Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221155
Identifier: 183221155
GI number: 183221155
Start: 1847833
End: 1848837
Strand: Reverse
Name: 183221155
Synonym: LEPBI_I1769
Alternate gene names: NA
Gene position: 1848837-1847833 (Counterclockwise)
Preceding gene: 183221158
Following gene: 183221154
Centisome position: 51.36
GC content: 41.39
Gene sequence:
>1005_bases ATGATTTTCAAATCAAAATGGCATTCGGGGTTCCTACTTTTCTGTAGTTCGTTTTTCCCTCTCCTTCCGATCCACGCACA AATTTCGGGTTACGATGTTGCATTCCCTTCTGCCTATTTGCTTGGTCTTTCCTCACAAGGAGTTGTGAGCACTCATGCGA TGGGAAGTATATATGGGAACACAGCATTTCTTTCATTCCAGAACAAACATATTTTGGATGTATCATCAAGTGGAAGTTAT GCGAATCCAAATCTTTCTCCAGTTTATATTTCGGGAGCAGGTTATGTTTCGTTTTCGGAGTCATTTGGGTTTGGATTTCG TGGGAAACCAGTTTACTTACGATCCTTTCCATCTGATGAACGTTATTCGAATTATGCCTTTCAGGCATTTGCCAATTGGA AACTCAATCCATACATTTCCTTTGCCTTACATTTAGGACCTGGTGTTTCAGGAAGGCTTGGTGGGTATAGTTCCTATTCT TGGAATGTTTCCCTTTCGACAGCGATCCAATATGAACAGTTTCGACTTGGGGTATTGTTAGAATCACCTGGATCCTATCG ATATGATCAATTCTTGGGATCGGAACGCCTAAATGAAAAATTACCGGAACGAGTCTTACTTGGTTTGGGATACAAATGGA ATGAATGGTTGGAATTCCAACTAGAGGGGTCACGAAAATTTTATGAAAGAACAAGTGTCCGTCTCAATGAATCCAATCAA TACATTCCTTATGCTGTGAGAACTATGTATTCGGGAAATTTCAGTATTGCCGTAGGTAAAATAGAATCCATCCAACTACT AACAGGTGTTGGTCGAGAGATCAGGATGGATCGGACTTTGCGTGGGTTTTATACTGCATCCATCGGGATTGTTGGATCCT TATTTCCAAGTTGGTTTGGCGAAGGTTATTTTTATGCCCTATCAGTCCAAAGAGCAGGTTTGAGTGTCCCGGAAAGAGAG GGTGCCGAAACTCGAATGGCCTTCCAATTGCAGTTTCAGTTCTAA
Upstream 100 bases:
>100_bases AAGGAATACCAACCTTGAGGGGAACGAAATTGTTTGTACATTGGTTTTGTCATCAGAAATCCCTTTTCTTTCCAGTAAAT TCATGAAGGAATGGCAGTAA
Downstream 100 bases:
>100_bases TCAAGAACACCATTTGCTTAAAAGATAAACAAATTGGCTGTTTTCCATAAACAAGCCGTTGACGTTTTGTGCAAATTCCA TCCAGTTTGTAGAGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MIFKSKWHSGFLLFCSSFFPLLPIHAQISGYDVAFPSAYLLGLSSQGVVSTHAMGSIYGNTAFLSFQNKHILDVSSSGSY ANPNLSPVYISGAGYVSFSESFGFGFRGKPVYLRSFPSDERYSNYAFQAFANWKLNPYISFALHLGPGVSGRLGGYSSYS WNVSLSTAIQYEQFRLGVLLESPGSYRYDQFLGSERLNEKLPERVLLGLGYKWNEWLEFQLEGSRKFYERTSVRLNESNQ YIPYAVRTMYSGNFSIAVGKIESIQLLTGVGREIRMDRTLRGFYTASIGIVGSLFPSWFGEGYFYALSVQRAGLSVPERE GAETRMAFQLQFQF
Sequences:
>Translated_334_residues MIFKSKWHSGFLLFCSSFFPLLPIHAQISGYDVAFPSAYLLGLSSQGVVSTHAMGSIYGNTAFLSFQNKHILDVSSSGSY ANPNLSPVYISGAGYVSFSESFGFGFRGKPVYLRSFPSDERYSNYAFQAFANWKLNPYISFALHLGPGVSGRLGGYSSYS WNVSLSTAIQYEQFRLGVLLESPGSYRYDQFLGSERLNEKLPERVLLGLGYKWNEWLEFQLEGSRKFYERTSVRLNESNQ YIPYAVRTMYSGNFSIAVGKIESIQLLTGVGREIRMDRTLRGFYTASIGIVGSLFPSWFGEGYFYALSVQRAGLSVPERE GAETRMAFQLQFQF >Mature_334_residues MIFKSKWHSGFLLFCSSFFPLLPIHAQISGYDVAFPSAYLLGLSSQGVVSTHAMGSIYGNTAFLSFQNKHILDVSSSGSY ANPNLSPVYISGAGYVSFSESFGFGFRGKPVYLRSFPSDERYSNYAFQAFANWKLNPYISFALHLGPGVSGRLGGYSSYS WNVSLSTAIQYEQFRLGVLLESPGSYRYDQFLGSERLNEKLPERVLLGLGYKWNEWLEFQLEGSRKFYERTSVRLNESNQ YIPYAVRTMYSGNFSIAVGKIESIQLLTGVGREIRMDRTLRGFYTASIGIVGSLFPSWFGEGYFYALSVQRAGLSVPERE GAETRMAFQLQFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37586; Mature: 37586
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKSKWHSGFLLFCSSFFPLLPIHAQISGYDVAFPSAYLLGLSSQGVVSTHAMGSIYGN CCCCCCCCCCHHEEHHCCCCCEEEEEEECCEEEECCCEEEEECCCCCEEEEECCCEECCC TAFLSFQNKHILDVSSSGSYANPNLSPVYISGAGYVSFSESFGFGFRGKPVYLRSFPSDE EEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCC RYSNYAFQAFANWKLNPYISFALHLGPGVSGRLGGYSSYSWNVSLSTAIQYEQFRLGVLL CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEE ESPGSYRYDQFLGSERLNEKLPERVLLGLGYKWNEWLEFQLEGSRKFYERTSVRLNESNQ ECCCCCCHHHHHCHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCC YIPYAVRTMYSGNFSIAVGKIESIQLLTGVGREIRMDRTLRGFYTASIGIVGSLFPSWFG CCCEEEEEEECCCEEEEEECCCEEEEECCCCCEEEECCHHHEEEEEHHHHHHHHHHHHCC EGYFYALSVQRAGLSVPEREGAETRMAFQLQFQF CCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MIFKSKWHSGFLLFCSSFFPLLPIHAQISGYDVAFPSAYLLGLSSQGVVSTHAMGSIYGN CCCCCCCCCCHHEEHHCCCCCEEEEEEECCEEEECCCEEEEECCCCCEEEEECCCEECCC TAFLSFQNKHILDVSSSGSYANPNLSPVYISGAGYVSFSESFGFGFRGKPVYLRSFPSDE EEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCC RYSNYAFQAFANWKLNPYISFALHLGPGVSGRLGGYSSYSWNVSLSTAIQYEQFRLGVLL CCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEE ESPGSYRYDQFLGSERLNEKLPERVLLGLGYKWNEWLEFQLEGSRKFYERTSVRLNESNQ ECCCCCCHHHHHCHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCC YIPYAVRTMYSGNFSIAVGKIESIQLLTGVGREIRMDRTLRGFYTASIGIVGSLFPSWFG CCCEEEEEEECCCEEEEEECCCEEEEECCCCCEEEECCHHHEEEEEHHHHHHHHHHHHCC EGYFYALSVQRAGLSVPEREGAETRMAFQLQFQF CCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA