| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220816
Identifier: 183220816
GI number: 183220816
Start: 1490744
End: 1492495
Strand: Direct
Name: 183220816
Synonym: LEPBI_I1428
Alternate gene names: NA
Gene position: 1490744-1492495 (Clockwise)
Preceding gene: 183220814
Following gene: 183220822
Centisome position: 41.41
GC content: 41.61
Gene sequence:
>1752_bases ATGAAACAATGGATTTTGTTTTTTTCCATTTTTATTGGGAGTGGATTTTTATTTGCCAAGGAACAGGGTGAATTTCCTTC CGATTGGACTTCCGTCTCACCTACGTTTTCCTATCCTTCCGTTTTTTCCTTCCCAGAATCGGAATCGGTGGAACTCTTTG AATCCCTTTTGCAGTCTCGGAACCATTTATACTTCCAAACGAGAACCAAAGAAAAACAAATTACCATTTATGAATACAAT TTAGAGACGAAGGAAATCCATCCAAAACCTTGGGACAAAGGAAAAATCCTTGGATGGACTGAGTGTAACAGTGAACTCTT AATTCAAACCAAACAGAAGTTATATGCTCTGCAACCAAAGTCTTGGGAAATCAAAAAGGAATACAACCTTCCTTCCCCAT CTTCCAGTTGGAAAGACATCATTTGTTCGGGAGGAAATTTGGTTCGATTGGAGAAAGACCAATTACAACAAGTCCACTTG GAAAGTTTGGAAGAAAGGCCTTTCCTCCCTCTCCCAATGAAATCGGTGCAAAGGATTGTGAAAGTAAATGAAACAGAAAT TTTACTCATCTCATCCTTTTCTGGCAATACCATCCAGTTGTTTTCACTTCCCGACCAAAAGACAAAAAAGGAGTGGAAAT TCCCAACAAACCACAGAGCCCTTTTCAAACTCACAAGTCTGAAGGAAGATCGATTTTTGGTATTTGATCCTATCACAAAG ATTTATGGAGAATGGATTATGTTTGATGATCATATTTTCCCGATCGTTGGTCTCTCCAAACGTTCCGATGGCAAAGCAGT CAGATTTTCTCCGATTGAATCCACGATACAATACCAATTGGAACTTTCGGCTACAAGTGAGATCAGAGAAACCAAGTTGG TTGTGGTCCTTCCCAAAAAAGATACCTATTCGCAGGAATTGAGAGCGGAAACCTTCTATTCTCCGAGTGTCTTTGGATTG GATGAAACGGGGAATCGCACCTTGATGTTCACCATACCCGCCATGAAAGAAGGGGAATCCAAACTTCTCTCTCTTTACCA AGGTAACCTCACACGTTACAAAATCCATTGGAAACTGGATCCAAATTCTTTAGTCAATCGAGTGGAAAACGAATCCAAAT TTCCAAATGAACTCCGCGATGATTGGTTTGTGAAACTAGAAGATCCAATTGTGGTGGGAAAAAGAGACGAACTTTTCCAA GGGAAAACGACTCTTTTGGAGATCCTTTCGGAAACAGCAAAGTATGTTTCAAGTATCCCTTACCAATCAGGGAAATTTGA AGCGGCTCCATATGTGATTTTAAAAAACAATGGTGGGTGCACGGAACATTCTTACGTCACCATGTCTTTGTTACGTGGTA TGGGAATCCCAACACGTCTTGTTTGGAACTACTTGCCTACAGAGTCTTCGAGTGAGATGAGTTTCAATCATAAATATGTG GAAGTTTGGGTGGATGGATTGGGATGGATTCCCTTGGAACCACTTGCTCCCCCTAAATCCAAACCTGGTGTGACCCATGC GAGGCATTTGGTATTTGCTGTTTTACCAAAGCCTACCCATCCCAAAATTGTGGGTGGGGACAGGTTAGTCCAAATTGCAA AAGACCAAATCCCACTCGGGAAACAATTAAAGATGAAACTGACGATCCTAAAAAAAGAAACAGGGGATCGATTGGAAGAG GAAATCGGCATCCAACCGAACCGAATCCGAACAAGGGCCATCCAAGCTGGTGAGGATCTCGTGGTTCCTTGA
Upstream 100 bases:
>100_bases TAAGATCCGTTCTCCAAAGTAAAAAAGACTTCCTTTTCTTTTGCCATCCATATACTAAAAAAATCTTATCGAAGGTTTTG AAAAAGGCAAGGATTATCGA
Downstream 100 bases:
>100_bases TGAGACTCGGGAACCTACCGACTATGAGAAAATAATTTACTTTCGCAAAACATAGTTTTCACCATTTTTGGGGCCTGACT TACGAATGAAGAGGCGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKQWILFFSIFIGSGFLFAKEQGEFPSDWTSVSPTFSYPSVFSFPESESVELFESLLQSRNHLYFQTRTKEKQITIYEYN LETKEIHPKPWDKGKILGWTECNSELLIQTKQKLYALQPKSWEIKKEYNLPSPSSSWKDIICSGGNLVRLEKDQLQQVHL ESLEERPFLPLPMKSVQRIVKVNETEILLISSFSGNTIQLFSLPDQKTKKEWKFPTNHRALFKLTSLKEDRFLVFDPITK IYGEWIMFDDHIFPIVGLSKRSDGKAVRFSPIESTIQYQLELSATSEIRETKLVVVLPKKDTYSQELRAETFYSPSVFGL DETGNRTLMFTIPAMKEGESKLLSLYQGNLTRYKIHWKLDPNSLVNRVENESKFPNELRDDWFVKLEDPIVVGKRDELFQ GKTTLLEILSETAKYVSSIPYQSGKFEAAPYVILKNNGGCTEHSYVTMSLLRGMGIPTRLVWNYLPTESSSEMSFNHKYV EVWVDGLGWIPLEPLAPPKSKPGVTHARHLVFAVLPKPTHPKIVGGDRLVQIAKDQIPLGKQLKMKLTILKKETGDRLEE EIGIQPNRIRTRAIQAGEDLVVP
Sequences:
>Translated_583_residues MKQWILFFSIFIGSGFLFAKEQGEFPSDWTSVSPTFSYPSVFSFPESESVELFESLLQSRNHLYFQTRTKEKQITIYEYN LETKEIHPKPWDKGKILGWTECNSELLIQTKQKLYALQPKSWEIKKEYNLPSPSSSWKDIICSGGNLVRLEKDQLQQVHL ESLEERPFLPLPMKSVQRIVKVNETEILLISSFSGNTIQLFSLPDQKTKKEWKFPTNHRALFKLTSLKEDRFLVFDPITK IYGEWIMFDDHIFPIVGLSKRSDGKAVRFSPIESTIQYQLELSATSEIRETKLVVVLPKKDTYSQELRAETFYSPSVFGL DETGNRTLMFTIPAMKEGESKLLSLYQGNLTRYKIHWKLDPNSLVNRVENESKFPNELRDDWFVKLEDPIVVGKRDELFQ GKTTLLEILSETAKYVSSIPYQSGKFEAAPYVILKNNGGCTEHSYVTMSLLRGMGIPTRLVWNYLPTESSSEMSFNHKYV EVWVDGLGWIPLEPLAPPKSKPGVTHARHLVFAVLPKPTHPKIVGGDRLVQIAKDQIPLGKQLKMKLTILKKETGDRLEE EIGIQPNRIRTRAIQAGEDLVVP >Mature_583_residues MKQWILFFSIFIGSGFLFAKEQGEFPSDWTSVSPTFSYPSVFSFPESESVELFESLLQSRNHLYFQTRTKEKQITIYEYN LETKEIHPKPWDKGKILGWTECNSELLIQTKQKLYALQPKSWEIKKEYNLPSPSSSWKDIICSGGNLVRLEKDQLQQVHL ESLEERPFLPLPMKSVQRIVKVNETEILLISSFSGNTIQLFSLPDQKTKKEWKFPTNHRALFKLTSLKEDRFLVFDPITK IYGEWIMFDDHIFPIVGLSKRSDGKAVRFSPIESTIQYQLELSATSEIRETKLVVVLPKKDTYSQELRAETFYSPSVFGL DETGNRTLMFTIPAMKEGESKLLSLYQGNLTRYKIHWKLDPNSLVNRVENESKFPNELRDDWFVKLEDPIVVGKRDELFQ GKTTLLEILSETAKYVSSIPYQSGKFEAAPYVILKNNGGCTEHSYVTMSLLRGMGIPTRLVWNYLPTESSSEMSFNHKYV EVWVDGLGWIPLEPLAPPKSKPGVTHARHLVFAVLPKPTHPKIVGGDRLVQIAKDQIPLGKQLKMKLTILKKETGDRLEE EIGIQPNRIRTRAIQAGEDLVVP
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67063; Mature: 67063
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQWILFFSIFIGSGFLFAKEQGEFPSDWTSVSPTFSYPSVFSFPESESVELFESLLQSR CCCEEEEEEHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC NHLYFQTRTKEKQITIYEYNLETKEIHPKPWDKGKILGWTECNSELLIQTKQKLYALQPK CEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHEEEEHHHHEEECCC SWEIKKEYNLPSPSSSWKDIICSGGNLVRLEKDQLQQVHLESLEERPFLPLPMKSVQRIV CEEEEEECCCCCCCCCCHHHEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KVNETEILLISSFSGNTIQLFSLPDQKTKKEWKFPTNHRALFKLTSLKEDRFLVFDPITK HCCCCEEEEEEECCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCHHH IYGEWIMFDDHIFPIVGLSKRSDGKAVRFSPIESTIQYQLELSATSEIRETKLVVVLPKK HCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEECC DTYSQELRAETFYSPSVFGLDETGNRTLMFTIPAMKEGESKLLSLYQGNLTRYKIHWKLD CCCHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEC PNSLVNRVENESKFPNELRDDWFVKLEDPIVVGKRDELFQGKTTLLEILSETAKYVSSIP HHHHHHHHHCCCCCCHHHCCCEEEEECCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHCC YQSGKFEAAPYVILKNNGGCTEHSYVTMSLLRGMGIPTRLVWNYLPTESSSEMSFNHKYV CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCEEE EVWVDGLGWIPLEPLAPPKSKPGVTHARHLVFAVLPKPTHPKIVGGDRLVQIAKDQIPLG EEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCCEECCCCEEEEHHCCCCCC KQLKMKLTILKKETGDRLEEEIGIQPNRIRTRAIQAGEDLVVP CCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKQWILFFSIFIGSGFLFAKEQGEFPSDWTSVSPTFSYPSVFSFPESESVELFESLLQSR CCCEEEEEEHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCC NHLYFQTRTKEKQITIYEYNLETKEIHPKPWDKGKILGWTECNSELLIQTKQKLYALQPK CEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHEEEEHHHHEEECCC SWEIKKEYNLPSPSSSWKDIICSGGNLVRLEKDQLQQVHLESLEERPFLPLPMKSVQRIV CEEEEEECCCCCCCCCCHHHEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KVNETEILLISSFSGNTIQLFSLPDQKTKKEWKFPTNHRALFKLTSLKEDRFLVFDPITK HCCCCEEEEEEECCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCHHH IYGEWIMFDDHIFPIVGLSKRSDGKAVRFSPIESTIQYQLELSATSEIRETKLVVVLPKK HCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEECC DTYSQELRAETFYSPSVFGLDETGNRTLMFTIPAMKEGESKLLSLYQGNLTRYKIHWKLD CCCHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEC PNSLVNRVENESKFPNELRDDWFVKLEDPIVVGKRDELFQGKTTLLEILSETAKYVSSIP HHHHHHHHHCCCCCCHHHCCCEEEEECCCEEECCCCHHHCCHHHHHHHHHHHHHHHHHCC YQSGKFEAAPYVILKNNGGCTEHSYVTMSLLRGMGIPTRLVWNYLPTESSSEMSFNHKYV CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCEEE EVWVDGLGWIPLEPLAPPKSKPGVTHARHLVFAVLPKPTHPKIVGGDRLVQIAKDQIPLG EEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCCCCEECCCCEEEEHHCCCCCC KQLKMKLTILKKETGDRLEEEIGIQPNRIRTRAIQAGEDLVVP CCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA