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The map label for this gene is nlpC [H]

Identifier: 183220890

GI number: 183220890

Start: 1563789

End: 1565051

Strand: Direct

Name: nlpC [H]

Synonym: LEPBI_I1503

Alternate gene names: 183220890

Gene position: 1563789-1565051 (Clockwise)

Preceding gene: 183220889

Following gene: 183220891

Centisome position: 43.44

GC content: 39.98

Gene sequence:

>1263_bases
ATGTCCTTAGTTCCTTTCATCCGTTCCTTTATTAGAACTTATTTGTTTTTGGGATTCCTATTGCCTTCCGTTTTGTTTGC
ACAAAACCTCGACAGCTTACTTGAGTCAGGTTATAACAAACAAGAAACTTTACTCATCAGGAGTGAGATCCGAAAAAAAC
TAGGAGACCGCACCAACCAAAAAGAAATCCAAAACATCATCCAATCCCTGCGAGTTTGGGCCGTCTTTGAGTCGATGCCA
GCTACTGAGTTTGCATTGGAGGTAGAACGGTTTGTGATTTTGGCTGACCATGGCTATCAGTGGGAAGAAACGGAAGACCT
GATTCCGTATTTTATTACCGCAAAACCAAACAAAACAGAAATTCCTTATCTTGGAAAATTCTATCGTGAGATGAAGTTAA
GCCAAGTACCAGAAGATGAGATCTTACAGTTTTTCCAAATCGCAAAAAAAAGGCGATGGAGTGGGGATACAGTTTTTGTT
GCAGGTAGATTCTATGTCCTACTTCGGAAATCAGAGCCTAATTCTAGTTTGATTTTCAACGTTTTGGAAAATAAATTACC
TAAAAAAATAACTTCACTCAGTTCCGAAAAACAAAAGAAACTCTTTTCTGAATTCAAAGCAGAATCAAAAGCAGATCCGA
ATGAATCCAATTGGAAATTGGTGGTGGAGGATATATTGGCTGTGTTATCTGGAAAAAATTCCTTGAATGATTTTAAGGTA
TCAGATCGTAGAACAGAGATCATCTGGAATGAAGAAGGGGAATGGATCACGAAAGAACGCCCTAGACTTGACCCTAGTCT
TATTTTTATCGAGGAACAATCGAACCAAACGACTGTCACAACCACAAACGAAGGCCAAAAGGAATCCAAACGAAAATTGG
TTGATCCCGTAGGAAGGCAGTGGGTCGGTACACCTTACCTGTATGGAGGGTATTCCAAACGGGGGATTGATTGTTCTGGT
CTCACCAAATCCATATTAACCGATCCAAAAATTGGTATGAAGGGAAAGGCCATACCTCGTTCTGCAAAAGACCAGTCCCT
CATCGGCAAATTTGTTCCAAGAGAAAAACAAACAATAGGCAATTTAGTTTTTTTCTCCGCCTCACCGAATGCCAAAAAAA
TCACTCATGTAGGACTTGTTTTGGATAATGGAAATTTCATTCATGCATCCACAAGCAGAGGGGTTGTGGTCCAATCTCTA
GAGGAAAAATGGTGGAAGGAACGGTATGTGACAGGAAGAGATATCTTTACAGGTAACAATTGA

Upstream 100 bases:

>100_bases
AACTTGGTTACATTTCTTCGGTTGGAAAAATCAAAATGAACCGCGAGAAATTTATAAATCCTTCTTTACAATAAGCTGGG
CAAACAATACTTCTTGGGTC

Downstream 100 bases:

>100_bases
TATGGCAAAAAAGAAAGCATTGGTTCTCTCGGGTGGTGGGGCAAGAGGAGCCTACCAAGCAGGTGTTTTACGGTATTTAG
AAGAAATCCATTGGAAACCC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSLVPFIRSFIRTYLFLGFLLPSVLFAQNLDSLLESGYNKQETLLIRSEIRKKLGDRTNQKEIQNIIQSLRVWAVFESMP
ATEFALEVERFVILADHGYQWEETEDLIPYFITAKPNKTEIPYLGKFYREMKLSQVPEDEILQFFQIAKKRRWSGDTVFV
AGRFYVLLRKSEPNSSLIFNVLENKLPKKITSLSSEKQKKLFSEFKAESKADPNESNWKLVVEDILAVLSGKNSLNDFKV
SDRRTEIIWNEEGEWITKERPRLDPSLIFIEEQSNQTTVTTTNEGQKESKRKLVDPVGRQWVGTPYLYGGYSKRGIDCSG
LTKSILTDPKIGMKGKAIPRSAKDQSLIGKFVPREKQTIGNLVFFSASPNAKKITHVGLVLDNGNFIHASTSRGVVVQSL
EEKWWKERYVTGRDIFTGNN

Sequences:

>Translated_420_residues
MSLVPFIRSFIRTYLFLGFLLPSVLFAQNLDSLLESGYNKQETLLIRSEIRKKLGDRTNQKEIQNIIQSLRVWAVFESMP
ATEFALEVERFVILADHGYQWEETEDLIPYFITAKPNKTEIPYLGKFYREMKLSQVPEDEILQFFQIAKKRRWSGDTVFV
AGRFYVLLRKSEPNSSLIFNVLENKLPKKITSLSSEKQKKLFSEFKAESKADPNESNWKLVVEDILAVLSGKNSLNDFKV
SDRRTEIIWNEEGEWITKERPRLDPSLIFIEEQSNQTTVTTTNEGQKESKRKLVDPVGRQWVGTPYLYGGYSKRGIDCSG
LTKSILTDPKIGMKGKAIPRSAKDQSLIGKFVPREKQTIGNLVFFSASPNAKKITHVGLVLDNGNFIHASTSRGVVVQSL
EEKWWKERYVTGRDIFTGNN
>Mature_419_residues
SLVPFIRSFIRTYLFLGFLLPSVLFAQNLDSLLESGYNKQETLLIRSEIRKKLGDRTNQKEIQNIIQSLRVWAVFESMPA
TEFALEVERFVILADHGYQWEETEDLIPYFITAKPNKTEIPYLGKFYREMKLSQVPEDEILQFFQIAKKRRWSGDTVFVA
GRFYVLLRKSEPNSSLIFNVLENKLPKKITSLSSEKQKKLFSEFKAESKADPNESNWKLVVEDILAVLSGKNSLNDFKVS
DRRTEIIWNEEGEWITKERPRLDPSLIFIEEQSNQTTVTTTNEGQKESKRKLVDPVGRQWVGTPYLYGGYSKRGIDCSGL
TKSILTDPKIGMKGKAIPRSAKDQSLIGKFVPREKQTIGNLVFFSASPNAKKITHVGLVLDNGNFIHASTSRGVVVQSLE
EKWWKERYVTGRDIFTGNN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=117, Percent_Identity=38.4615384615385, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788001, Length=115, Percent_Identity=38.2608695652174, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1787944, Length=123, Percent_Identity=35.7723577235772, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 48227; Mature: 48096

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVPFIRSFIRTYLFLGFLLPSVLFAQNLDSLLESGYNKQETLLIRSEIRKKLGDRTNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCH
KEIQNIIQSLRVWAVFESMPATEFALEVERFVILADHGYQWEETEDLIPYFITAKPNKTE
HHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCC
IPYLGKFYREMKLSQVPEDEILQFFQIAKKRRWSGDTVFVAGRFYVLLRKSEPNSSLIFN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHH
VLENKLPKKITSLSSEKQKKLFSEFKAESKADPNESNWKLVVEDILAVLSGKNSLNDFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
SDRRTEIIWNEEGEWITKERPRLDPSLIFIEEQSNQTTVTTTNEGQKESKRKLVDPVGRQ
CCCCEEEEECCCCCEECCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH
WVGTPYLYGGYSKRGIDCSGLTKSILTDPKIGMKGKAIPRSAKDQSLIGKFVPREKQTIG
HCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHC
NLVFFSASPNAKKITHVGLVLDNGNFIHASTSRGVVVQSLEEKWWKERYVTGRDIFTGNN
CEEEEECCCCCCEEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure 
SLVPFIRSFIRTYLFLGFLLPSVLFAQNLDSLLESGYNKQETLLIRSEIRKKLGDRTNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCH
KEIQNIIQSLRVWAVFESMPATEFALEVERFVILADHGYQWEETEDLIPYFITAKPNKTE
HHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCC
IPYLGKFYREMKLSQVPEDEILQFFQIAKKRRWSGDTVFVAGRFYVLLRKSEPNSSLIFN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHH
VLENKLPKKITSLSSEKQKKLFSEFKAESKADPNESNWKLVVEDILAVLSGKNSLNDFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
SDRRTEIIWNEEGEWITKERPRLDPSLIFIEEQSNQTTVTTTNEGQKESKRKLVDPVGRQ
CCCCEEEEECCCCCEECCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH
WVGTPYLYGGYSKRGIDCSGLTKSILTDPKIGMKGKAIPRSAKDQSLIGKFVPREKQTIG
HCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHC
NLVFFSASPNAKKITHVGLVLDNGNFIHASTSRGVVVQSLEEKWWKERYVTGRDIFTGNN
CEEEEECCCCCCEEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]