Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221176
Identifier: 183221176
GI number: 183221176
Start: 1868461
End: 1869561
Strand: Reverse
Name: 183221176
Synonym: LEPBI_I1790
Alternate gene names: NA
Gene position: 1869561-1868461 (Counterclockwise)
Preceding gene: 183221181
Following gene: 183221175
Centisome position: 51.94
GC content: 43.51
Gene sequence:
>1101_bases ATGAAGAAAGTTTACATTCACAATCCATCACTCAGTGTATTCGGTAAACATAAAGGTTCTCAATTAGATTTGTCTTATGC CACCGCAAAACAATCTGTACATGAGTTTCAATCTCACAAAATTCAGTTCATTATTTATGCAAGTTTTTCACCTGATTCTT ATAACAAGGAATACCATCTCTCTGCAAAAATAGCAGCAAGGCTCGGTCTCAAAGATGTTTATTCCATTCGGATGGAAACG GCTTCGTCTTCTGGGGCTTCAGCCTTTCAATTGGGAGTGAATTTAATTCTCAGTGGTCGTTATGATCATGGTCTCGTGAT TGCAACAGAACTCATGTCACAATTGAATCGTGAGGAAAGTAATTTGTTGTTAGGCTCAGTCCTCTCTGACTCTCAAAAAA AATTGGGAATGTCAATGGCACAAGGTGGAGCCATGATTACCAATCGTTACCTTCATGAGTATGGATATTCGAAAGAGGAC TTATTTGCGATTGCGAAAAAACTCCACGACAATGGCCTACAAAATCCAAAAGCCCATATCAAAAAAAATCTAACCATTGA GGAATACGAAAACCAACCAAAAATCGCGAGTCCCTTGGGTCTCTATGATATATCTCCACTTTCGGATGGTTCTGCGGCTC TCATTCTTTCAAAGGATCCAAGTTCCATTCTGGTGCGTGGGATGGGATCTGGCACGGCTCCCTTTCTTTCCTCGGCTGAG CCCAGTTTTTTAGCCAATCGCATTGCCTTTTCCAAAGCATATGAAGGAGCAGGGGTGGACCCAAACGACATTCATTTTGC GGAATTACACGATGCCTTCACTCCTTTTGAGCTCGTAGGGGCTGAGGATGCTGGTTTTTTCAAACGAGGGGAGGCCCTGT TCCAAGTTAAAGCTGGTCTCACCCATCCCAAGGGGAAACTTCCTATCAACGCCTCTGGTGGGCTTAAATCGAGGGGTCAT CCAGTCGGTGCTTCCGGTCTTGCACAGATTGTAGAACTTTGCCGCTTCTTTTCTGAATGGCCCGAAAAGCGGTTGGCAGT AGCACAAAGTATAGGTGGACTAGCTACAAACAACTTTGTGTCGATATTAGAAAGAGTCTGA
Upstream 100 bases:
>100_bases TTACTTCTTTATTTCCCTTCATATGGGTGACCTCTTTTTATCGGTTCAATTGGAAAGATAATTGGTTTTCATGGAATAGG CAAGCGGAAACTATATTCGA
Downstream 100 bases:
>100_bases TGCCTGAAAAAATACTGATCATCCAAACCGCTTTTTTAGGAGATTTGATCCTATCGACCTCCTTTTTCCATGCTGTGAAA ATGGAACACAAGGAAAGCGA
Product: putative acetyl-CoA C-acyltransferase
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKKVYIHNPSLSVFGKHKGSQLDLSYATAKQSVHEFQSHKIQFIIYASFSPDSYNKEYHLSAKIAARLGLKDVYSIRMET ASSSGASAFQLGVNLILSGRYDHGLVIATELMSQLNREESNLLLGSVLSDSQKKLGMSMAQGGAMITNRYLHEYGYSKED LFAIAKKLHDNGLQNPKAHIKKNLTIEEYENQPKIASPLGLYDISPLSDGSAALILSKDPSSILVRGMGSGTAPFLSSAE PSFLANRIAFSKAYEGAGVDPNDIHFAELHDAFTPFELVGAEDAGFFKRGEALFQVKAGLTHPKGKLPINASGGLKSRGH PVGASGLAQIVELCRFFSEWPEKRLAVAQSIGGLATNNFVSILERV
Sequences:
>Translated_366_residues MKKVYIHNPSLSVFGKHKGSQLDLSYATAKQSVHEFQSHKIQFIIYASFSPDSYNKEYHLSAKIAARLGLKDVYSIRMET ASSSGASAFQLGVNLILSGRYDHGLVIATELMSQLNREESNLLLGSVLSDSQKKLGMSMAQGGAMITNRYLHEYGYSKED LFAIAKKLHDNGLQNPKAHIKKNLTIEEYENQPKIASPLGLYDISPLSDGSAALILSKDPSSILVRGMGSGTAPFLSSAE PSFLANRIAFSKAYEGAGVDPNDIHFAELHDAFTPFELVGAEDAGFFKRGEALFQVKAGLTHPKGKLPINASGGLKSRGH PVGASGLAQIVELCRFFSEWPEKRLAVAQSIGGLATNNFVSILERV >Mature_366_residues MKKVYIHNPSLSVFGKHKGSQLDLSYATAKQSVHEFQSHKIQFIIYASFSPDSYNKEYHLSAKIAARLGLKDVYSIRMET ASSSGASAFQLGVNLILSGRYDHGLVIATELMSQLNREESNLLLGSVLSDSQKKLGMSMAQGGAMITNRYLHEYGYSKED LFAIAKKLHDNGLQNPKAHIKKNLTIEEYENQPKIASPLGLYDISPLSDGSAALILSKDPSSILVRGMGSGTAPFLSSAE PSFLANRIAFSKAYEGAGVDPNDIHFAELHDAFTPFELVGAEDAGFFKRGEALFQVKAGLTHPKGKLPINASGGLKSRGH PVGASGLAQIVELCRFFSEWPEKRLAVAQSIGGLATNNFVSILERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=300, Percent_Identity=28.6666666666667, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI302344760, Length=300, Percent_Identity=28.6666666666667, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI302344767, Length=204, Percent_Identity=32.3529411764706, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI302344762, Length=204, Percent_Identity=32.3529411764706, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI55956775, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17537653, Length=300, Percent_Identity=30.3333333333333, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24585051, Length=369, Percent_Identity=25.7452574525745, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI19921506, Length=303, Percent_Identity=28.0528052805281, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 39723; Mature: 39723
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYIHNPSLSVFGKHKGSQLDLSYATAKQSVHEFQSHKIQFIIYASFSPDSYNKEYHL CCEEEEECCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEE SAKIAARLGLKDVYSIRMETASSSGASAFQLGVNLILSGRYDHGLVIATELMSQLNREES HHHHHHHHCHHHHHHHHHHCCCCCCCHHHEECEEEEEECCCCCCEEEHHHHHHHHCCCHH NLLLGSVLSDSQKKLGMSMAQGGAMITNRYLHEYGYSKEDLFAIAKKLHDNGLQNPKAHI CEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH KKNLTIEEYENQPKIASPLGLYDISPLSDGSAALILSKDPSSILVRGMGSGTAPFLSSAE HCCCCHHHHCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC PSFLANRIAFSKAYEGAGVDPNDIHFAELHDAFTPFELVGAEDAGFFKRGEALFQVKAGL HHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCCHHCCCEEEEEECCC THPKGKLPINASGGLKSRGHPVGASGLAQIVELCRFFSEWPEKRLAVAQSIGGLATNNFV CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH SILERV HHHHCC >Mature Secondary Structure MKKVYIHNPSLSVFGKHKGSQLDLSYATAKQSVHEFQSHKIQFIIYASFSPDSYNKEYHL CCEEEEECCCEEEEECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEE SAKIAARLGLKDVYSIRMETASSSGASAFQLGVNLILSGRYDHGLVIATELMSQLNREES HHHHHHHHCHHHHHHHHHHCCCCCCCHHHEECEEEEEECCCCCCEEEHHHHHHHHCCCHH NLLLGSVLSDSQKKLGMSMAQGGAMITNRYLHEYGYSKEDLFAIAKKLHDNGLQNPKAHI CEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH KKNLTIEEYENQPKIASPLGLYDISPLSDGSAALILSKDPSSILVRGMGSGTAPFLSSAE HCCCCHHHHCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC PSFLANRIAFSKAYEGAGVDPNDIHFAELHDAFTPFELVGAEDAGFFKRGEALFQVKAGL HHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCCHHCCCEEEEEECCC THPKGKLPINASGGLKSRGHPVGASGLAQIVELCRFFSEWPEKRLAVAQSIGGLATNNFV CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH SILERV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]