Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221499
Identifier: 183221499
GI number: 183221499
Start: 2210480
End: 2211706
Strand: Direct
Name: 183221499
Synonym: LEPBI_I2117
Alternate gene names: NA
Gene position: 2210480-2211706 (Clockwise)
Preceding gene: 183221492
Following gene: 183221503
Centisome position: 61.41
GC content: 44.99
Gene sequence:
>1227_bases ATGCTTCATAGACTTCGAATTGCTCCCTTTACTGGGATTCTAGTCCTTTCCATCTTGGCATGTGCTGGGTCCAATTCCGC GCAAAAAAACCCATCACTCCCAGACAATGTGGTCACAGCCATGGGAGAGGCCCCAATTTACCAAGGAGACTTGGCTCTTG CCCGAAATAAGGCCCTCAAAGATGCCAAACTCAATGCCATCCGGAAATTGGTGGGAGAACAGATCACAGAAAAATCGGGA GTTTCGGATGGGCAATCCCTTGGTTCCAAACTCTACGGAAAAACCGATAGTTTCGTGAAAAAATACGATATCATCAGTGA AGAACAATGGAAATTGGATACCCAAGACATGATCCGACTCAATGTCCGTTGCGAGGTGGAAGCCACAAAACTTTCGACTG CAGTTGATGCTCTCCTAGATGATGTAGGAAATCCCCGAATTGCAGTCCTTGTCCAAACCGTAGTCAATGGAAAGTCCTTC CCCATTGGATCTGCCACTAACATTGCAGAGGCGGAACTCATTGAAAAACTTCGTGCCAAAGGCAATAAGGTGGTGGATAG TTCCCAACTCACAGCCCTTCTCAAAAAAAATCCAAGCCTAGCCAAACTCGACCTCACCTCCGTTGAAGAAGGTAGCCCCC TTCTGACACTCGCACAAGATTCAGGGGCAGAAGTTTTGATCGTGGCAAAAGTGACGACAACCGACCAAAAGCCAGTGGTC CTCCCTGGTGGGAAAAAAACAGATTTTTTAAGTTCGGCGGCGACGGGTCCTTACCGTATCATCCAGTTATGGGGTGATGG AAAGATTTTTGGATCAGGGAGTTTGGAAGGCCGAGGTGCCGACATCACCCAAGAAGTTTCCAGAGAACAAGCCGTCAAAG ATTGGGCCAATTTGGTTTCAGTGAAAGTCGGAAAACAAATCAAAGACGAATGGTTCAAACTCACAGAACAAAATACGGTG ATTTTAAAATTCAAAGGTCTCGCCTTGGAAGATGCCATCAATTTCAAAAACGATTTGATGGAATACACTTCGGTGAAACA AGTGAATGACCGCAAAACAGAGATGAGTGGGTCGGAATGGGAACTCACTTACCCAGGAAAAGAATCCATGTTTGCGGAAG AATTGATGTACAAAAAAGATTCAAGTTTCCGTTTCTTAAGCAATAAAACGTTAAACATCAACAGTTCCAAACGCGGAGTT GTCGAAATTGAGTTTAAAAACAAGTAA
Upstream 100 bases:
>100_bases AGGCGAGGACAAGAAAGCAGAGAGAAAACCTAAAAAAGTAATTGGTCATGTAAGTATATGTTTCTATAATATAGCAAATC TTCAAGGAGAAATGTCCTTC
Downstream 100 bases:
>100_bases GTAAAACACTTATTGGATCTACTGGCCCGCAGAGAGAAAGGTTCGAATCTCTGTGGGGTCAAATGGTTTTGCAAAATAAC GAGCCACTTGTTTTGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MLHRLRIAPFTGILVLSILACAGSNSAQKNPSLPDNVVTAMGEAPIYQGDLALARNKALKDAKLNAIRKLVGEQITEKSG VSDGQSLGSKLYGKTDSFVKKYDIISEEQWKLDTQDMIRLNVRCEVEATKLSTAVDALLDDVGNPRIAVLVQTVVNGKSF PIGSATNIAEAELIEKLRAKGNKVVDSSQLTALLKKNPSLAKLDLTSVEEGSPLLTLAQDSGAEVLIVAKVTTTDQKPVV LPGGKKTDFLSSAATGPYRIIQLWGDGKIFGSGSLEGRGADITQEVSREQAVKDWANLVSVKVGKQIKDEWFKLTEQNTV ILKFKGLALEDAINFKNDLMEYTSVKQVNDRKTEMSGSEWELTYPGKESMFAEELMYKKDSSFRFLSNKTLNINSSKRGV VEIEFKNK
Sequences:
>Translated_408_residues MLHRLRIAPFTGILVLSILACAGSNSAQKNPSLPDNVVTAMGEAPIYQGDLALARNKALKDAKLNAIRKLVGEQITEKSG VSDGQSLGSKLYGKTDSFVKKYDIISEEQWKLDTQDMIRLNVRCEVEATKLSTAVDALLDDVGNPRIAVLVQTVVNGKSF PIGSATNIAEAELIEKLRAKGNKVVDSSQLTALLKKNPSLAKLDLTSVEEGSPLLTLAQDSGAEVLIVAKVTTTDQKPVV LPGGKKTDFLSSAATGPYRIIQLWGDGKIFGSGSLEGRGADITQEVSREQAVKDWANLVSVKVGKQIKDEWFKLTEQNTV ILKFKGLALEDAINFKNDLMEYTSVKQVNDRKTEMSGSEWELTYPGKESMFAEELMYKKDSSFRFLSNKTLNINSSKRGV VEIEFKNK >Mature_408_residues MLHRLRIAPFTGILVLSILACAGSNSAQKNPSLPDNVVTAMGEAPIYQGDLALARNKALKDAKLNAIRKLVGEQITEKSG VSDGQSLGSKLYGKTDSFVKKYDIISEEQWKLDTQDMIRLNVRCEVEATKLSTAVDALLDDVGNPRIAVLVQTVVNGKSF PIGSATNIAEAELIEKLRAKGNKVVDSSQLTALLKKNPSLAKLDLTSVEEGSPLLTLAQDSGAEVLIVAKVTTTDQKPVV LPGGKKTDFLSSAATGPYRIIQLWGDGKIFGSGSLEGRGADITQEVSREQAVKDWANLVSVKVGKQIKDEWFKLTEQNTV ILKFKGLALEDAINFKNDLMEYTSVKQVNDRKTEMSGSEWELTYPGKESMFAEELMYKKDSSFRFLSNKTLNINSSKRGV VEIEFKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44620; Mature: 44620
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRLRIAPFTGILVLSILACAGSNSAQKNPSLPDNVVTAMGEAPIYQGDLALARNKALK CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHH DAKLNAIRKLVGEQITEKSGVSDGQSLGSKLYGKTDSFVKKYDIISEEQWKLDTQDMIRL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEE NVRCEVEATKLSTAVDALLDDVGNPRIAVLVQTVVNGKSFPIGSATNIAEAELIEKLRAK EEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHC GNKVVDSSQLTALLKKNPSLAKLDLTSVEEGSPLLTLAQDSGAEVLIVAKVTTTDQKPVV CCEEECHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEE LPGGKKTDFLSSAATGPYRIIQLWGDGKIFGSGSLEGRGADITQEVSREQAVKDWANLVS ECCCCCCHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKVGKQIKDEWFKLTEQNTVILKFKGLALEDAINFKNDLMEYTSVKQVNDRKTEMSGSEW HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEE ELTYPGKESMFAEELMYKKDSSFRFLSNKTLNINSSKRGVVEIEFKNK EEECCCCHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEECCC >Mature Secondary Structure MLHRLRIAPFTGILVLSILACAGSNSAQKNPSLPDNVVTAMGEAPIYQGDLALARNKALK CCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEECCCHHHHHHHHHH DAKLNAIRKLVGEQITEKSGVSDGQSLGSKLYGKTDSFVKKYDIISEEQWKLDTQDMIRL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEE NVRCEVEATKLSTAVDALLDDVGNPRIAVLVQTVVNGKSFPIGSATNIAEAELIEKLRAK EEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHC GNKVVDSSQLTALLKKNPSLAKLDLTSVEEGSPLLTLAQDSGAEVLIVAKVTTTDQKPVV CCEEECHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEE LPGGKKTDFLSSAATGPYRIIQLWGDGKIFGSGSLEGRGADITQEVSREQAVKDWANLVS ECCCCCCHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH VKVGKQIKDEWFKLTEQNTVILKFKGLALEDAINFKNDLMEYTSVKQVNDRKTEMSGSEW HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEE ELTYPGKESMFAEELMYKKDSSFRFLSNKTLNINSSKRGVVEIEFKNK EEECCCCHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA