| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is sspA [H]
Identifier: 183221291
GI number: 183221291
Start: 1999517
End: 2000188
Strand: Direct
Name: sspA [H]
Synonym: LEPBI_I1908
Alternate gene names: 183221291
Gene position: 1999517-2000188 (Clockwise)
Preceding gene: 183221290
Following gene: 183221292
Centisome position: 55.55
GC content: 38.24
Gene sequence:
>672_bases ATGACAAAACCAACTCTTGTGAGCTTTAAACTTTGCCCTTACGTGCAACGTTCCGTGATCAACCTTTTAGAAAAAAAAGT AGAGTATGAAATCAAATACATTGACCTAGCAAACAAACCAGATTGGTTTTTGAAAATTTCTCCTTTTGGAAGAGTACCAG TACTCGTGGTAGGTGAGGAAGTACTGTTTGAATCGGCTGTCATCAACGAGTATTTAGATGAAACGAATCTACCTTCTCTC CACCCTAAAGACCCATTACTAAAAGCGAAACATAGAGCCTGGGCAGAATTTGCCAGTGCTTTGTTAGTAGACCAATACGG TTGGACCATGTCGAAGGAAGAAAGTGACTCCAATAAAAAAAAGGAAGAGATCCTTTCTAAATTCAAAATCCTCGAATCCA TTTTACCAGAGCCAAAAAATGGCACCTTATTCTTTGCTGGTGAAACCAAACATCTCGTCGACACAGCCTATGCCCCGTTT TTTATGAGAATGGAGTTTTTAAAAAACAAGGGAGTAGAATTTGATTTGGTGAGTGGTTTTCCAAAAGTACAAACTTGGAG TGATACCTTACTTTCTTTGCCTTCTGTAAAGAATTCTGTTTTACCAGAAGTGCCAAAAGAATACATTGAATTTATCAAAG CCCACAACTCATGGATGGGAGGAAAATTATAG
Upstream 100 bases:
>100_bases AACAACACAGAAAAGTTTACTCAGTCCTTGGCCCTGAATTCAAAAAGGGATTACATGCCTTAGAAATGGACCTTTCCGCA CCAAAAGGAGTCTAAATGAT
Downstream 100 bases:
>100_bases GATGACCATTCCAGAAATCCAAAAAAAAATCGAAGAAGGATTACCAGGTTGTACTGTAGAAATTTTAGATCCCTACCGTG ATGGTGTCCATATCAAAGCA
Product: putative glutathione S-transferase protein
Products: HX; R-S-glutathione
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTKPTLVSFKLCPYVQRSVINLLEKKVEYEIKYIDLANKPDWFLKISPFGRVPVLVVGEEVLFESAVINEYLDETNLPSL HPKDPLLKAKHRAWAEFASALLVDQYGWTMSKEESDSNKKKEEILSKFKILESILPEPKNGTLFFAGETKHLVDTAYAPF FMRMEFLKNKGVEFDLVSGFPKVQTWSDTLLSLPSVKNSVLPEVPKEYIEFIKAHNSWMGGKL
Sequences:
>Translated_223_residues MTKPTLVSFKLCPYVQRSVINLLEKKVEYEIKYIDLANKPDWFLKISPFGRVPVLVVGEEVLFESAVINEYLDETNLPSL HPKDPLLKAKHRAWAEFASALLVDQYGWTMSKEESDSNKKKEEILSKFKILESILPEPKNGTLFFAGETKHLVDTAYAPF FMRMEFLKNKGVEFDLVSGFPKVQTWSDTLLSLPSVKNSVLPEVPKEYIEFIKAHNSWMGGKL >Mature_222_residues TKPTLVSFKLCPYVQRSVINLLEKKVEYEIKYIDLANKPDWFLKISPFGRVPVLVVGEEVLFESAVINEYLDETNLPSLH PKDPLLKAKHRAWAEFASALLVDQYGWTMSKEESDSNKKKEEILSKFKILESILPEPKNGTLFFAGETKHLVDTAYAPFF MRMEFLKNKGVEFDLVSGFPKVQTWSDTLLSLPSVKNSVLPEVPKEYIEFIKAHNSWMGGKL
Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4758484, Length=194, Percent_Identity=33.5051546391753, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI300360534, Length=190, Percent_Identity=33.6842105263158, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI38016131, Length=195, Percent_Identity=29.7435897435897, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI300360569, Length=191, Percent_Identity=29.8429319371728, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI300360532, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI300360567, Length=194, Percent_Identity=27.319587628866, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144449, Length=198, Percent_Identity=28.2828282828283, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193207701, Length=203, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115532656, Length=228, Percent_Identity=29.8245614035088, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115532652, Length=228, Percent_Identity=29.8245614035088, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355775, Length=198, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI21355763, Length=204, Percent_Identity=34.3137254901961, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355779, Length=229, Percent_Identity=33.1877729257642, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24660979, Length=207, Percent_Identity=29.951690821256, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355765, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 25561; Mature: 25430
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPTLVSFKLCPYVQRSVINLLEKKVEYEIKYIDLANKPDWFLKISPFGRVPVLVVGEE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEECHH VLFESAVINEYLDETNLPSLHPKDPLLKAKHRAWAEFASALLVDQYGWTMSKEESDSNKK HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH KEEILSKFKILESILPEPKNGTLFFAGETKHLVDTAYAPFFMRMEFLKNKGVEFDLVSGF HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PKVQTWSDTLLSLPSVKNSVLPEVPKEYIEFIKAHNSWMGGKL CCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKPTLVSFKLCPYVQRSVINLLEKKVEYEIKYIDLANKPDWFLKISPFGRVPVLVVGEE CCCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEECHH VLFESAVINEYLDETNLPSLHPKDPLLKAKHRAWAEFASALLVDQYGWTMSKEESDSNKK HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH KEEILSKFKILESILPEPKNGTLFFAGETKHLVDTAYAPFFMRMEFLKNKGVEFDLVSGF HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC PKVQTWSDTLLSLPSVKNSVLPEVPKEYIEFIKAHNSWMGGKL CCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]