| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221835
Identifier: 183221835
GI number: 183221835
Start: 2547581
End: 2548789
Strand: Reverse
Name: 183221835
Synonym: LEPBI_I2466
Alternate gene names: NA
Gene position: 2548789-2547581 (Counterclockwise)
Preceding gene: 183221836
Following gene: 183221834
Centisome position: 70.81
GC content: 40.03
Gene sequence:
>1209_bases GTGTCCGCAGAAGATATCAAAATTGTCACATACTCCAAAGGGGCAGCCATAGTTGTCCAAAATTCCGTCAATACTGGAAA TTTTTTCATCGTAAAATCCGGACGTGTTTCGGTCGATTCAGAACACATTGTTGTCGACCATGAACTTGCCTATTATGAGG CGGGTGATAGTTTTGGACTCGTCTCAGCCTTAACAGAACATAGGTTCCTTGTCACTTTATTTGCAGATACAGATGTGGAA CTTGTTCAGATTCCCATTCGACTTTTGGGTTCTTACCTAAAAGAAAGAAAGGAATTGGCGATGAAGATTTTGGGGCTCTA TTCTCGTGAATTAAGGACCCTTCAAAAACATTTATCCAAGGCAAACAAACCTGCTGACAGAGATTACCATCCGGAACGTT TGGTTCAGAATGCACGCACCTATCTCACCTGGCAAAAACCTAATCTCGCTGCCTATTCTTTACAAGCATTCTTAAAATGG TCAAAAGAGAACCAATCGACAGAGAATTTAACGGAGGCAATGGATTTGTTTCAATCCGTTGCTTCTTCATTTAAACCGTT TCATTGGGATAACGTCCAATCTACTTTGGAAGCTGGTGAAGTTCTTTTTGTGGAAAGCGAAAAGAGTAATGAAATCTATG TCGTGTTAGAGGGAAACGTAAAACTTTTTGGGATTGTGCGAGGATTTGAGTATGTGATCGATGTTTTGGGTCCAGGGGAA ATTTTTGGTGAAATGTCACTCATTGACAATGCTCCCAGAATGGCATCTGCCATCACGGAAACAAAATCAAAAATCTTACG TGTGACTCCGGAAAATTTATTTGAGTCAGTTGGGCCTTCATTATTACAAAAGATTTTTGAAAGTATCGCGCGCCGAATTT GGTTTTCCCACCAAAGGCTAGTCATCTTACGACTGAAAACCCCAGTCACAAGACTTTATGCTTACCTTTATAACTCGATC CGCGACCAAGACATTCGGTTGGGTCGGAATTTGGATTTAAGCCTTTCGACTCCTCATACAATTTACATCCAAATGGAAGA ACTTTGTAATATGTGTGGGATCATCAAGTTAAAACAAGAGAGTATTGATGAATTCAAAGCAGATACAAACCTTGTCATTG AATCCAATCGGATCACGATCAAAAGTAGAAAGCGACTAGAGGAAAAATTGGGTCATTTCAAATCCAAAGAAGGACAAATT GTTGCCTAA
Upstream 100 bases:
>100_bases ATATTTCTGCTATAAAAGTGTACGATTTCATTTGGGATCAGATGACTTCGGAGATTTAAATGTTTGACTCGTACCTTTAA AAATCATTATTTTTAATTCA
Downstream 100 bases:
>100_bases TCCATTTAAAATTTGTATCATTTTTTCACTAGTTGTGATTTAGTTCTGTGATGAAAAAATTTTTCATGTATTCCCTTGCC ATTTTTTATATAGTCGCCGG
Product: putative cAMP-binding protein
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Catabolite Gene Activator
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSAEDIKIVTYSKGAAIVVQNSVNTGNFFIVKSGRVSVDSEHIVVDHELAYYEAGDSFGLVSALTEHRFLVTLFADTDVE LVQIPIRLLGSYLKERKELAMKILGLYSRELRTLQKHLSKANKPADRDYHPERLVQNARTYLTWQKPNLAAYSLQAFLKW SKENQSTENLTEAMDLFQSVASSFKPFHWDNVQSTLEAGEVLFVESEKSNEIYVVLEGNVKLFGIVRGFEYVIDVLGPGE IFGEMSLIDNAPRMASAITETKSKILRVTPENLFESVGPSLLQKIFESIARRIWFSHQRLVILRLKTPVTRLYAYLYNSI RDQDIRLGRNLDLSLSTPHTIYIQMEELCNMCGIIKLKQESIDEFKADTNLVIESNRITIKSRKRLEEKLGHFKSKEGQI VA
Sequences:
>Translated_402_residues MSAEDIKIVTYSKGAAIVVQNSVNTGNFFIVKSGRVSVDSEHIVVDHELAYYEAGDSFGLVSALTEHRFLVTLFADTDVE LVQIPIRLLGSYLKERKELAMKILGLYSRELRTLQKHLSKANKPADRDYHPERLVQNARTYLTWQKPNLAAYSLQAFLKW SKENQSTENLTEAMDLFQSVASSFKPFHWDNVQSTLEAGEVLFVESEKSNEIYVVLEGNVKLFGIVRGFEYVIDVLGPGE IFGEMSLIDNAPRMASAITETKSKILRVTPENLFESVGPSLLQKIFESIARRIWFSHQRLVILRLKTPVTRLYAYLYNSI RDQDIRLGRNLDLSLSTPHTIYIQMEELCNMCGIIKLKQESIDEFKADTNLVIESNRITIKSRKRLEEKLGHFKSKEGQI VA >Mature_401_residues SAEDIKIVTYSKGAAIVVQNSVNTGNFFIVKSGRVSVDSEHIVVDHELAYYEAGDSFGLVSALTEHRFLVTLFADTDVEL VQIPIRLLGSYLKERKELAMKILGLYSRELRTLQKHLSKANKPADRDYHPERLVQNARTYLTWQKPNLAAYSLQAFLKWS KENQSTENLTEAMDLFQSVASSFKPFHWDNVQSTLEAGEVLFVESEKSNEIYVVLEGNVKLFGIVRGFEYVIDVLGPGEI FGEMSLIDNAPRMASAITETKSKILRVTPENLFESVGPSLLQKIFESIARRIWFSHQRLVILRLKTPVTRLYAYLYNSIR DQDIRLGRNLDLSLSTPHTIYIQMEELCNMCGIIKLKQESIDEFKADTNLVIESNRITIKSRKRLEEKLGHFKSKEGQIV A
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45846; Mature: 45715
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEDIKIVTYSKGAAIVVQNSVNTGNFFIVKSGRVSVDSEHIVVDHELAYYEAGDSFGL CCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCEEEECCCEEEEECEEEEEECCCCCHH VSALTEHRFLVTLFADTDVELVQIPIRLLGSYLKERKELAMKILGLYSRELRTLQKHLSK HHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANKPADRDYHPERLVQNARTYLTWQKPNLAAYSLQAFLKWSKENQSTENLTEAMDLFQSV CCCCCCCCCCHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASSFKPFHWDNVQSTLEAGEVLFVESEKSNEIYVVLEGNVKLFGIVRGFEYVIDVLGPGE HHHCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHCCCHH IFGEMSLIDNAPRMASAITETKSKILRVTPENLFESVGPSLLQKIFESIARRIWFSHQRL HHHHHHHHCCCHHHHHHHHHHHHHEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE VILRLKTPVTRLYAYLYNSIRDQDIRLGRNLDLSLSTPHTIYIQMEELCNMCGIIKLKQE EEEEECCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCEEEEEEHHHHHHHHCEEEECHH SIDEFKADTNLVIESNRITIKSRKRLEEKLGHFKSKEGQIVA HHHHHCCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCCCEEC >Mature Secondary Structure SAEDIKIVTYSKGAAIVVQNSVNTGNFFIVKSGRVSVDSEHIVVDHELAYYEAGDSFGL CCCCEEEEEECCCEEEEEECCCCCCCEEEEECCEEEECCCEEEEECEEEEEECCCCCHH VSALTEHRFLVTLFADTDVELVQIPIRLLGSYLKERKELAMKILGLYSRELRTLQKHLSK HHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANKPADRDYHPERLVQNARTYLTWQKPNLAAYSLQAFLKWSKENQSTENLTEAMDLFQSV CCCCCCCCCCHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ASSFKPFHWDNVQSTLEAGEVLFVESEKSNEIYVVLEGNVKLFGIVRGFEYVIDVLGPGE HHHCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEEECCEEEEEEHHHHHHHHHHCCCHH IFGEMSLIDNAPRMASAITETKSKILRVTPENLFESVGPSLLQKIFESIARRIWFSHQRL HHHHHHHHCCCHHHHHHHHHHHHHEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE VILRLKTPVTRLYAYLYNSIRDQDIRLGRNLDLSLSTPHTIYIQMEELCNMCGIIKLKQE EEEEECCCHHHHHHHHHHHHCCCHHHCCCCCEEEECCCEEEEEEHHHHHHHHCEEEECHH SIDEFKADTNLVIESNRITIKSRKRLEEKLGHFKSKEGQIVA HHHHHCCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA