Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is luxQ [H]
Identifier: 183221820
GI number: 183221820
Start: 2528788
End: 2530959
Strand: Reverse
Name: luxQ [H]
Synonym: LEPBI_I2451
Alternate gene names: 183221820
Gene position: 2530959-2528788 (Counterclockwise)
Preceding gene: 183221821
Following gene: 183221818
Centisome position: 70.31
GC content: 32.55
Gene sequence:
>2172_bases ATGACTTTTTTGATCCAAAAAAAACTAGAGCCATTTTATTTTGGTTTCCTTTGGGTTATTTTATTATCTTTAATATTTTC ATCTTTTTTCTTCTTCTTCCATCTTTTTGATAGCCGCAACAATTCAAGTCGTCTTGAGGAGAAGAAACAATGGGATTTAA GCTTAAAAGAATATGCGTCTTCCTTAAAAGATGCTGAGACAGGAGTGAGAGGATACTTACTTTCTAAAGACCGAACATTT TTAAATCCTTATCATAAAGCATTGATATTACTCCCTAATATCGAACAATATTTAATTGATCACTGTGAAAACGAAGATAA AGCAGATTTGATAAGTCTTATAAATTTAAGCCACTCCAAGCTAAAGCATATAGAAAGTCACTTGCTTTCTTTTTCCCAAA GAAATCCATCCAATCAAAGTTTAGTGATTGGGAATCAGAAAATGGCGGAATTTCGGTATCTATACGATAGTTTAACTTCG CGCAAACAAAAGAGAGATCAGTTTGAAATAGAAAAACATAACAAATCTAGTGATAGGCTCTTGGTTGTTTCAGCGGGTTT GTTTTTGCTCCTCTCGTTTTTGATTTTATGGATGATATTTATACTTAAAATAAGTATCAAATCTATCTCAGAAAAAGAGA TGATAGAAGATCGATATTTCGAAATTGAAGATTTATACCAAAATTCGCCCGTTGGTTTTCATAGTTTAGATCCAGATGGA TTTTTTTTAAGAGTGAATCGAACGGAATCTGAATGGTTTGGATATTCGGAAAAGGAATTGATTGGAAAAAAGAAATGGTC AGACCTTTTGACTGAAAATAGTCGAAATATTTTTTTTCAAAACTTTCCAATATTCAAAAAACAAGGTTATATAAATAATT TAATTTTTGAAGTGATCAAAAAGAATGGAGATTCAATTTTTGTCAATTTGTCATCAACAGCAATATTTGCACAAAATGGT CTAATGATTCGCAGTCGATCTGTGTTAGTTGATGTAACACAATCGATCGTATATGAAAGAGAACTTTTATTGGCCAAAAA AAAAGCGGAAGAAGCAAATAAAGCAAAGTCTGATTTTTTATCGAATATGAGTCATGAATTACGAACTCCACTCAATGCAG TTATTGGAATTTCGTTATGGTTACTGGAAGAAAATCCAAAAACAGAACAGTTGGAAAATTTAAAAAATTTAAAGTTTTCA AGTGAATCACTACTTTCTCTTATCAATGACATTTTAGATTTTAACAAAATTGAAGAAAGATTGGTTGAAATTGAAAGAAT TGATTTCAACTTAAAAGATTTTTTAAAATCGATCACGACATCTTTTACGATGCGAGCAAAAGAAAAATTATTAATTTTTA ATGAAGATATAAAAGATACGGTTCCAGAGTTCATACATTCAGATCCAACTCGTTTACTACAAATTTTGAATAATTTACTT TCCAATGCGTTAAAATTTACACAAGTGGGTTCGATCACTCTTTACGTAAGTGCAATTCCAATGGATTCGGAGTCAGTATT ATTAACATTTGAAGTAACCGATACCGGGATTGGAATCGAGCCAAATAAGTTCCAATCCGTTTTCGAAAAATTTACGCAAG CAAATCAAGATACCACGAGAAAATTTGGAGGTTCAGGTTTAGGCCTAGCCATTTCAAAGGCATTGGTTGAGCTTCTGGGA GGTCATTTAGTGCTTACCTCAGAAGTTGGCAAAGGATCAAAATTTTCATTTTCTCTTCCATGTAAAATTGGAAAGGCCAA TGAATTTATTTCGATCAGCACGGCCAAAAACAATGATGCTCTGAAAGATAAAATTGTTTTAGTTGCGGATGACATTCAAA TCAATCGATCAATAGTGATCCGTTTTTTGAATCGCTGGGGTATTCAAACTTTTGAAGCAACAAATGGATTGGAAGTATTA GAAATACTGAAAAATCAGCATGTTGATTTGATTCTAATGGATCTTCATATGCCTGAGATGGATGGGTATATGTCAGCAAC GGAAATTCGAAAGGTTTCCAATTGGAACCAAATTCCTATTCTTGCATTAACTGCTTCGGCGCAATTGGAAACTCGCGCGC AAATAAAGTCAGTTGGAATGAATGACTATATTTCCAAACCGTTCAACCCAAATGATTTATTGAATCAACTACACTTCTGG ATTGGTTCTTAA
Upstream 100 bases:
>100_bases ATTGAAAAAGGTACCCGGTTTGATCTATATTTCCCTGCATGGAAGGCAATGGTTTAATCTATTGACAGATTCATTCATTC GATTAAGAACATAGTTTCTT
Downstream 100 bases:
>100_bases AAATTACAATGATACTTCAAAACTGGAATCCAATGACAATGCGAGTATGGTGATATCATCGTCGGATCTTTTTGATTTCT GAAATTTTTCTATTTGTTCA
Product: putative two-component regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTFLIQKKLEPFYFGFLWVILLSLIFSSFFFFFHLFDSRNNSSRLEEKKQWDLSLKEYASSLKDAETGVRGYLLSKDRTF LNPYHKALILLPNIEQYLIDHCENEDKADLISLINLSHSKLKHIESHLLSFSQRNPSNQSLVIGNQKMAEFRYLYDSLTS RKQKRDQFEIEKHNKSSDRLLVVSAGLFLLLSFLILWMIFILKISIKSISEKEMIEDRYFEIEDLYQNSPVGFHSLDPDG FFLRVNRTESEWFGYSEKELIGKKKWSDLLTENSRNIFFQNFPIFKKQGYINNLIFEVIKKNGDSIFVNLSSTAIFAQNG LMIRSRSVLVDVTQSIVYERELLLAKKKAEEANKAKSDFLSNMSHELRTPLNAVIGISLWLLEENPKTEQLENLKNLKFS SESLLSLINDILDFNKIEERLVEIERIDFNLKDFLKSITTSFTMRAKEKLLIFNEDIKDTVPEFIHSDPTRLLQILNNLL SNALKFTQVGSITLYVSAIPMDSESVLLTFEVTDTGIGIEPNKFQSVFEKFTQANQDTTRKFGGSGLGLAISKALVELLG GHLVLTSEVGKGSKFSFSLPCKIGKANEFISISTAKNNDALKDKIVLVADDIQINRSIVIRFLNRWGIQTFEATNGLEVL EILKNQHVDLILMDLHMPEMDGYMSATEIRKVSNWNQIPILALTASAQLETRAQIKSVGMNDYISKPFNPNDLLNQLHFW IGS
Sequences:
>Translated_723_residues MTFLIQKKLEPFYFGFLWVILLSLIFSSFFFFFHLFDSRNNSSRLEEKKQWDLSLKEYASSLKDAETGVRGYLLSKDRTF LNPYHKALILLPNIEQYLIDHCENEDKADLISLINLSHSKLKHIESHLLSFSQRNPSNQSLVIGNQKMAEFRYLYDSLTS RKQKRDQFEIEKHNKSSDRLLVVSAGLFLLLSFLILWMIFILKISIKSISEKEMIEDRYFEIEDLYQNSPVGFHSLDPDG FFLRVNRTESEWFGYSEKELIGKKKWSDLLTENSRNIFFQNFPIFKKQGYINNLIFEVIKKNGDSIFVNLSSTAIFAQNG LMIRSRSVLVDVTQSIVYERELLLAKKKAEEANKAKSDFLSNMSHELRTPLNAVIGISLWLLEENPKTEQLENLKNLKFS SESLLSLINDILDFNKIEERLVEIERIDFNLKDFLKSITTSFTMRAKEKLLIFNEDIKDTVPEFIHSDPTRLLQILNNLL SNALKFTQVGSITLYVSAIPMDSESVLLTFEVTDTGIGIEPNKFQSVFEKFTQANQDTTRKFGGSGLGLAISKALVELLG GHLVLTSEVGKGSKFSFSLPCKIGKANEFISISTAKNNDALKDKIVLVADDIQINRSIVIRFLNRWGIQTFEATNGLEVL EILKNQHVDLILMDLHMPEMDGYMSATEIRKVSNWNQIPILALTASAQLETRAQIKSVGMNDYISKPFNPNDLLNQLHFW IGS >Mature_722_residues TFLIQKKLEPFYFGFLWVILLSLIFSSFFFFFHLFDSRNNSSRLEEKKQWDLSLKEYASSLKDAETGVRGYLLSKDRTFL NPYHKALILLPNIEQYLIDHCENEDKADLISLINLSHSKLKHIESHLLSFSQRNPSNQSLVIGNQKMAEFRYLYDSLTSR KQKRDQFEIEKHNKSSDRLLVVSAGLFLLLSFLILWMIFILKISIKSISEKEMIEDRYFEIEDLYQNSPVGFHSLDPDGF FLRVNRTESEWFGYSEKELIGKKKWSDLLTENSRNIFFQNFPIFKKQGYINNLIFEVIKKNGDSIFVNLSSTAIFAQNGL MIRSRSVLVDVTQSIVYERELLLAKKKAEEANKAKSDFLSNMSHELRTPLNAVIGISLWLLEENPKTEQLENLKNLKFSS ESLLSLINDILDFNKIEERLVEIERIDFNLKDFLKSITTSFTMRAKEKLLIFNEDIKDTVPEFIHSDPTRLLQILNNLLS NALKFTQVGSITLYVSAIPMDSESVLLTFEVTDTGIGIEPNKFQSVFEKFTQANQDTTRKFGGSGLGLAISKALVELLGG HLVLTSEVGKGSKFSFSLPCKIGKANEFISISTAKNNDALKDKIVLVADDIQINRSIVIRFLNRWGIQTFEATNGLEVLE ILKNQHVDLILMDLHMPEMDGYMSATEIRKVSNWNQIPILALTASAQLETRAQIKSVGMNDYISKPFNPNDLLNQLHFWI GS
