Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221512
Identifier: 183221512
GI number: 183221512
Start: 2222505
End: 2223512
Strand: Direct
Name: 183221512
Synonym: LEPBI_I2130
Alternate gene names: NA
Gene position: 2222505-2223512 (Clockwise)
Preceding gene: 183221511
Following gene: 183221513
Centisome position: 61.74
GC content: 39.98
Gene sequence:
>1008_bases ATGAATCAAATTCGACGAAACACTTCCCTCATTCTCTGTATCATGATCTCGTTCTCAGTTTTCAATACCAATTGTCGAGT GGATCCAAACCCCAAAGGAAGCCTTTTCGATCCGGGGACCACAGGAGGACTCATCAATTCTTTTGTCCTATACGATGCAT TGAGTGGCGGACCAAGTCGAACGTGGACTAGTTTTGTTTCCCCATTTGGGACAATGGATCCGACTGATTCTTTGGTGTTT GACCAACTGACAACAACGACCTATGCGATTTATATTAAAAATACAAACCTAACAACAAGGCTCTATTCAAGTTCGGATGG ACTCAATTACTCTCAAGTTGGCAACCAAATCAACAATACCAATACAAATATTTTTGGTGCATTTACGAGTCGGTTTCAAT TGTCGAATTATAATACAACAGATTCGGGAGTGAATTGGAATTCCAGCACGATACCTGGCTTTTGTTTGGTGAAATATAAT AATACAAGCGCCTATATTTTGGATGGAACTGCTGTAGAAAGAACCATTGATTCTGGGCTTAGCACAAACACGCTCACGAG TTCCCCTGCCTATCCTTCCAGAAATTCGGGAGTGTGTAGCTTTGGGAATGGAAAAGCCTATTTACTCGGAGGAAAAAATG GATCTTCCAATCTGTTTGATTTTTGGGAGTCAACAGATGGAATCAATTGGTCCCTCCTAACGGAAAGAGTTAAACCTACG TCAGGTGGTGGTTTCAATCTTCCATGTAACGTGATCCAGAATGCAAACGATACGAGCATTCTTGGTTTGGTTTACTCTGA TGTTACTACCTACAAATTTCACATCATCTTTTCCAACTTAGCCCTATTACAAAGTAATGATGGTCAAACTTGGCAATGTA CGAACCCAAATCTAAATTACAATTCTGAATTCAATTCCATTGCAAATCGAGCTGTTTTGATTGGCAATCGTCTCTTTGTC TATGGAATTTCCAGTAGCGGTCCACAAAATGTCTATACTGATTTATAA
Upstream 100 bases:
>100_bases ATATGGTGAATCATGACCAAAACTTTTATCTGGCAAGAGACCAAAGGAATGGAATGACAAGCCTAGAATACAAACTCGGA TATACTTGGGCTTTTTAATC
Downstream 100 bases:
>100_bases GGGAAGCCTTCCTTTTGATCAGTATCCAATCCAAATTTTTAATACAATCCATACTCAAATCGGATCAATCTAAAATTGAC ATATTTTTTCCTATGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNQIRRNTSLILCIMISFSVFNTNCRVDPNPKGSLFDPGTTGGLINSFVLYDALSGGPSRTWTSFVSPFGTMDPTDSLVF DQLTTTTYAIYIKNTNLTTRLYSSSDGLNYSQVGNQINNTNTNIFGAFTSRFQLSNYNTTDSGVNWNSSTIPGFCLVKYN NTSAYILDGTAVERTIDSGLSTNTLTSSPAYPSRNSGVCSFGNGKAYLLGGKNGSSNLFDFWESTDGINWSLLTERVKPT SGGGFNLPCNVIQNANDTSILGLVYSDVTTYKFHIIFSNLALLQSNDGQTWQCTNPNLNYNSEFNSIANRAVLIGNRLFV YGISSSGPQNVYTDL
Sequences:
>Translated_335_residues MNQIRRNTSLILCIMISFSVFNTNCRVDPNPKGSLFDPGTTGGLINSFVLYDALSGGPSRTWTSFVSPFGTMDPTDSLVF DQLTTTTYAIYIKNTNLTTRLYSSSDGLNYSQVGNQINNTNTNIFGAFTSRFQLSNYNTTDSGVNWNSSTIPGFCLVKYN NTSAYILDGTAVERTIDSGLSTNTLTSSPAYPSRNSGVCSFGNGKAYLLGGKNGSSNLFDFWESTDGINWSLLTERVKPT SGGGFNLPCNVIQNANDTSILGLVYSDVTTYKFHIIFSNLALLQSNDGQTWQCTNPNLNYNSEFNSIANRAVLIGNRLFV YGISSSGPQNVYTDL >Mature_335_residues MNQIRRNTSLILCIMISFSVFNTNCRVDPNPKGSLFDPGTTGGLINSFVLYDALSGGPSRTWTSFVSPFGTMDPTDSLVF DQLTTTTYAIYIKNTNLTTRLYSSSDGLNYSQVGNQINNTNTNIFGAFTSRFQLSNYNTTDSGVNWNSSTIPGFCLVKYN NTSAYILDGTAVERTIDSGLSTNTLTSSPAYPSRNSGVCSFGNGKAYLLGGKNGSSNLFDFWESTDGINWSLLTERVKPT SGGGFNLPCNVIQNANDTSILGLVYSDVTTYKFHIIFSNLALLQSNDGQTWQCTNPNLNYNSEFNSIANRAVLIGNRLFV YGISSSGPQNVYTDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36527; Mature: 36527
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIRRNTSLILCIMISFSVFNTNCRVDPNPKGSLFDPGTTGGLINSFVLYDALSGGPSR CCCCCCCCCEEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC TWTSFVSPFGTMDPTDSLVFDQLTTTTYAIYIKNTNLTTRLYSSSDGLNYSQVGNQINNT HHHHHHCCCCCCCCCCCHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCHHHHCCCCCCC NTNIFGAFTSRFQLSNYNTTDSGVNWNSSTIPGFCLVKYNNTSAYILDGTAVERTIDSGL CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECHHHHHHHHCCC STNTLTSSPAYPSRNSGVCSFGNGKAYLLGGKNGSSNLFDFWESTDGINWSLLTERVKPT CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCC SGGGFNLPCNVIQNANDTSILGLVYSDVTTYKFHIIFSNLALLQSNDGQTWQCTNPNLNY CCCCCCCCHHHHCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEECCCCCEEEECCCCCCC NSEFNSIANRAVLIGNRLFVYGISSSGPQNVYTDL CCCHHHHHCEEEEEECEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MNQIRRNTSLILCIMISFSVFNTNCRVDPNPKGSLFDPGTTGGLINSFVLYDALSGGPSR CCCCCCCCCEEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC TWTSFVSPFGTMDPTDSLVFDQLTTTTYAIYIKNTNLTTRLYSSSDGLNYSQVGNQINNT HHHHHHCCCCCCCCCCCHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCHHHHCCCCCCC NTNIFGAFTSRFQLSNYNTTDSGVNWNSSTIPGFCLVKYNNTSAYILDGTAVERTIDSGL CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECHHHHHHHHCCC STNTLTSSPAYPSRNSGVCSFGNGKAYLLGGKNGSSNLFDFWESTDGINWSLLTERVKPT CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHCCCCCCEEEEEEEECCCC SGGGFNLPCNVIQNANDTSILGLVYSDVTTYKFHIIFSNLALLQSNDGQTWQCTNPNLNY CCCCCCCCHHHHCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEECCCCCEEEECCCCCCC NSEFNSIANRAVLIGNRLFVYGISSSGPQNVYTDL CCCHHHHHCEEEEEECEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA