| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220784
Identifier: 183220784
GI number: 183220784
Start: 1454488
End: 1455588
Strand: Direct
Name: 183220784
Synonym: LEPBI_I1395
Alternate gene names: NA
Gene position: 1454488-1455588 (Clockwise)
Preceding gene: 183220783
Following gene: 183220785
Centisome position: 40.41
GC content: 40.78
Gene sequence:
>1101_bases TTGAATACAAAACGAGTTGGTCAGATCCTAAGAGAAGCAAGAGAAGACAAAAAACTTTCTGTGAAAGATGTCGCAAAAGA AACAAACATAGCGGCAAAATACATCATCGCCTTAGAAACAGAAGATTATTCTCAGTTCCCAGCAGAAACCTTTGCCCTTG GTTTTTTAAAAAACTATGCCAGTTATTTAAAACTCGATACAGCCATGTTGCTCAATTTGTATCGCGGGGAACAAATCGAA GAATCACAAGCACCACTCGAAGAACTCACTCGTCCCACAACCACTCCCTTTAGTTTAGACCGCAATAAAATCATAAGCCT CGTCTCCCTATTTTTATTTGTGATTTCCGCTTACATCATCTACATCAGTTTTGAAGACTCTGGATCCGTTTCTATGGATG AGGACAACACAGAAGTCAGCCAAAATGTGGAACAAACAAACAGTTCTGACATTCCTTCTGGTATCAATTTTGTCTCCCAA AGTGTTCCGGAAAATGCAAGTGTTCCCTTTATCCTCACAGAAGACCGTGGTGTGAGTTTTAGTGTGAACAACCAACAATG TAAAATGTTCATCAAAGGTGTTTCCAATGGAAAGGCCAATCTTGGTTTCAATATCTTCCCTGAAAAAAATGTATATTTTT TCCAAACAGCAGAGGGCGAAGAAACCATCCTTTCTTATAAAATTGAAGAATTGGCATCCCTACGTCGTGATATCCGAGTG GTGACCCAAGCTGTCACAGAGAAATCGGCAAAAGTCCTTGTGACCTTAAAAGAAGAAAGGGAAGGTGTGGCTGTGAAATC TCCTGTAGGAGATGTTCCGATCCAAGTCACATTGTTTTTTTCCAAACCAAGTTATGTTGAATTTGTATTGGATGGCCAAA TGGGTGAGAGAGGTCTCGTTTCTGCAGGTGAAGTGAAACACTTAGAAGCACGTGACCGTCTTGAAATCAAAGTGGGAGAC GGGGGAGCTGTGGAGATGGTCCAAAATGGAAAAGAACGAGTGGTTCTTGGAAAACCAGGAAAACTTGTGAAAAAAATCTT CATCCGCAAACCAAACCCATATGATTCCACACAATCCATCATTGGAGAGTTAGGCGAATAA
Upstream 100 bases:
>100_bases GAAATCCAAGATGGAGTTTTCAATTTTCATATGAGCGGGAACGCGAAAATTGTCAACAACCCACTTGTCTCTGAGAACTA AACTTAAAGAGGAGTTCATT
Downstream 100 bases:
>100_bases TGCCGAAGTCTTTGGAAAACACAAACGAAACACCCAAGTCGTTTTTCATTACAACACTTGGATGCCCAAAAAACACTGTG GATTCAATGGCCATGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MNTKRVGQILREAREDKKLSVKDVAKETNIAAKYIIALETEDYSQFPAETFALGFLKNYASYLKLDTAMLLNLYRGEQIE ESQAPLEELTRPTTTPFSLDRNKIISLVSLFLFVISAYIIYISFEDSGSVSMDEDNTEVSQNVEQTNSSDIPSGINFVSQ SVPENASVPFILTEDRGVSFSVNNQQCKMFIKGVSNGKANLGFNIFPEKNVYFFQTAEGEETILSYKIEELASLRRDIRV VTQAVTEKSAKVLVTLKEEREGVAVKSPVGDVPIQVTLFFSKPSYVEFVLDGQMGERGLVSAGEVKHLEARDRLEIKVGD GGAVEMVQNGKERVVLGKPGKLVKKIFIRKPNPYDSTQSIIGELGE
Sequences:
>Translated_366_residues MNTKRVGQILREAREDKKLSVKDVAKETNIAAKYIIALETEDYSQFPAETFALGFLKNYASYLKLDTAMLLNLYRGEQIE ESQAPLEELTRPTTTPFSLDRNKIISLVSLFLFVISAYIIYISFEDSGSVSMDEDNTEVSQNVEQTNSSDIPSGINFVSQ SVPENASVPFILTEDRGVSFSVNNQQCKMFIKGVSNGKANLGFNIFPEKNVYFFQTAEGEETILSYKIEELASLRRDIRV VTQAVTEKSAKVLVTLKEEREGVAVKSPVGDVPIQVTLFFSKPSYVEFVLDGQMGERGLVSAGEVKHLEARDRLEIKVGD GGAVEMVQNGKERVVLGKPGKLVKKIFIRKPNPYDSTQSIIGELGE >Mature_366_residues MNTKRVGQILREAREDKKLSVKDVAKETNIAAKYIIALETEDYSQFPAETFALGFLKNYASYLKLDTAMLLNLYRGEQIE ESQAPLEELTRPTTTPFSLDRNKIISLVSLFLFVISAYIIYISFEDSGSVSMDEDNTEVSQNVEQTNSSDIPSGINFVSQ SVPENASVPFILTEDRGVSFSVNNQQCKMFIKGVSNGKANLGFNIFPEKNVYFFQTAEGEETILSYKIEELASLRRDIRV VTQAVTEKSAKVLVTLKEEREGVAVKSPVGDVPIQVTLFFSKPSYVEFVLDGQMGERGLVSAGEVKHLEARDRLEIKVGD GGAVEMVQNGKERVVLGKPGKLVKKIFIRKPNPYDSTQSIIGELGE
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40711; Mature: 40711
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRVGQILREAREDKKLSVKDVAKETNIAAKYIIALETEDYSQFPAETFALGFLKNYA CCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEECCCCHHCCHHHHHHHHHHHHH SYLKLDTAMLLNLYRGEQIEESQAPLEELTRPTTTPFSLDRNKIISLVSLFLFVISAYII HHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE YISFEDSGSVSMDEDNTEVSQNVEQTNSSDIPSGINFVSQSVPENASVPFILTEDRGVSF EEEECCCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCEE SVNNQQCKMFIKGVSNGKANLGFNIFPEKNVYFFQTAEGEETILSYKIEELASLRRDIRV EECCHHEEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VTQAVTEKSAKVLVTLKEEREGVAVKSPVGDVPIQVTLFFSKPSYVEFVLDGQMGERGLV HHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCC SAGEVKHLEARDRLEIKVGDGGAVEMVQNGKERVVLGKPGKLVKKIFIRKPNPYDSTQSI CCCCEEECCCCCEEEEEECCCCEEHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHH IGELGE HHHCCC >Mature Secondary Structure MNTKRVGQILREAREDKKLSVKDVAKETNIAAKYIIALETEDYSQFPAETFALGFLKNYA CCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEECCCCHHCCHHHHHHHHHHHHH SYLKLDTAMLLNLYRGEQIEESQAPLEELTRPTTTPFSLDRNKIISLVSLFLFVISAYII HHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE YISFEDSGSVSMDEDNTEVSQNVEQTNSSDIPSGINFVSQSVPENASVPFILTEDRGVSF EEEECCCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCEE SVNNQQCKMFIKGVSNGKANLGFNIFPEKNVYFFQTAEGEETILSYKIEELASLRRDIRV EECCHHEEEEEEECCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH VTQAVTEKSAKVLVTLKEEREGVAVKSPVGDVPIQVTLFFSKPSYVEFVLDGQMGERGLV HHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCC SAGEVKHLEARDRLEIKVGDGGAVEMVQNGKERVVLGKPGKLVKKIFIRKPNPYDSTQSI CCCCEEECCCCCEEEEEECCCCEEHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHH IGELGE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA