| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221834
Identifier: 183221834
GI number: 183221834
Start: 2547150
End: 2547533
Strand: Reverse
Name: 183221834
Synonym: LEPBI_I2465
Alternate gene names: NA
Gene position: 2547533-2547150 (Counterclockwise)
Preceding gene: 183221835
Following gene: 183221833
Centisome position: 70.77
GC content: 36.72
Gene sequence:
>384_bases GTGATGAAAAAATTTTTCATGTATTCCCTTGCCATTTTTTATATAGTCGCCGGCACCAATCATTTCCTCTCACCCGAATT TTATTTAGAAATGATGCCCGATTATTTACCCTTTCACGAATTACTCAATGTGACCAGTGGGCTTTCTGAAATCACGCTCG GTCTTTTAGTATTGTATGAACGAATGAGAAAATTGGCATGTTATGGAATTATTTTACTCTTACTTGCGATTTATCCTGCC AATATCAACATGCTACTCGAAGCCTTAGATGGTAAGGATTTTGGAGTCCCAATTTGGGCATTATATGTTCGATTGCCTTT TCAATTTTTGTTTATCTATTGGGCTTGGGTTGTACGCGATTTTAAATGGTCCGAATCAACTTAA
Upstream 100 bases:
>100_bases TAGAGGAAAAATTGGGTCATTTCAAATCCAAAGAAGGACAAATTGTTGCCTAATCCATTTAAAATTTGTATCATTTTTTC ACTAGTTGTGATTTAGTTCT
Downstream 100 bases:
>100_bases TTCAAAAACTAGGTTTAAGAGCGAATGACAAAAGAACTAAAACGAAAACCGAAAGAGACTACAAAAAAAAATGGTCAGTG GACGTTTTTATCCAATCATT
Product: putative lipoprotein involved in motility and chitin utilization
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MMKKFFMYSLAIFYIVAGTNHFLSPEFYLEMMPDYLPFHELLNVTSGLSEITLGLLVLYERMRKLACYGIILLLLAIYPA NINMLLEALDGKDFGVPIWALYVRLPFQFLFIYWAWVVRDFKWSEST
Sequences:
>Translated_127_residues MMKKFFMYSLAIFYIVAGTNHFLSPEFYLEMMPDYLPFHELLNVTSGLSEITLGLLVLYERMRKLACYGIILLLLAIYPA NINMLLEALDGKDFGVPIWALYVRLPFQFLFIYWAWVVRDFKWSEST >Mature_127_residues MMKKFFMYSLAIFYIVAGTNHFLSPEFYLEMMPDYLPFHELLNVTSGLSEITLGLLVLYERMRKLACYGIILLLLAIYPA NINMLLEALDGKDFGVPIWALYVRLPFQFLFIYWAWVVRDFKWSEST
Specific function: Unknown
COG id: COG4270
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14983; Mature: 14983
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKFFMYSLAIFYIVAGTNHFLSPEFYLEMMPDYLPFHELLNVTSGLSEITLGLLVLYE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RMRKLACYGIILLLLAIYPANINMLLEALDGKDFGVPIWALYVRLPFQFLFIYWAWVVRD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKWSEST CCCCCCC >Mature Secondary Structure MMKKFFMYSLAIFYIVAGTNHFLSPEFYLEMMPDYLPFHELLNVTSGLSEITLGLLVLYE CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RMRKLACYGIILLLLAIYPANINMLLEALDGKDFGVPIWALYVRLPFQFLFIYWAWVVRD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FKWSEST CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA