Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183221601

Identifier: 183221601

GI number: 183221601

Start: 2305370

End: 2306782

Strand: Direct

Name: 183221601

Synonym: LEPBI_I2223

Alternate gene names: NA

Gene position: 2305370-2306782 (Clockwise)

Preceding gene: 183221600

Following gene: 183221602

Centisome position: 64.04

GC content: 32.7

Gene sequence:

>1413_bases
ATGAAAGTTAAAGAAATTTCATTTCAAGAATTTAGGGATTTATCTCTCAGAGATGAATCTCATTTTTATGAAAAAAAGTC
CAAACTGATTGCACCAAAAAAATTACAAAAATATGCAGTTTCCTTTGGAAACGCTGACGGTGGTGAATTAATAGTAGGAA
TAAAAGATAATTCTGACGAACCGAATCCGGAAAAAAGATGGGATGGATTTTCTTCAATAGAAGATTTGAATGGATTATTA
CAGACATTGTTTAATATTTCTCCAAGTTTAGATCTTAAATATACAATTTTAACATGTCCTTCATTTAAAGGCTATGTTAT
TCAAATCAATATTGAACGAACAGCTGAGCTACATAAAACATTAGATGGCGAAGTATACCTAAGATCAGGAGCCCAATCAA
TACATATAAAGGACCCTCAGAAAATTGTAGAACTCTCTTATTCAAAAGGAACAACAACATTTGAGGATCAAACACTACCT
GAAATACCCCCTGAACAAATCACCGATGCGGAAGAAATTAAACTGTTTTTAAAATCTTTCTCTCCTAAAACGGATGCACT
TGATTTCTGTGTAAATCAAAATTTATTTACATATAAAGAATGGTTTCCGAGAGTAGCTGCCGTATTACTGTTCCTACCTT
CACCAGCTTCATTGTTACCCAAAAAATGTAGTGTAAAAATTACTCGATATAATACCAATGAAGAGAAACCAGAAAGAGAA
CATTTATTAAACCAAGAAACGATTGATGCACCTTTATACAATTGCATCAAAGTCACTGCAAAGAGGATAACTGAAATAAT
TTCATCAGTTACCGTAATGATTAAAAACTCTTTGGTAAAAATGGATTATCCTCAGGAAGCAATTTGGGAAATCATTGTCA
ACTCCTTAGTACATAGAGATTACTCAATTTCTGATGACGTACATGTTTTAATCTATAATAACAGAATAGAAATTCTTAGT
CCAGGTAAATTACCAGGTTACGTCACAACCTCGAATATTCTTGATGCTCGCTATGCAAGAAATCCAAAAATCGTAAGGAC
ATTACATAGATATCCTGATCCTCCAAATAAGGATATGGGAGAGGGATTGAATACAGCATTTCAAAAAATGAAAGAAAGGG
GTCTACAGCCTCCGATAATAACTGAAGTGGGAAATTACGTGAAAGTAACTTTACCCCATTTACCGATGGCAACTCCTGCT
GAATCAATACTCAAATATTTAAATAATAATCCTGAAATCACTAACAAGGAAGTTAGAGAATTAACAGGGATTAAATCTGA
AAATTTGGTAAAAGCAGAATTTTATAAATTGCGTAAAGCAGGGTTCCTTGAAAGAGTACCTGAAAAAAATTCAAATAAAT
CTGCTTGGAAATTAACCGAAGCAGGTAGAATTGAAAGTCAAAAATATTCCTAA

Upstream 100 bases:

>100_bases
TCGTGCCAATCCCTAACGTCCCCTACAGGGACTCAGGGCCAGCCTACGTCGGTTAGTCTAGTTCGTTATGCGCAATAGAA
TAAATTTAAAGGAAACATAA

Downstream 100 bases:

>100_bases
TTCTACTGCGCATAACAACGCCTTAACGCTTCGCTTCGGCACAAGGCCTCGCTCGGTCTGCGACACATAGGCTTCTGGCA
CTCCCCTTGCTTAAGCAAGT

Product: putative ATP-binding protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase RecG; Xin-Antitoxin System Toxin Component Fic Family; AAA-4 Family Protein; Transcriptional Regulator With HTH Domain; Truncated ATP-Dependent DNA Helicase; Transcription Regulator

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL
QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP
EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE
HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS
PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA
ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS

Sequences:

>Translated_470_residues
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL
QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP
EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE
HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS
PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA
ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS
>Mature_470_residues
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL
QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP
EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE
HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS
PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA
ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53660; Mature: 53660

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDE
CCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKT
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHC
LDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLPEIPPEQITDAEEIKLFLKSF
CCCCEEEECCCCEEEECCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHC
SPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCHHH
HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCC
YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMG
CCCCCCEEEEEECCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
EGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPAESILKYLNNNPEITNKEVRE
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHH
LTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDE
CCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKT
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHC
LDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLPEIPPEQITDAEEIKLFLKSF
CCCCEEEECCCCEEEECCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHC
SPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCHHH
HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCC
YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMG
CCCCCCEEEEEECCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
EGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPAESILKYLNNNPEITNKEVRE
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHH
LTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA