| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221466
Identifier: 183221466
GI number: 183221466
Start: 2178260
End: 2178772
Strand: Direct
Name: 183221466
Synonym: LEPBI_I2084
Alternate gene names: NA
Gene position: 2178260-2178772 (Clockwise)
Preceding gene: 183221465
Following gene: 183221467
Centisome position: 60.51
GC content: 35.09
Gene sequence:
>513_bases TTGTCTTATGAACAATTGTCATCCTTACCTGCCAATACAACAATTACTTTCATTGGGACCTATCCCAATCGAACAGGCAT TCGGATCCGAAAATTCAAAGTGGACCCAGACCCACAAAATAAAAATCGAATCAAACATTCGGAAGAAAAATCCATTTTAC TGGAATTCAATGGTTCCGTCTTATCCAAGGTAGAGATCCAAATCACAACGGAAGACACAGAAATTGAACAAAAAACAAAA ACCAAAATTACAGATTCCACTCCTCTAGATGATTCCGTAAACGATATGGTGATCCAATTTTCTGGCATTGATGGGAGTGA TAGTTTTCCACTTTCTACTTTACGAAATGATTCGATCAAACAAGAACGAAATGATTTTAAAAAAGACTTCTATATCAAAT TTTTATTAGATTTTTATAGCCAACTTGCTTCCATTAATGCCCTACAAAAATCAAGTGGCAATCCCAACCAAAAGAAGATG TTCAAACAACTCAACCAATCCTTAGGTTACTAA
Upstream 100 bases:
>100_bases TGTCAGTCTTTTCGCTGAGACTGACATTATCGAAAAAGAAAATCGGTTAGACAAAGAAATTCTAAACCTTTACCGAGACA TCGCAAAGGCTAGGGATCTT
Downstream 100 bases:
>100_bases TTTGTCAGAATTTATAAATCATGGAGACTCACATTCGATCGAAAACATCGAAAAGGTCGCAGAAAAAGCGAGAGAACTGG AGGCCATTTATGATGTGGTG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSYEQLSSLPANTTITFIGTYPNRTGIRIRKFKVDPDPQNKNRIKHSEEKSILLEFNGSVLSKVEIQITTEDTEIEQKTK TKITDSTPLDDSVNDMVIQFSGIDGSDSFPLSTLRNDSIKQERNDFKKDFYIKFLLDFYSQLASINALQKSSGNPNQKKM FKQLNQSLGY
Sequences:
>Translated_170_residues MSYEQLSSLPANTTITFIGTYPNRTGIRIRKFKVDPDPQNKNRIKHSEEKSILLEFNGSVLSKVEIQITTEDTEIEQKTK TKITDSTPLDDSVNDMVIQFSGIDGSDSFPLSTLRNDSIKQERNDFKKDFYIKFLLDFYSQLASINALQKSSGNPNQKKM FKQLNQSLGY >Mature_169_residues SYEQLSSLPANTTITFIGTYPNRTGIRIRKFKVDPDPQNKNRIKHSEEKSILLEFNGSVLSKVEIQITTEDTEIEQKTKT KITDSTPLDDSVNDMVIQFSGIDGSDSFPLSTLRNDSIKQERNDFKKDFYIKFLLDFYSQLASINALQKSSGNPNQKKMF KQLNQSLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19428; Mature: 19297
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYEQLSSLPANTTITFIGTYPNRTGIRIRKFKVDPDPQNKNRIKHSEEKSILLEFNGSV CCHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCE LSKVEIQITTEDTEIEQKTKTKITDSTPLDDSVNDMVIQFSGIDGSDSFPLSTLRNDSIK EEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCHHH QERNDFKKDFYIKFLLDFYSQLASINALQKSSGNPNQKKMFKQLNQSLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SYEQLSSLPANTTITFIGTYPNRTGIRIRKFKVDPDPQNKNRIKHSEEKSILLEFNGSV CHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCE LSKVEIQITTEDTEIEQKTKTKITDSTPLDDSVNDMVIQFSGIDGSDSFPLSTLRNDSIK EEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCHHH QERNDFKKDFYIKFLLDFYSQLASINALQKSSGNPNQKKMFKQLNQSLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA