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The map label for this gene is yfgC [C]

Identifier: 183220894

GI number: 183220894

Start: 1569070

End: 1570389

Strand: Direct

Name: yfgC [C]

Synonym: LEPBI_I1507

Alternate gene names: 183220894

Gene position: 1569070-1570389 (Clockwise)

Preceding gene: 183220891

Following gene: 183220895

Centisome position: 43.59

GC content: 40.61

Gene sequence:

>1320_bases
ATGGTACGACTTGGATTGTCAATTCGAAAGTCAAAATTAAAAAAAGAGTTTCCAAAGTTTGAATCACACACAGATTCAAT
GGAAATGCGATTGAAGACATTCACTTATCTATTATTATTCCTTGGGATTTCACTCCTTGCGAAAGGAAATGTGTATGTAC
AAAGCAACAAAGCAAAGTTACTCACCCAACCAAAATTAAATGCGGAAGGGAGTGGGTTAAAAATAGGAGAAGTACTAACA
CCCATCACCGAACAAGGTCTTTTTGTCCAAGTCAGAGTGGAAGAGAAAACAGGTTGGGTGTCCAAGTTATTTGTATCACC
TCTCCCTCCAGGGAACCAGATGAAACTTGGGATCACATCCAATTCTTCGGAAGCAGTGGTGGCAAGGCAAAGGGCATCCG
ATTTTACAAAAACAGCGGCAGCTCGGGGACTTTCTGAAACGCAAAAAATGCGAGTGAGAGGGGAAGGGGATTTATATGAT
TTTGAATCCTTACGTTGGTTAGAGTCTGTTCCTTTGAATCAAGAAAGTCCATTCTCCAAAGAAGAAAAAAATTCGCCCAG
TGTTTCTGTAACAGAAAAGCAATCACCAATGTTTTGGATGAGCCCAGGATTACCAGTGTTAGCTGAGACGAAAGCAGAAG
TGAAAATGGGTCGTTCTCTTGCGGCAAGGTTATTAAAAAAATACAATTTGGTCCGGGATTTAGAATTCACCCGTTATTTA
AACTCCATCGCGTTTCGGTTGGGTTCCGCTTCTTCTAGGAAAGATTTGGAATTTCGCGTGGGCGTCATTGAATCCAATGA
AATCAATGCCTTCTCTTGCCCGGGTGGGTATTTGTTTTTGACCACAGGCACATTAAAAAAGATCCAAACGGAAGCAGAAC
TTGCGGGTATCATTGCCCATGAAATGGGTCACGTAATTTTATTCCATAATGGAGAATTTAAAGAATCGAATGTATTTGTG
GACATCCTTTCTGGACTTCTCTCTCCTCCTGGAAGCGAAGTAGTCAACACTGCGATGGCAACTGCCATCACCGAGATGGA
AAAACAATTTTTTGAAACAGGGCGAGATGCAAAATTAGAATTAGAAGCAGATGAAGCGGCAGTGGGACTTGTCTCACAAG
TTGGGTATTCTCCTTTAGGATTATCCAGTTATTTGAATACAATGTCCAAATTAGATGGAACAGAAACTTTAAAAAAAACG
CATCCTGAAACTAATCTTCGCATCGCAAAACTAGTGTTTATTGAATCTTCTGTACCAACGGAGGGAACTCCTTTTGTTGT
GGATCGTTGGAGCGAATATAAAAATAAAATCGGCAAATGA

Upstream 100 bases:

>100_bases
TGAGTGAATTACTTTCATCTTTTTCTTTTTTACAACCGACTAGGATTAAAACGGAAAGTAAGAGGAATAGAAAAAAACGT
TTCATCAGTCCATCATCAGA

Downstream 100 bases:

>100_bases
AACAAAATAAAATTCTAATTCCAATCTTTCTAATGGTCGTGATCCCCACGCTGATCACAACTTTCCTTTCTTTTTTTCGA
TTTTCAACTACCTTAGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: M48 Family Peptidase; TPR Repeat-Containing Zn-Dependent Protease; Peptidase Lipoprotein; Zn-Dependent Protease; Zinc Metalloprotease; Peptidase M; TPR Repeat-Containing Protein; M48B Family Peptidase; Metalloprotease Protein; Peptidase Family M; Protease; Zn-Dependent Protease With Chaperone Function; TPR Domain-Containing Protein

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MVRLGLSIRKSKLKKEFPKFESHTDSMEMRLKTFTYLLLFLGISLLAKGNVYVQSNKAKLLTQPKLNAEGSGLKIGEVLT
PITEQGLFVQVRVEEKTGWVSKLFVSPLPPGNQMKLGITSNSSEAVVARQRASDFTKTAAARGLSETQKMRVRGEGDLYD
FESLRWLESVPLNQESPFSKEEKNSPSVSVTEKQSPMFWMSPGLPVLAETKAEVKMGRSLAARLLKKYNLVRDLEFTRYL
NSIAFRLGSASSRKDLEFRVGVIESNEINAFSCPGGYLFLTTGTLKKIQTEAELAGIIAHEMGHVILFHNGEFKESNVFV
DILSGLLSPPGSEVVNTAMATAITEMEKQFFETGRDAKLELEADEAAVGLVSQVGYSPLGLSSYLNTMSKLDGTETLKKT
HPETNLRIAKLVFIESSVPTEGTPFVVDRWSEYKNKIGK

Sequences:

>Translated_439_residues
MVRLGLSIRKSKLKKEFPKFESHTDSMEMRLKTFTYLLLFLGISLLAKGNVYVQSNKAKLLTQPKLNAEGSGLKIGEVLT
PITEQGLFVQVRVEEKTGWVSKLFVSPLPPGNQMKLGITSNSSEAVVARQRASDFTKTAAARGLSETQKMRVRGEGDLYD
FESLRWLESVPLNQESPFSKEEKNSPSVSVTEKQSPMFWMSPGLPVLAETKAEVKMGRSLAARLLKKYNLVRDLEFTRYL
NSIAFRLGSASSRKDLEFRVGVIESNEINAFSCPGGYLFLTTGTLKKIQTEAELAGIIAHEMGHVILFHNGEFKESNVFV
DILSGLLSPPGSEVVNTAMATAITEMEKQFFETGRDAKLELEADEAAVGLVSQVGYSPLGLSSYLNTMSKLDGTETLKKT
HPETNLRIAKLVFIESSVPTEGTPFVVDRWSEYKNKIGK
>Mature_439_residues
MVRLGLSIRKSKLKKEFPKFESHTDSMEMRLKTFTYLLLFLGISLLAKGNVYVQSNKAKLLTQPKLNAEGSGLKIGEVLT
PITEQGLFVQVRVEEKTGWVSKLFVSPLPPGNQMKLGITSNSSEAVVARQRASDFTKTAAARGLSETQKMRVRGEGDLYD
FESLRWLESVPLNQESPFSKEEKNSPSVSVTEKQSPMFWMSPGLPVLAETKAEVKMGRSLAARLLKKYNLVRDLEFTRYL
NSIAFRLGSASSRKDLEFRVGVIESNEINAFSCPGGYLFLTTGTLKKIQTEAELAGIIAHEMGHVILFHNGEFKESNVFV
DILSGLLSPPGSEVVNTAMATAITEMEKQFFETGRDAKLELEADEAAVGLVSQVGYSPLGLSSYLNTMSKLDGTETLKKT
HPETNLRIAKLVFIESSVPTEGTPFVVDRWSEYKNKIGK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788840, Length=213, Percent_Identity=24.8826291079812, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48639; Mature: 48639

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLGLSIRKSKLKKEFPKFESHTDSMEMRLKTFTYLLLFLGISLLAKGNVYVQSNKAKL
CEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE
LTQPKLNAEGSGLKIGEVLTPITEQGLFVQVRVEEKTGWVSKLFVSPLPPGNQMKLGITS
EECCCCCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEC
NSSEAVVARQRASDFTKTAAARGLSETQKMRVRGEGDLYDFESLRWLESVPLNQESPFSK
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC
EEKNSPSVSVTEKQSPMFWMSPGLPVLAETKAEVKMGRSLAARLLKKYNLVRDLEFTRYL
CCCCCCCEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSIAFRLGSASSRKDLEFRVGVIESNEINAFSCPGGYLFLTTGTLKKIQTEAELAGIIAH
HHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHH
EMGHVILFHNGEFKESNVFVDILSGLLSPPGSEVVNTAMATAITEMEKQFFETGRDAKLE
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LEADEAAVGLVSQVGYSPLGLSSYLNTMSKLDGTETLKKTHPETNLRIAKLVFIESSVPT
EECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEECCCCC
EGTPFVVDRWSEYKNKIGK
CCCCCEEECHHHHHHHCCC
>Mature Secondary Structure
MVRLGLSIRKSKLKKEFPKFESHTDSMEMRLKTFTYLLLFLGISLLAKGNVYVQSNKAKL
CEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE
LTQPKLNAEGSGLKIGEVLTPITEQGLFVQVRVEEKTGWVSKLFVSPLPPGNQMKLGITS
EECCCCCCCCCCEEHHHHHCCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEC
NSSEAVVARQRASDFTKTAAARGLSETQKMRVRGEGDLYDFESLRWLESVPLNQESPFSK
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC
EEKNSPSVSVTEKQSPMFWMSPGLPVLAETKAEVKMGRSLAARLLKKYNLVRDLEFTRYL
CCCCCCCEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSIAFRLGSASSRKDLEFRVGVIESNEINAFSCPGGYLFLTTGTLKKIQTEAELAGIIAH
HHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHH
EMGHVILFHNGEFKESNVFVDILSGLLSPPGSEVVNTAMATAITEMEKQFFETGRDAKLE
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LEADEAAVGLVSQVGYSPLGLSSYLNTMSKLDGTETLKKTHPETNLRIAKLVFIESSVPT
EECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEEEECCCCC
EGTPFVVDRWSEYKNKIGK
CCCCCEEECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA