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The map label for this gene is flaB4 [H]

Identifier: 183221256

GI number: 183221256

Start: 1963407

End: 1964261

Strand: Direct

Name: flaB4 [H]

Synonym: LEPBI_I1872

Alternate gene names: 183221256

Gene position: 1963407-1964261 (Clockwise)

Preceding gene: 183221253

Following gene: 183221257

Centisome position: 54.54

GC content: 42.22

Gene sequence:

>855_bases
GTGACAATGATTATCAATCACAACATCAGTGCTCTCGTTGCAAAACGAGCGCTCTCAAACACCAGTCGAGACATGGACAA
GTCCATGGAACACCTAGCTACGGGTATGCGAATCAACAGACCTGGGGATGATTCCCTGGGGTTTTCCGTATCCGAAAAAC
TTAGATCCCAAATCCGAGCACTTGGCCAAGCGGAGCGAAATACCCAGGATGGTATGTCGTTTTTACAAGTCACGGAAGGA
TCTTTGGACCAAGTAAACTCCATATTACAGAGGTTACGTGAACTTTCCGTACAATCAGCAAACGGAATCTATTCGGATGA
AGACAGAAAACTTGTCCAATTAGAAGTATCCCAACTGGTTGAAGAAGTGGAACGGATCGGAACATCTGCGGAGTTTAATA
AAGTTAAACCATTGGATGGTAGGTTTTCAAGGGCGAACAAAAATCCAATGACCTTACAAGTGGGTGCAAACGGAACAGAA
AAAATTGAAGTCTACATCAATACGATGACAAGTTCTTCATTGAAACTGAAACAAGCTGGAAACAAGTTGACACTTTCAAC
TCCAAACAAAGCTTCCGATTCACTCCAGGTTTTGGATGATGCCATATCGAAAGTCAATCGACTTAGATCAGACTTAGGCG
CCTATTATAACCGTTTGGATTTAACCTTAAAATCACTCAGTAACAACTATGTGAATATGGTTTCTTCTGAATCACAAATA
AGAGACGCGGATATGGCAACGGAAATGGTGGAATACTCGAAAAACCAAATCCTAACCAAATCAGGTGTGGCCATGCTGGC
ACAAGCAAATCTCAGACCAGAATCAGTAGTAAAACTCCTCACGGACAGATACTAA

Upstream 100 bases:

>100_bases
GGCAACCCCTTCTCTCCTCGAAGGAATGGATTTCTGGAAACGGATTTTTTCCTTTCTCCGCCTGTAGGGAAACAAGCGGG
TCATGGACACACAGGAGGGT

Downstream 100 bases:

>100_bases
GGTTTTTTAAGAGATGGAAATCCTCCTTGCAAACAAGGAGGATTTCTTTAAACTTTGTCCGAAACCTTCAAATCGAAGGG
AAAAGAGGACAATCACTTTG

Product: flagellar filament 35 kDa core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRALGQAERNTQDGMSFLQVTEG
SLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLVEEVERIGTSAEFNKVKPLDGRFSRANKNPMTLQVGANGTE
KIEVYINTMTSSSLKLKQAGNKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQI
RDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLLTDRY

Sequences:

>Translated_284_residues
MTMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRALGQAERNTQDGMSFLQVTEG
SLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLVEEVERIGTSAEFNKVKPLDGRFSRANKNPMTLQVGANGTE
KIEVYINTMTSSSLKLKQAGNKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQI
RDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLLTDRY
>Mature_283_residues
TMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRALGQAERNTQDGMSFLQVTEGS
LDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLVEEVERIGTSAEFNKVKPLDGRFSRANKNPMTLQVGANGTEK
IEVYINTMTSSSLKLKQAGNKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQIR
DADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLLTDRY

Specific function: Component of the core of the flagella (Probable) [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=176, Percent_Identity=34.0909090909091, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31528; Mature: 31397

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRA
CEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LGQAERNTQDGMSFLQVTEGSLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLV
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EEVERIGTSAEFNKVKPLDGRFSRANKNPMTLQVGANGTEKIEVYINTMTSSSLKLKQAG
HHHHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEHHHCC
NKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQI
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
RDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLLTDRY
HHHHHHHHHHHHHHHHEEHHHCHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TMIINHNISALVAKRALSNTSRDMDKSMEHLATGMRINRPGDDSLGFSVSEKLRSQIRA
EEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LGQAERNTQDGMSFLQVTEGSLDQVNSILQRLRELSVQSANGIYSDEDRKLVQLEVSQLV
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EEVERIGTSAEFNKVKPLDGRFSRANKNPMTLQVGANGTEKIEVYINTMTSSSLKLKQAG
HHHHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEHHHCC
NKLTLSTPNKASDSLQVLDDAISKVNRLRSDLGAYYNRLDLTLKSLSNNYVNMVSSESQI
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
RDADMATEMVEYSKNQILTKSGVAMLAQANLRPESVVKLLTDRY
HHHHHHHHHHHHHHHHEEHHHCHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA