRAAIGVGGMTWLVAGGLSYTFGVIFYLWDRLPMNHAIWHLFVLSGSVCHFFAILFYVIPSVPNV
K

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=215, Percent_Identity=32.093023255814, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI154759277, Length=239, Percent_Identity=29.7071129707113, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI52630445, Length=209, Percent_Identity=31.1004784688995, Blast_Score=86, Evalue=2e-17,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=47.5961538461538, Blast_Score=176, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71996356, Length=224, Percent_Identity=32.5892857142857, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24640324, Length=234, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 26722; Mature: 26591

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIPISPMGIPKSHSHIQELIDTVHEYSIGHEIANAVTHGIGGGLSIAGLSVLLTMAIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YGDVWHVVSSAIYGATLIILYLASTLYHGIYHTATKRIFKVIDHASIYLLIAGTYTPFTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE
VSLRENSEWGWVLFSVIWILAFIGVALLLLFPGKYSGLRVVVYIIMGWLAIFVMKDIRAA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGVGGMTWLVAGGLSYTFGVIFYLWDRLPMNHAIWHLFVLSGSVCHFFAILFYVIPSVPN
HCCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
VK
CC
>Mature Secondary Structure 
TPIPISPMGIPKSHSHIQELIDTVHEYSIGHEIANAVTHGIGGGLSIAGLSVLLTMAIL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YGDVWHVVSSAIYGATLIILYLASTLYHGIYHTATKRIFKVIDHASIYLLIAGTYTPFTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE
VSLRENSEWGWVLFSVIWILAFIGVALLLLFPGKYSGLRVVVYIIMGWLAIFVMKDIRAA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGVGGMTWLVAGGLSYTFGVIFYLWDRLPMNHAIWHLFVLSGSVCHFFAILFYVIPSVPN
HCCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]