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The map label for this gene is yvbX [H]

Identifier: 183221226

GI number: 183221226

Start: 1931636

End: 1933216

Strand: Reverse

Name: yvbX [H]

Synonym: LEPBI_I1840

Alternate gene names: 183221226

Gene position: 1933216-1931636 (Counterclockwise)

Preceding gene: 183221229

Following gene: 183221225

Centisome position: 53.71

GC content: 42.69

Gene sequence:

>1581_bases
ATGTCAGAATCACAATCCCCAAATGCCCCTAAACGCCCACTTTCGAATGTGGCGAAATATTCCTTACTATTTGCCTCCTG
GTTCTTTTTATCCGCGATATCGTTTTATTTGGGAATGAATCTCATGCAAAATTCTGGTTCGAGTTTGGTCCTAAAGGACC
TACCCAAAACAGGAAACACGAACCCAAGTGTTGTGGAAGCTTCCACACCGTCTCTCGGCACACCATCGGAAATGGAAACA
ACCAATCCGACAGATTCCAAACCAACTACCTCCGTGGAAGAAGAGGTGATGGAAACTCCTAATTTTCTCCCAGATGAAAA
TGTGAGTTTTCGTTCTTCTGCATGGTCTACGGACTGGACGGCGATGAAAAAAACGGTCCATCTTTATAACGAAATCCATC
CCTTCATTTATACGATGAAAGGAGGGCTTTCCAATACTGGGGAGCTTATCTCTACTTGGTCAACCAGCTCCAGAAAAGAA
CGAGTCCAGGAACTTCGTGCCTTAAATCCAAACGTAAAAATCATCCCTACCATCTTTCGTTGGGAAAATCCAAAAGAAAA
AATCCAAGAAAATATTGGAATGGGCGGACGAAATGATATCCGTGACCACCACATCCAAGTGATTGTGAACGAGATCATGA
CCTATGGATATGATGGAATTGACATCGACTATGAAGGGATGTCCTGCGACAAAAAAGAAAAGTTCGAAGAATTTTTTGCC
CTTCTTGCCAAGGAAGTTCATAAAAAAGGGAAATTGATTTCGGTTGCCGTCCACCCAAAGACGCCGGCAGAAAAATCCAA
AAAGAAAGAACTCCAATGCCGTGGACTTTCAAAACCCATCCAATTGGATTTTCGCGAAAATTGGAGAGGTCCTACCACTC
ATGACTATGCCTTCCTTGCCAAACATGCGGATCGTGTGAAGATCATGGCCTATGAACTCCACCCAAGGAAGTATCATAAC
CCAGGTCCAGGTCCACAAGCTCCCAATGTGTGGTTAAAAGACATCATCACCTATGCCAAAAAAAGGGTACCCACTCACAA
ACTTTATATGGCAATCCCTACTTATGGATATGACTGGGCACTCAATTGTAAGTCTTCTGCCAAGGCGATTTACCATTCGG
ATGCACAAAGGATCAAAGCAGGCACACATAAAAACCGCCAACCCACGGACATCAATCGTATCTTAAATGAAGAAAACAAA
GTAGCAAGTTGGAGAAACTTATCCAAGTTTTCTGACATCCACAAAAACCGTGCCTATGAAGACCCTTCCTTGTGGTATAC
AAGTGGCGGTTGTGATCGAGTGGCGTTTTATATGAACCGTCGTGCCTTCGAAGAGAAGATGACTCTTTTACGTAAGTATG
ACCTCGGTGGATTTTCTTTTTGGCAACTCGTCACTGACAATGACCCTGAGATCAATGTTTATTTGAGTAAACTCGTACAA
GGACAATTGCCACCAGTCGAAAAAGCGAAGGAAGAAGAAGAACCAAAAGAAGAAACAACAATCCAAAATACCGAATCCAA
AGAAACGGTAAAGGTTTCCGAATCCAAACCAAAATCCAAATCAAAAACCAAACAGTTTTAA

Upstream 100 bases:

>100_bases
TTCCTAAAAAATCATGGGTTACAGATAGATAGAGCGAGTTTTGATTATTCTCTACTCTTTTTTTCTCACAAGTTCGATAA
TCAATCTAGAAGAAACGTAT

Downstream 100 bases:

>100_bases
AATGAAAACTCTTATCTCTTCGGATGTTCGTTTGCTTGCGGACCTCATCCGAAAGGGAGGAGTGGTTGTATTTCCCACAG
AAACCGTATTTGGAATTGGT

Product: putative glycosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSESQSPNAPKRPLSNVAKYSLLFASWFFLSAISFYLGMNLMQNSGSSLVLKDLPKTGNTNPSVVEASTPSLGTPSEMET
TNPTDSKPTTSVEEEVMETPNFLPDENVSFRSSAWSTDWTAMKKTVHLYNEIHPFIYTMKGGLSNTGELISTWSTSSRKE
RVQELRALNPNVKIIPTIFRWENPKEKIQENIGMGGRNDIRDHHIQVIVNEIMTYGYDGIDIDYEGMSCDKKEKFEEFFA
LLAKEVHKKGKLISVAVHPKTPAEKSKKKELQCRGLSKPIQLDFRENWRGPTTHDYAFLAKHADRVKIMAYELHPRKYHN
PGPGPQAPNVWLKDIITYAKKRVPTHKLYMAIPTYGYDWALNCKSSAKAIYHSDAQRIKAGTHKNRQPTDINRILNEENK
VASWRNLSKFSDIHKNRAYEDPSLWYTSGGCDRVAFYMNRRAFEEKMTLLRKYDLGGFSFWQLVTDNDPEINVYLSKLVQ
GQLPPVEKAKEEEEPKEETTIQNTESKETVKVSESKPKSKSKTKQF

Sequences:

>Translated_526_residues
MSESQSPNAPKRPLSNVAKYSLLFASWFFLSAISFYLGMNLMQNSGSSLVLKDLPKTGNTNPSVVEASTPSLGTPSEMET
TNPTDSKPTTSVEEEVMETPNFLPDENVSFRSSAWSTDWTAMKKTVHLYNEIHPFIYTMKGGLSNTGELISTWSTSSRKE
RVQELRALNPNVKIIPTIFRWENPKEKIQENIGMGGRNDIRDHHIQVIVNEIMTYGYDGIDIDYEGMSCDKKEKFEEFFA
LLAKEVHKKGKLISVAVHPKTPAEKSKKKELQCRGLSKPIQLDFRENWRGPTTHDYAFLAKHADRVKIMAYELHPRKYHN
PGPGPQAPNVWLKDIITYAKKRVPTHKLYMAIPTYGYDWALNCKSSAKAIYHSDAQRIKAGTHKNRQPTDINRILNEENK
VASWRNLSKFSDIHKNRAYEDPSLWYTSGGCDRVAFYMNRRAFEEKMTLLRKYDLGGFSFWQLVTDNDPEINVYLSKLVQ
GQLPPVEKAKEEEEPKEETTIQNTESKETVKVSESKPKSKSKTKQF
>Mature_525_residues
SESQSPNAPKRPLSNVAKYSLLFASWFFLSAISFYLGMNLMQNSGSSLVLKDLPKTGNTNPSVVEASTPSLGTPSEMETT
NPTDSKPTTSVEEEVMETPNFLPDENVSFRSSAWSTDWTAMKKTVHLYNEIHPFIYTMKGGLSNTGELISTWSTSSRKER
VQELRALNPNVKIIPTIFRWENPKEKIQENIGMGGRNDIRDHHIQVIVNEIMTYGYDGIDIDYEGMSCDKKEKFEEFFAL
LAKEVHKKGKLISVAVHPKTPAEKSKKKELQCRGLSKPIQLDFRENWRGPTTHDYAFLAKHADRVKIMAYELHPRKYHNP
GPGPQAPNVWLKDIITYAKKRVPTHKLYMAIPTYGYDWALNCKSSAKAIYHSDAQRIKAGTHKNRQPTDINRILNEENKV
ASWRNLSKFSDIHKNRAYEDPSLWYTSGGCDRVAFYMNRRAFEEKMTLLRKYDLGGFSFWQLVTDNDPEINVYLSKLVQG
QLPPVEKAKEEEEPKEETTIQNTESKETVKVSESKPKSKSKTKQF

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00704 Glyco_hydro_18 [H]

EC number: NA

Molecular weight: Translated: 60165; Mature: 60034

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESQSPNAPKRPLSNVAKYSLLFASWFFLSAISFYLGMNLMQNSGSSLVLKDLPKTGNT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
NPSVVEASTPSLGTPSEMETTNPTDSKPTTSVEEEVMETPNFLPDENVSFRSSAWSTDWT
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
AMKKTVHLYNEIHPFIYTMKGGLSNTGELISTWSTSSRKERVQELRALNPNVKIIPTIFR
HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEC
WENPKEKIQENIGMGGRNDIRDHHIQVIVNEIMTYGYDGIDIDYEGMSCDKKEKFEEFFA
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
LLAKEVHKKGKLISVAVHPKTPAEKSKKKELQCRGLSKPIQLDFRENWRGPTTHDYAFLA
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCCHHHHH
KHADRVKIMAYELHPRKYHNPGPGPQAPNVWLKDIITYAKKRVPTHKLYMAIPTYGYDWA
HCCCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEE
LNCKSSAKAIYHSDAQRIKAGTHKNRQPTDINRILNEENKVASWRNLSKFSDIHKNRAYE
ECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
DPSLWYTSGGCDRVAFYMNRRAFEEKMTLLRKYDLGGFSFWQLVTDNDPEINVYLSKLVQ
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHC
GQLPPVEKAKEEEEPKEETTIQNTESKETVKVSESKPKSKSKTKQF
CCCCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCHHCCCC
>Mature Secondary Structure 
SESQSPNAPKRPLSNVAKYSLLFASWFFLSAISFYLGMNLMQNSGSSLVLKDLPKTGNT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
NPSVVEASTPSLGTPSEMETTNPTDSKPTTSVEEEVMETPNFLPDENVSFRSSAWSTDWT
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
AMKKTVHLYNEIHPFIYTMKGGLSNTGELISTWSTSSRKERVQELRALNPNVKIIPTIFR
HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEC
WENPKEKIQENIGMGGRNDIRDHHIQVIVNEIMTYGYDGIDIDYEGMSCDKKEKFEEFFA
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
LLAKEVHKKGKLISVAVHPKTPAEKSKKKELQCRGLSKPIQLDFRENWRGPTTHDYAFLA
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCCHHHHH
KHADRVKIMAYELHPRKYHNPGPGPQAPNVWLKDIITYAKKRVPTHKLYMAIPTYGYDWA
HCCCCEEEEEEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEE
LNCKSSAKAIYHSDAQRIKAGTHKNRQPTDINRILNEENKVASWRNLSKFSDIHKNRAYE
ECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
DPSLWYTSGGCDRVAFYMNRRAFEEKMTLLRKYDLGGFSFWQLVTDNDPEINVYLSKLVQ
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHC
GQLPPVEKAKEEEEPKEETTIQNTESKETVKVSESKPKSKSKTKQF
CCCCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]