| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221443
Identifier: 183221443
GI number: 183221443
Start: 2150020
End: 2150886
Strand: Direct
Name: 183221443
Synonym: LEPBI_I2061
Alternate gene names: NA
Gene position: 2150020-2150886 (Clockwise)
Preceding gene: 183221442
Following gene: 183221444
Centisome position: 59.73
GC content: 44.18
Gene sequence:
>867_bases TTGGTTTCAAAAGGTAGATTGGCAATCATCGCTGGTGACGGAGAGCTCCCTCACATTGGAATGAAGGAGGCACTTCTTGC AGGCGAGGATCCACTCTTCCTTGGCCTCATCGAATCCGATTTTTCCCCCAGAGGACAGGAGTCTCGTACCATTCCAGTCC ACATCACACAAGTGGGGAAAATTTTAAAAACCATCCAAAAGGAAAAGATCTCGCGGATCCTCATGCTTGGGAAAGTGAGA AAGGACCTTCTCTTCCAAAAACTCAAATTTGACCTCAAAGCCCTCTCTATCTTAGCAAGAACCATCAACCGCAATGACTA CCCCATTTTCCTTGCCATCGCCGAGGAATTTGAAGCGATGGGGGTGAAAGTGATCTCACAAAAGATCTATCTCAAATCAC TACTCCTTCCAGAAGGTCGTTACACTCCTAAAAAATTCTCAACGCAAGAGTTGAAAGACATCATGTTTGGGATGGAATAC GCTGAAAAAATGGCCGATTTAGACATTGGCCAAATGGTGGTCGTGAGCGACGAATCCGTGATTGCTGTGGAAGCTGTGGA AGGCACCGATGAAACCATTCGCCGTGGTGGCCTTTACACCAAAAAAAAGGGAGATGCGGTCGTCTGCAAAAGCCCCAAAA CAAAACAAGACGAACGATTTGATTTACCCACAATTGGAATTCATACCTTTCAGGTGATGTTAGAAAGTGGATGTAAAACA TTATGCATCCGTGAAGGAGAAACCCTTGTGGTCAATCCCAAGGAAGTGATCGAATTTGCCACAAAACACAAATTAAACTT TTGTGTCCTCGGTAAAAATGGAAATAAGGTTCTCAATGGTAGCCAAAAAAAAATCACACCGATCTAA
Upstream 100 bases:
>100_bases TTCAAAGGATCTGGTTTTTACGTAACCGATTACAAAAAAGAAAGTGCCCCCGCTACGCCTTCTAAAAGCGAACCAAGCAG CACGTAAAAAAGGAATTTTT
Downstream 100 bases:
>100_bases TACAAAAAAAAATATCCTAGTCATAGCAGGCGAACATTCCGGAGACCTCATCGGTGCGGATCTTTTGTTAGAACTCAAAA TGATCGAACCCGAATTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MVSKGRLAIIAGDGELPHIGMKEALLAGEDPLFLGLIESDFSPRGQESRTIPVHITQVGKILKTIQKEKISRILMLGKVR KDLLFQKLKFDLKALSILARTINRNDYPIFLAIAEEFEAMGVKVISQKIYLKSLLLPEGRYTPKKFSTQELKDIMFGMEY AEKMADLDIGQMVVVSDESVIAVEAVEGTDETIRRGGLYTKKKGDAVVCKSPKTKQDERFDLPTIGIHTFQVMLESGCKT LCIREGETLVVNPKEVIEFATKHKLNFCVLGKNGNKVLNGSQKKITPI
Sequences:
>Translated_288_residues MVSKGRLAIIAGDGELPHIGMKEALLAGEDPLFLGLIESDFSPRGQESRTIPVHITQVGKILKTIQKEKISRILMLGKVR KDLLFQKLKFDLKALSILARTINRNDYPIFLAIAEEFEAMGVKVISQKIYLKSLLLPEGRYTPKKFSTQELKDIMFGMEY AEKMADLDIGQMVVVSDESVIAVEAVEGTDETIRRGGLYTKKKGDAVVCKSPKTKQDERFDLPTIGIHTFQVMLESGCKT LCIREGETLVVNPKEVIEFATKHKLNFCVLGKNGNKVLNGSQKKITPI >Mature_288_residues MVSKGRLAIIAGDGELPHIGMKEALLAGEDPLFLGLIESDFSPRGQESRTIPVHITQVGKILKTIQKEKISRILMLGKVR KDLLFQKLKFDLKALSILARTINRNDYPIFLAIAEEFEAMGVKVISQKIYLKSLLLPEGRYTPKKFSTQELKDIMFGMEY AEKMADLDIGQMVVVSDESVIAVEAVEGTDETIRRGGLYTKKKGDAVVCKSPKTKQDERFDLPTIGIHTFQVMLESGCKT LCIREGETLVVNPKEVIEFATKHKLNFCVLGKNGNKVLNGSQKKITPI
Specific function: Unknown
COG id: COG3494
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32095; Mature: 32095
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKGRLAIIAGDGELPHIGMKEALLAGEDPLFLGLIESDFSPRGQESRTIPVHITQVGK CCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHH ILKTIQKEKISRILMLGKVRKDLLFQKLKFDLKALSILARTINRNDYPIFLAIAEEFEAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHH GVKVISQKIYLKSLLLPEGRYTPKKFSTQELKDIMFGMEYAEKMADLDIGQMVVVSDESV HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE IAVEAVEGTDETIRRGGLYTKKKGDAVVCKSPKTKQDERFDLPTIGIHTFQVMLESGCKT EEEEEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE LCIREGETLVVNPKEVIEFATKHKLNFCVLGKNGNKVLNGSQKKITPI EEEECCCEEEECHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure MVSKGRLAIIAGDGELPHIGMKEALLAGEDPLFLGLIESDFSPRGQESRTIPVHITQVGK CCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHH ILKTIQKEKISRILMLGKVRKDLLFQKLKFDLKALSILARTINRNDYPIFLAIAEEFEAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHH GVKVISQKIYLKSLLLPEGRYTPKKFSTQELKDIMFGMEYAEKMADLDIGQMVVVSDESV HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE IAVEAVEGTDETIRRGGLYTKKKGDAVVCKSPKTKQDERFDLPTIGIHTFQVMLESGCKT EEEEEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE LCIREGETLVVNPKEVIEFATKHKLNFCVLGKNGNKVLNGSQKKITPI EEEECCCEEEECHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA