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The map label for this gene is glgC [H]

Identifier: 183221305

GI number: 183221305

Start: 2011160

End: 2012443

Strand: Reverse

Name: glgC [H]

Synonym: LEPBI_I1922

Alternate gene names: 183221305

Gene position: 2012443-2011160 (Counterclockwise)

Preceding gene: 183221306

Following gene: 183221304

Centisome position: 55.91

GC content: 43.22

Gene sequence:

>1284_bases
ATGAGATTCCAAGAAGACTCAATCGACTGTGTGGATTTTATCTTAAAAAAAGATGAAGTGCTCACAATCATTTTAGGTGG
GGGAAAAGGCACAAGGTTATTGCCTCTAACGGAAAAACGTTCCAAACCCGCTGTGAGTTTTGGCGGGAAGTATCGGTTGA
TCGATATCCCCATCTCGAATTCACTCAATAGTGGATTTGAAAAAATTTTCATCCTTACACAGTTTAACTCGTATTCGCTG
AACCGACACATCAATCGGACCTATGCCACAAACAACATCCACCAAAAGAGTTTTGTTGAAATCATTGCGGCGGAACAAAC
AGTTTCCAGTGCCAATTGGTTTGAAGGGACTGCGGATGCCGTAAGGAAGGTTTTACCTTATATCCGAGAACAAAAACCAA
AGTATGTACTCATCCTTTCCGGTGACCAATTGTACAATATGGACCTTGCTGACTTTATGCAAAGCCATTTGATGGATCCA
GAAACCCAGATCTCTGTGGCCACAAATGCCATTCCCGAAGACCAAATTTATGGTTTAGGCATCGTCAAAGCAGGCGTAGG
TGGGAGTATCCAAGAGTTCATTGAAAAACCACAAGATCTTTCACAAGTAGAATCGTGTCGGACAGAAAACGGATCCTTCC
TTGCCAATATGGGGATTTATATCTTTAATACCTCTACATTAATTGATGTATTAGAAGACAGAAGTATGGCCGATTTCGGA
AAGGAAATCCTACCGAGGGCCATTAAAGAACGAAAGGTAAAAGCGTATACTTACGACGGTTATTGGGAGGACATTGGGAC
CATCAAAGCCTTTTATGAAGCCAATTTGATGTTAACCGACCATATTCCGAAATTCAATTTATACTTAGAGAAAACCCCTA
TATATACGAGGGCAAGGGCCCTGCCACCGTCAAAGATCAATCAGGCGGTGGTGAACCAAGCTTTAATTTCAGAAGGGACC
ATCCTTAACCAATGTGAGGTGCACCGTTCCATCATTGGAGTGAGGCAACTCATAGCTTCCGGGACCAAAATCTACGATTC
CATCATTATGGGCCTTGACCACTATGGTTACTTTGATCGGAAGTCAGGGAAAATCCCGATTGGGATTGGACCTAACTGCG
AAATACGACGGACAATTGTCGATAAAGATTGTGCCATCGGTGCCAACGTTCGGCTGTTAAACGAACAAAACTTACAAGAG
TACGAAGATGAATACGTTCGCATCCGAGATGGGATCATCGTCGTTCCTAGGCACTCCGCGATCCCAGACGGCTACATAAT
TTGA

Upstream 100 bases:

>100_bases
AAAAATGGACGGCAAACAAATCTTAGAAGCACTATTAAAAAATTAGAATCTTCTTTTTCCTTTTCTTGCTTTTTCGTCTA
ATCCCATTATAAGGATAGGT

Downstream 100 bases:

>100_bases
GTCAAAAATGACACAATTGTGGATTCTGTTGGTCAAAAATGAGTCCATTTTGTTCCAAAAATGTGGAATTTTTCTTGCCA
GTTTGGAACTGAGTTCTAGG

Product: glucose-1-phosphate adenylyltransferase small subunit

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRFQEDSIDCVDFILKKDEVLTIILGGGKGTRLLPLTEKRSKPAVSFGGKYRLIDIPISNSLNSGFEKIFILTQFNSYSL
NRHINRTYATNNIHQKSFVEIIAAEQTVSSANWFEGTADAVRKVLPYIREQKPKYVLILSGDQLYNMDLADFMQSHLMDP
ETQISVATNAIPEDQIYGLGIVKAGVGGSIQEFIEKPQDLSQVESCRTENGSFLANMGIYIFNTSTLIDVLEDRSMADFG
KEILPRAIKERKVKAYTYDGYWEDIGTIKAFYEANLMLTDHIPKFNLYLEKTPIYTRARALPPSKINQAVVNQALISEGT
ILNQCEVHRSIIGVRQLIASGTKIYDSIIMGLDHYGYFDRKSGKIPIGIGPNCEIRRTIVDKDCAIGANVRLLNEQNLQE
YEDEYVRIRDGIIVVPRHSAIPDGYII

Sequences:

>Translated_427_residues
MRFQEDSIDCVDFILKKDEVLTIILGGGKGTRLLPLTEKRSKPAVSFGGKYRLIDIPISNSLNSGFEKIFILTQFNSYSL
NRHINRTYATNNIHQKSFVEIIAAEQTVSSANWFEGTADAVRKVLPYIREQKPKYVLILSGDQLYNMDLADFMQSHLMDP
ETQISVATNAIPEDQIYGLGIVKAGVGGSIQEFIEKPQDLSQVESCRTENGSFLANMGIYIFNTSTLIDVLEDRSMADFG
KEILPRAIKERKVKAYTYDGYWEDIGTIKAFYEANLMLTDHIPKFNLYLEKTPIYTRARALPPSKINQAVVNQALISEGT
ILNQCEVHRSIIGVRQLIASGTKIYDSIIMGLDHYGYFDRKSGKIPIGIGPNCEIRRTIVDKDCAIGANVRLLNEQNLQE
YEDEYVRIRDGIIVVPRHSAIPDGYII
>Mature_427_residues
MRFQEDSIDCVDFILKKDEVLTIILGGGKGTRLLPLTEKRSKPAVSFGGKYRLIDIPISNSLNSGFEKIFILTQFNSYSL
NRHINRTYATNNIHQKSFVEIIAAEQTVSSANWFEGTADAVRKVLPYIREQKPKYVLILSGDQLYNMDLADFMQSHLMDP
ETQISVATNAIPEDQIYGLGIVKAGVGGSIQEFIEKPQDLSQVESCRTENGSFLANMGIYIFNTSTLIDVLEDRSMADFG
KEILPRAIKERKVKAYTYDGYWEDIGTIKAFYEANLMLTDHIPKFNLYLEKTPIYTRARALPPSKINQAVVNQALISEGT
ILNQCEVHRSIIGVRQLIASGTKIYDSIIMGLDHYGYFDRKSGKIPIGIGPNCEIRRTIVDKDCAIGANVRLLNEQNLQE
YEDEYVRIRDGIIVVPRHSAIPDGYII

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=419, Percent_Identity=31.2649164677804, Blast_Score=232, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6320148, Length=265, Percent_Identity=23.3962264150943, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21355443, Length=250, Percent_Identity=26.8, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24644084, Length=250, Percent_Identity=26.8, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 48139; Mature: 48139

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQEDSIDCVDFILKKDEVLTIILGGGKGTRLLPLTEKRSKPAVSFGGKYRLIDIPISN
CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCEECCCEEEEEEEECCC
SLNSGFEKIFILTQFNSYSLNRHINRTYATNNIHQKSFVEIIAAEQTVSSANWFEGTADA
CCCCCCEEEEEEEECCCEECCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
VRKVLPYIREQKPKYVLILSGDQLYNMDLADFMQSHLMDPETQISVATNAIPEDQIYGLG
HHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEE
IVKAGVGGSIQEFIEKPQDLSQVESCRTENGSFLANMGIYIFNTSTLIDVLEDRSMADFG
EEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEECCEEEEECHHHHHHHHCCCHHHHH
KEILPRAIKERKVKAYTYDGYWEDIGTIKAFYEANLMLTDHIPKFNLYLEKTPIYTRARA
HHHHHHHHHCCCEEEEEECCCHHHHHHEEHHHCCCEEEECCCCCEEEEEECCCCCHHHCC
LPPSKINQAVVNQALISEGTILNQCEVHRSIIGVRQLIASGTKIYDSIIMGLDHYGYFDR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
KSGKIPIGIGPNCEIRRTIVDKDCAIGANVRLLNEQNLQEYEDEYVRIRDGIIVVPRHSA
CCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHEEEEECCEEEEECCCC
IPDGYII
CCCCCCC
>Mature Secondary Structure
MRFQEDSIDCVDFILKKDEVLTIILGGGKGTRLLPLTEKRSKPAVSFGGKYRLIDIPISN
CCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCEECCCEEEEEEEECCC
SLNSGFEKIFILTQFNSYSLNRHINRTYATNNIHQKSFVEIIAAEQTVSSANWFEGTADA
CCCCCCEEEEEEEECCCEECCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
VRKVLPYIREQKPKYVLILSGDQLYNMDLADFMQSHLMDPETQISVATNAIPEDQIYGLG
HHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEE
IVKAGVGGSIQEFIEKPQDLSQVESCRTENGSFLANMGIYIFNTSTLIDVLEDRSMADFG
EEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEECCEEEEECHHHHHHHHCCCHHHHH
KEILPRAIKERKVKAYTYDGYWEDIGTIKAFYEANLMLTDHIPKFNLYLEKTPIYTRARA
HHHHHHHHHCCCEEEEEECCCHHHHHHEEHHHCCCEEEECCCCCEEEEEECCCCCHHHCC
LPPSKINQAVVNQALISEGTILNQCEVHRSIIGVRQLIASGTKIYDSIIMGLDHYGYFDR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
KSGKIPIGIGPNCEIRRTIVDKDCAIGANVRLLNEQNLQEYEDEYVRIRDGIIVVPRHSA
CCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHEEEEECCEEEEECCCC
IPDGYII
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA