| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ttuD [H]
Identifier: 183221825
GI number: 183221825
Start: 2537719
End: 2538906
Strand: Reverse
Name: ttuD [H]
Synonym: LEPBI_I2456
Alternate gene names: 183221825
Gene position: 2538906-2537719 (Counterclockwise)
Preceding gene: 183221826
Following gene: 183221823
Centisome position: 70.53
GC content: 36.53
Gene sequence:
>1188_bases TTGAATTCACTCAAAGAAGAAATTTTGTATTTTTTTAGACTAGGGGTACATGCGGCGGACCCCAATTCCTTGTTTGAAGA TTTTTGGGAGGATCATTCGCTTTTACAGGAAACTTTCCATACTTCTAAAAAGAATTTGTTTGTCTTTTCAGTTGGAAAAG CCGCGTATCCCATGGCGATGTCATTTGTTCATGATTTCCCAATTAAAAATGGTTATATTCTCACAAAGTACGGACATTTA CCAACCGAAAAACAAATCATCCAAGAAGACTCAATTTGGAAGTATCGAGAAGCTTCCCATCCTATTCTTGATCAAAATTC AATCGATCATTCAAATGAAGTCTTAAATTTATTAAAACAATTAGGAAAAAACGATCGTTTGGTGGTTCTTCTCTCTGGTG GCGCATCTAGTTTGTTTGAAATACCTATCGAGGGTTATTCGTTAATTGATATGATCTCCATTCAAAAACGATTGTTAAAC AGTGGTAAATTCATTCATGAGATCAATTTAGAGAGAAAAAAGTCTTCCAAGGTAAAAGGAGGAAAACTTTTATCAGAGTT AAACTCAGAGTTAGAGGTGTATACGTTTGTGATCTCAGATGTCATTGGTGATGACCCATATACAATTGGTTCAGGGCCTA CGTATCCTAGTGAAAATTATTTCATTTTGGGAAACCTCACAAAATCAATTCAAACCATTATACATAAAGCAAAACAACTA GGATACCAAACGAAATGTATCAGTGATACTTGGACGGGTAGTGTTGAAGAAACATCATATTTGATTGAAAAAGAATTTTT GTCTGCAATCGAATCAAATACAAAACAAATGGTTCTAATCGGTGGTGAATTGGTTTGCCCTGTGAATGGAAATGGAGTGG GTGGAAGGAACCAAGAACTAGCCCTTCGGATAACCATCTTACTTGAAAAACACCAAGTCAATCGAAACTGGATGTTTTTA TCGGCTGGCACTGATGGTACGGATGGCCCGACAGATGCTGCGGGCGGTGTTGTTACGAACAATACAATTGCCTTGATGAA AGAAAAAAAATGGGATCCAATAGTTCAATTGGAAGATTCAAATTCTTATCCAATTCTAAAAGATGTAAATGCACTCGTTA TGACAGGACCCACTGGTACGAATGTCAATGACATATTAATCTTGTTAGTTGAAGGTTCGGAATCCTAG
Upstream 100 bases:
>100_bases TGTGTATCTCTTTGTCCTACTGATGTTCTACAATTTGGAAAATTGAATGGGAATCAGGTGACATTTGATTTGTTAGATGC CAAAATGCGGAAATAATAGT
Downstream 100 bases:
>100_bases ATTTGAATTCTGCCCACTCCAATAGATTTGGAACAACGGATTTTGCCATCTACTACTTCCAATTTTTGACGCTAATAACT CATCGTCGATTTGTTTTAGG
Product: putative hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNSLKEEILYFFRLGVHAADPNSLFEDFWEDHSLLQETFHTSKKNLFVFSVGKAAYPMAMSFVHDFPIKNGYILTKYGHL PTEKQIIQEDSIWKYREASHPILDQNSIDHSNEVLNLLKQLGKNDRLVVLLSGGASSLFEIPIEGYSLIDMISIQKRLLN SGKFIHEINLERKKSSKVKGGKLLSELNSELEVYTFVISDVIGDDPYTIGSGPTYPSENYFILGNLTKSIQTIIHKAKQL GYQTKCISDTWTGSVEETSYLIEKEFLSAIESNTKQMVLIGGELVCPVNGNGVGGRNQELALRITILLEKHQVNRNWMFL SAGTDGTDGPTDAAGGVVTNNTIALMKEKKWDPIVQLEDSNSYPILKDVNALVMTGPTGTNVNDILILLVEGSES
Sequences:
>Translated_395_residues MNSLKEEILYFFRLGVHAADPNSLFEDFWEDHSLLQETFHTSKKNLFVFSVGKAAYPMAMSFVHDFPIKNGYILTKYGHL PTEKQIIQEDSIWKYREASHPILDQNSIDHSNEVLNLLKQLGKNDRLVVLLSGGASSLFEIPIEGYSLIDMISIQKRLLN SGKFIHEINLERKKSSKVKGGKLLSELNSELEVYTFVISDVIGDDPYTIGSGPTYPSENYFILGNLTKSIQTIIHKAKQL GYQTKCISDTWTGSVEETSYLIEKEFLSAIESNTKQMVLIGGELVCPVNGNGVGGRNQELALRITILLEKHQVNRNWMFL SAGTDGTDGPTDAAGGVVTNNTIALMKEKKWDPIVQLEDSNSYPILKDVNALVMTGPTGTNVNDILILLVEGSES >Mature_395_residues MNSLKEEILYFFRLGVHAADPNSLFEDFWEDHSLLQETFHTSKKNLFVFSVGKAAYPMAMSFVHDFPIKNGYILTKYGHL PTEKQIIQEDSIWKYREASHPILDQNSIDHSNEVLNLLKQLGKNDRLVVLLSGGASSLFEIPIEGYSLIDMISIQKRLLN SGKFIHEINLERKKSSKVKGGKLLSELNSELEVYTFVISDVIGDDPYTIGSGPTYPSENYFILGNLTKSIQTIIHKAKQL GYQTKCISDTWTGSVEETSYLIEKEFLSAIESNTKQMVLIGGELVCPVNGNGVGGRNQELALRITILLEKHQVNRNWMFL SAGTDGTDGPTDAAGGVVTNNTIALMKEKKWDPIVQLEDSNSYPILKDVNALVMTGPTGTNVNDILILLVEGSES
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=445, Percent_Identity=26.2921348314607, Blast_Score=119, Evalue=6e-27, Organism=Caenorhabditis elegans, GI193205461, Length=351, Percent_Identity=29.6296296296296, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI19920578, Length=483, Percent_Identity=28.7784679089027, Blast_Score=146, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 43995; Mature: 43995
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLKEEILYFFRLGVHAADPNSLFEDFWEDHSLLQETFHTSKKNLFVFSVGKAAYPMAM CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH SFVHDFPIKNGYILTKYGHLPTEKQIIQEDSIWKYREASHPILDQNSIDHSNEVLNLLKQ HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHH LGKNDRLVVLLSGGASSLFEIPIEGYSLIDMISIQKRLLNSGKFIHEINLERKKSSKVKG HCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCH GKLLSELNSELEVYTFVISDVIGDDPYTIGSGPTYPSENYFILGNLTKSIQTIIHKAKQL HHHHHHHCCCCEEHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHC GYQTKCISDTWTGSVEETSYLIEKEFLSAIESNTKQMVLIGGELVCPVNGNGVGGRNQEL CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCEE ALRITILLEKHQVNRNWMFLSAGTDGTDGPTDAAGGVVTNNTIALMKEKKWDPIVQLEDS EEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECC NSYPILKDVNALVMTGPTGTNVNDILILLVEGSES CCCCCHHCCCEEEEECCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MNSLKEEILYFFRLGVHAADPNSLFEDFWEDHSLLQETFHTSKKNLFVFSVGKAAYPMAM CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH SFVHDFPIKNGYILTKYGHLPTEKQIIQEDSIWKYREASHPILDQNSIDHSNEVLNLLKQ HHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHH LGKNDRLVVLLSGGASSLFEIPIEGYSLIDMISIQKRLLNSGKFIHEINLERKKSSKVKG HCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCH GKLLSELNSELEVYTFVISDVIGDDPYTIGSGPTYPSENYFILGNLTKSIQTIIHKAKQL HHHHHHHCCCCEEHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHC GYQTKCISDTWTGSVEETSYLIEKEFLSAIESNTKQMVLIGGELVCPVNGNGVGGRNQEL CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCEE ALRITILLEKHQVNRNWMFLSAGTDGTDGPTDAAGGVVTNNTIALMKEKKWDPIVQLEDS EEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECC NSYPILKDVNALVMTGPTGTNVNDILILLVEGSES CCCCCHHCCCEEEEECCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]