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=526, Percent_Identity=30.2281368821293, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788713, Length=397, Percent_Identity=34.0050377833753, Blast_Score=188, Evalue=1e-48, Organism=Escherichia coli, GI87081816, Length=380, Percent_Identity=35.2631578947368, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1789149, Length=394, Percent_Identity=32.994923857868, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=38.671875, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=29.8701298701299, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1786600, Length=253, Percent_Identity=28.8537549407115, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI87082128, Length=230, Percent_Identity=29.5652173913043, Blast_Score=93, Evalue=7e-20, Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=28.8, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1786912, Length=340, Percent_Identity=25.8823529411765, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786783, Length=240, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788550, Length=111, Percent_Identity=34.2342342342342, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=28.5087719298246, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790300, Length=346, Percent_Identity=23.6994219653179, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790861, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788545, Length=331, Percent_Identity=24.1691842900302, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789809, Length=114, Percent_Identity=32.4561403508772, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790346, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790863, Length=108, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=34.2592592592593, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=74, Percent_Identity=47.2972972972973, Blast_Score=81, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 83055; Mature: 82923
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLIQKKLEPFYFGFLWVILLSLIFSSFFFFFHLFDSRNNSSRLEEKKQWDLSLKEYAS CCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH SLKDAETGVRGYLLSKDRTFLNPYHKALILLPNIEQYLIDHCENEDKADLISLINLSHSK HHHHHHCCCCEEEEECCCCHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHH LKHIESHLLSFSQRNPSNQSLVIGNQKMAEFRYLYDSLTSRKQKRDQFEIEKHNKSSDRL HHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEE LVVSAGLFLLLSFLILWMIFILKISIKSISEKEMIEDRYFEIEDLYQNSPVGFHSLDPDG EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC FFLRVNRTESEWFGYSEKELIGKKKWSDLLTENSRNIFFQNFPIFKKQGYINNLIFEVIK EEEEEECCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHH KNGDSIFVNLSSTAIFAQNGLMIRSRSVLVDVTQSIVYERELLLAKKKAEEANKAKSDFL CCCCEEEEEECCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMSHELRTPLNAVIGISLWLLEENPKTEQLENLKNLKFSSESLLSLINDILDFNKIEER HHHHHHHHCHHHHHHEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVEIERIDFNLKDFLKSITTSFTMRAKEKLLIFNEDIKDTVPEFIHSDPTRLLQILNNLL HHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH SNALKFTQVGSITLYVSAIPMDSESVLLTFEVTDTGIGIEPNKFQSVFEKFTQANQDTTR HHHHHHHEECCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHH KFGGSGLGLAISKALVELLGGHLVLTSEVGKGSKFSFSLPCKIGKANEFISISTAKNNDA HCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCEECCCCCEEEEEECCCCCC LKDKIVLVADDIQINRSIVIRFLNRWGIQTFEATNGLEVLEILKNQHVDLILMDLHMPEM CCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCC DGYMSATEIRKVSNWNQIPILALTASAQLETRAQIKSVGMNDYISKPFNPNDLLNQLHFW CCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH IGS CCC >Mature Secondary Structure TFLIQKKLEPFYFGFLWVILLSLIFSSFFFFFHLFDSRNNSSRLEEKKQWDLSLKEYAS CEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH SLKDAETGVRGYLLSKDRTFLNPYHKALILLPNIEQYLIDHCENEDKADLISLINLSHSK HHHHHHCCCCEEEEECCCCHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHH LKHIESHLLSFSQRNPSNQSLVIGNQKMAEFRYLYDSLTSRKQKRDQFEIEKHNKSSDRL HHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEE LVVSAGLFLLLSFLILWMIFILKISIKSISEKEMIEDRYFEIEDLYQNSPVGFHSLDPDG EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC FFLRVNRTESEWFGYSEKELIGKKKWSDLLTENSRNIFFQNFPIFKKQGYINNLIFEVIK EEEEEECCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHH KNGDSIFVNLSSTAIFAQNGLMIRSRSVLVDVTQSIVYERELLLAKKKAEEANKAKSDFL CCCCEEEEEECCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNMSHELRTPLNAVIGISLWLLEENPKTEQLENLKNLKFSSESLLSLINDILDFNKIEER HHHHHHHHCHHHHHHEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVEIERIDFNLKDFLKSITTSFTMRAKEKLLIFNEDIKDTVPEFIHSDPTRLLQILNNLL HHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH SNALKFTQVGSITLYVSAIPMDSESVLLTFEVTDTGIGIEPNKFQSVFEKFTQANQDTTR HHHHHHHEECCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHH KFGGSGLGLAISKALVELLGGHLVLTSEVGKGSKFSFSLPCKIGKANEFISISTAKNNDA HCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCEECCCCCEEEEEECCCCCC LKDKIVLVADDIQINRSIVIRFLNRWGIQTFEATNGLEVLEILKNQHVDLILMDLHMPEM CCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCC DGYMSATEIRKVSNWNQIPILALTASAQLETRAQIKSVGMNDYISKPFNPNDLLNQLHFW CCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH IGS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA