| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221368
Identifier: 183221368
GI number: 183221368
Start: 2065753
End: 2067345
Strand: Direct
Name: 183221368
Synonym: LEPBI_I1986
Alternate gene names: NA
Gene position: 2065753-2067345 (Clockwise)
Preceding gene: 183221366
Following gene: 183221369
Centisome position: 57.39
GC content: 32.39
Gene sequence:
>1593_bases ATGGTGATCATGCGAAAACTTTCAACTTATCAATCTTGGATCAAATGGATCTTTTTTTTAAGTTTCGTTTTTTTATCCAT TCAGTATACATCTCCACAATATTCCTACTTTCAAGATAGCCACGATAAACTAATTCAAACCTATTCCATTTGGAAAAATC ATTTCCTATCCGACGCTCTGTATTATCCCGCGAAAGTTTTTGATTCAAATTATGAATACATCCACCTCACCAAAAACTTA TTTCTAAAAATTGACGAAAGACTCGTGAGTGCGTTTCCGATTCAGTTTGCCTATTTGATGGCACCTTTTTTATTCGTCTT TCCGCTTTCTAGTTTGGTTTATACATCTCTTTTATTCTTAATATTATCTTTTTTCCTATTAAGAAGGTATTACCAGTTTT CATTTTTGTTATTGTGGATTAGTTTCTTCGGTACTTTCCTTTGGCCACTTAGTTGGGAATATTCCGAACTACCTGCAATA TTTGCTTTTTCAGTATTTTGCCTTTTACCAATTCTAAAACGAAAAAAAGAAACTATCTTCCAATTGTTAGGTGGAATTGG ACTCTCTTGGATCGTGATGGTTCGCCTAGATACCCTTCCATTCTTTCTCCTATTTTTTTTGAGTTACTTTTATTTCATTT GGAAAGATAAAAACCGAAATGGATTCTTTAAGGAAATTTTATCCTTAAAAATTCTCATATTTTCCGGCATCATCGGGATC TTATTTCAATTTTTAATTAATACTATTCTTGTTCACCATTTTCTTGGATCGAGATACTTGGCAAACATGAATGGATTTTC GGTGGAAATGTCCACTAGACTTCAATGGTTTCAAAGCCTACTCTTTTATGGTGAGAAAAAAATTGGATTCTTTGTATATT TACCAATCACTGTATTTCTTCTAATTTTTTATGGGATCAAATTTAACAAAATCAATAGAACAAAAAAATCTTTGTTTCTA TCAATGACTATGACAATATTTCTAATTCCATTCCTTGCCCCAAACGACGGATTTAACAATTGGGGACCGCGTTATTTCAC AGTATTATTGATACCGTATCTACTCTTATTAAAACCAATTTTGTCGATCGTTTTCAAAAAAAGAAAATGGATATATTCAA TTTTCTTCTCTCTCTTATTCCTATATTCGGGTACGTTAGGATTGATCGGTGCAAAAATTCAAAAATCGAAAACAAATTTA ATCAAAAAATTCCAATCCGTCACAAATACGATCAAACCAGATATTATCGTATTCACCGACTATCTAAATTTATATTCAAT GGGAAGCGATTACATCAAACTTATGGCAATTGTTTCCTACACAACAGAATCCAATACAAAGCTCATCCATAGTATTAGTG AAATGATGCCAAATAAAAAAATAGCCTTCGTTGACTGGCACCCTTCTATTTTAACTCAAGAAATCAGAAGAACAATGAAT GCAGAAAAATTAAAAGGTGGATTTCCCATTTCAGATTGGAACTCTGATCTGCTAGAAAACACACTTAAAAATTTTACCTT CGATTACCAGAGAATCGACATTCAAACTTACCGTATTTGGTTGGGAACTATTGCTGAGAAGGAATCGAAGTGA
Upstream 100 bases:
>100_bases GTTTTGGAAATACTGTTTTTGAGATTCTATATAAAGCAATCTATTTTTACTTGATTCAAAGGATTAAGAATCTGGATCAG AAAGGAAAGGCTAAATCTAA
Downstream 100 bases:
>100_bases ATCACATGAATAGAAAAGATTTCAATTTATTGTTTATCTTCTTTGTATCAATTTTATGTCTACAATTGTTTCTTTCGGCT AAAAACAGTTTTATATCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MVIMRKLSTYQSWIKWIFFLSFVFLSIQYTSPQYSYFQDSHDKLIQTYSIWKNHFLSDALYYPAKVFDSNYEYIHLTKNL FLKIDERLVSAFPIQFAYLMAPFLFVFPLSSLVYTSLLFLILSFFLLRRYYQFSFLLLWISFFGTFLWPLSWEYSELPAI FAFSVFCLLPILKRKKETIFQLLGGIGLSWIVMVRLDTLPFFLLFFLSYFYFIWKDKNRNGFFKEILSLKILIFSGIIGI LFQFLINTILVHHFLGSRYLANMNGFSVEMSTRLQWFQSLLFYGEKKIGFFVYLPITVFLLIFYGIKFNKINRTKKSLFL SMTMTIFLIPFLAPNDGFNNWGPRYFTVLLIPYLLLLKPILSIVFKKRKWIYSIFFSLLFLYSGTLGLIGAKIQKSKTNL IKKFQSVTNTIKPDIIVFTDYLNLYSMGSDYIKLMAIVSYTTESNTKLIHSISEMMPNKKIAFVDWHPSILTQEIRRTMN AEKLKGGFPISDWNSDLLENTLKNFTFDYQRIDIQTYRIWLGTIAEKESK
Sequences:
>Translated_530_residues MVIMRKLSTYQSWIKWIFFLSFVFLSIQYTSPQYSYFQDSHDKLIQTYSIWKNHFLSDALYYPAKVFDSNYEYIHLTKNL FLKIDERLVSAFPIQFAYLMAPFLFVFPLSSLVYTSLLFLILSFFLLRRYYQFSFLLLWISFFGTFLWPLSWEYSELPAI FAFSVFCLLPILKRKKETIFQLLGGIGLSWIVMVRLDTLPFFLLFFLSYFYFIWKDKNRNGFFKEILSLKILIFSGIIGI LFQFLINTILVHHFLGSRYLANMNGFSVEMSTRLQWFQSLLFYGEKKIGFFVYLPITVFLLIFYGIKFNKINRTKKSLFL SMTMTIFLIPFLAPNDGFNNWGPRYFTVLLIPYLLLLKPILSIVFKKRKWIYSIFFSLLFLYSGTLGLIGAKIQKSKTNL IKKFQSVTNTIKPDIIVFTDYLNLYSMGSDYIKLMAIVSYTTESNTKLIHSISEMMPNKKIAFVDWHPSILTQEIRRTMN AEKLKGGFPISDWNSDLLENTLKNFTFDYQRIDIQTYRIWLGTIAEKESK >Mature_530_residues MVIMRKLSTYQSWIKWIFFLSFVFLSIQYTSPQYSYFQDSHDKLIQTYSIWKNHFLSDALYYPAKVFDSNYEYIHLTKNL FLKIDERLVSAFPIQFAYLMAPFLFVFPLSSLVYTSLLFLILSFFLLRRYYQFSFLLLWISFFGTFLWPLSWEYSELPAI FAFSVFCLLPILKRKKETIFQLLGGIGLSWIVMVRLDTLPFFLLFFLSYFYFIWKDKNRNGFFKEILSLKILIFSGIIGI LFQFLINTILVHHFLGSRYLANMNGFSVEMSTRLQWFQSLLFYGEKKIGFFVYLPITVFLLIFYGIKFNKINRTKKSLFL SMTMTIFLIPFLAPNDGFNNWGPRYFTVLLIPYLLLLKPILSIVFKKRKWIYSIFFSLLFLYSGTLGLIGAKIQKSKTNL IKKFQSVTNTIKPDIIVFTDYLNLYSMGSDYIKLMAIVSYTTESNTKLIHSISEMMPNKKIAFVDWHPSILTQEIRRTMN AEKLKGGFPISDWNSDLLENTLKNFTFDYQRIDIQTYRIWLGTIAEKESK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62866; Mature: 62866
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIMRKLSTYQSWIKWIFFLSFVFLSIQYTSPQYSYFQDSHDKLIQTYSIWKNHFLSDAL CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHH YYPAKVFDSNYEYIHLTKNLFLKIDERLVSAFPIQFAYLMAPFLFVFPLSSLVYTSLLFL HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSFFLLRRYYQFSFLLLWISFFGTFLWPLSWEYSELPAIFAFSVFCLLPILKRKKETIF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLGGIGLSWIVMVRLDTLPFFLLFFLSYFYFIWKDKNRNGFFKEILSLKILIFSGIIGI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH LFQFLINTILVHHFLGSRYLANMNGFSVEMSTRLQWFQSLLFYGEKKIGFFVYLPITVFL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LIFYGIKFNKINRTKKSLFLSMTMTIFLIPFLAPNDGFNNWGPRYFTVLLIPYLLLLKPI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSIVFKKRKWIYSIFFSLLFLYSGTLGLIGAKIQKSKTNLIKKFQSVTNTIKPDIIVFTD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH YLNLYSMGSDYIKLMAIVSYTTESNTKLIHSISEMMPNKKIAFVDWHPSILTQEIRRTMN HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC AEKLKGGFPISDWNSDLLENTLKNFTFDYQRIDIQTYRIWLGTIAEKESK HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIMRKLSTYQSWIKWIFFLSFVFLSIQYTSPQYSYFQDSHDKLIQTYSIWKNHFLSDAL CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHH YYPAKVFDSNYEYIHLTKNLFLKIDERLVSAFPIQFAYLMAPFLFVFPLSSLVYTSLLFL HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSFFLLRRYYQFSFLLLWISFFGTFLWPLSWEYSELPAIFAFSVFCLLPILKRKKETIF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLGGIGLSWIVMVRLDTLPFFLLFFLSYFYFIWKDKNRNGFFKEILSLKILIFSGIIGI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH LFQFLINTILVHHFLGSRYLANMNGFSVEMSTRLQWFQSLLFYGEKKIGFFVYLPITVFL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LIFYGIKFNKINRTKKSLFLSMTMTIFLIPFLAPNDGFNNWGPRYFTVLLIPYLLLLKPI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LSIVFKKRKWIYSIFFSLLFLYSGTLGLIGAKIQKSKTNLIKKFQSVTNTIKPDIIVFTD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH YLNLYSMGSDYIKLMAIVSYTTESNTKLIHSISEMMPNKKIAFVDWHPSILTQEIRRTMN HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC AEKLKGGFPISDWNSDLLENTLKNFTFDYQRIDIQTYRIWLGTIAEKESK HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA