| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220814
Identifier: 183220814
GI number: 183220814
Start: 1489342
End: 1489884
Strand: Direct
Name: 183220814
Synonym: LEPBI_I1426
Alternate gene names: NA
Gene position: 1489342-1489884 (Clockwise)
Preceding gene: 183220813
Following gene: 183220816
Centisome position: 41.37
GC content: 41.44
Gene sequence:
>543_bases TTGAGATTTGCAAAAGAGATGGCATTTTATTCTGCCTACCACCAAGAAAAACGAAATGTTTGGATTCATGTATTAGGTGT CCCCACAATAACCTTTACCTTATTTGTCGTACTCAGTCGTTTTTCCCTGTTTGAATGGAATGGATTCAATGCGTCTGCAT CGTTGCTCTTTACTGTCGCCGTGCTCGGTTACTACTATACTTTAGATGTATTTTTTGCCTTTCTTGCCACAATCCTCTTT GGTGGACTTTTTCTGACAGCCGAATGGATCACGACACAACTCCCATCCCAAACAGCATGGACCATCTTCGGAATTGGGCA AGTGATCGGTTGGGGTTCTCAGTTTTATGGACATTTTGTCTTTGAGAAAAGTAGGCCAGCTCTCTTTGACAATTTGTTCC AAGCCCTTGTGTCAGCTCCTCTCTTTGTTGTAGCGGATGTAGTTTTTGAATTGGGTTACCGATTGGATTTAAAAAAAGCC GTGGATGATGAATTAAAACAAAAGGGAGTTTGGAAAGACTTTCGAGTCGAAAAAACGGCGTAA
Upstream 100 bases:
>100_bases TAGAATTTAGAAATTAGAATTTTTTTAAATTTTGACAGATTCGTTCAAGTGGAATCTTCCAAAATTTGGTAGAGTGGTAA CCTACTCTGGAGGTTCCCAC
Downstream 100 bases:
>100_bases GGATTCAATCCATGAATTGGATCAATTCGGTTCTGGGTTTGAATCACAAAAACAAACCTTAGTTAAATGAGACCCTCCCA AAAAAAGTGAGGGTTTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRFAKEMAFYSAYHQEKRNVWIHVLGVPTITFTLFVVLSRFSLFEWNGFNASASLLFTVAVLGYYYTLDVFFAFLATILF GGLFLTAEWITTQLPSQTAWTIFGIGQVIGWGSQFYGHFVFEKSRPALFDNLFQALVSAPLFVVADVVFELGYRLDLKKA VDDELKQKGVWKDFRVEKTA
Sequences:
>Translated_180_residues MRFAKEMAFYSAYHQEKRNVWIHVLGVPTITFTLFVVLSRFSLFEWNGFNASASLLFTVAVLGYYYTLDVFFAFLATILF GGLFLTAEWITTQLPSQTAWTIFGIGQVIGWGSQFYGHFVFEKSRPALFDNLFQALVSAPLFVVADVVFELGYRLDLKKA VDDELKQKGVWKDFRVEKTA >Mature_180_residues MRFAKEMAFYSAYHQEKRNVWIHVLGVPTITFTLFVVLSRFSLFEWNGFNASASLLFTVAVLGYYYTLDVFFAFLATILF GGLFLTAEWITTQLPSQTAWTIFGIGQVIGWGSQFYGHFVFEKSRPALFDNLFQALVSAPLFVVADVVFELGYRLDLKKA VDDELKQKGVWKDFRVEKTA
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321428, Length=178, Percent_Identity=33.7078651685393, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20632; Mature: 20632
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAKEMAFYSAYHQEKRNVWIHVLGVPTITFTLFVVLSRFSLFEWNGFNASASLLFTVA CCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLGYYYTLDVFFAFLATILFGGLFLTAEWITTQLPSQTAWTIFGIGQVIGWGSQFYGHFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHE FEKSRPALFDNLFQALVSAPLFVVADVVFELGYRLDLKKAVDDELKQKGVWKDFRVEKTA EECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRFAKEMAFYSAYHQEKRNVWIHVLGVPTITFTLFVVLSRFSLFEWNGFNASASLLFTVA CCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VLGYYYTLDVFFAFLATILFGGLFLTAEWITTQLPSQTAWTIFGIGQVIGWGSQFYGHFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHE FEKSRPALFDNLFQALVSAPLFVVADVVFELGYRLDLKKAVDDELKQKGVWKDFRVEKTA EECCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA