| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is lolA
Identifier: 183220783
GI number: 183220783
Start: 1453767
End: 1454468
Strand: Direct
Name: lolA
Synonym: LEPBI_I1394
Alternate gene names: NA
Gene position: 1453767-1454468 (Clockwise)
Preceding gene: 183220782
Following gene: 183220784
Centisome position: 40.39
GC content: 39.74
Gene sequence:
>702_bases ATGAAAGTATGGATCGGATTTTTGTTACTTGTTTTGGGAGTTTCTTTGGAGGCCCAAACAAGTCCGGCTCACAATTGGCA TTCCCCTTCGGAAGTGGTCAAAAAGATCAAAAAAAACTTCAGCGAAATCAATTCGTATTCTGCTGATTTTCTCATCAAAA CGGAAGACAACAAAAAAGAAAAACAAATGCGTGGGAAATGTTTCTACAAACGTCCCGGAAAAATCAGATACAATTTTTCA GAACCAGACGGGGACGAAATTGTATCTGATGGAAAAACACTCCATATCTTTATCAAACGATTGGGTGCTGTTGGCAAACA AGACCTGACCCTTGATCGCAAAAATTCTTCAGGCCCCATCTTTACCACAAACAGTCCCGATGGTTTAAACCGTCTCTTTC GCAAATACCATTATAAATTTGATACCATCGAACAACCACGTTCGATGGGAGACAGTGCCAAATACTTTGTTCTCGATCTG GACCAAAGGGAAAAAATTGGTGGGTTCGAAAAGATGAAACTCTTTGTGGATTCTGAATCTTACTTAATCAAAAAAGCGGT CGCAACAGATGGCCGTGGCAAGGTCACAACGATTTCATTTTCAAACATTAATTTTTCGGAAGAAATCCAAGATGGAGTTT TCAATTTTCATATGAGCGGGAACGCGAAAATTGTCAACAACCCACTTGTCTCTGAGAACTAA
Upstream 100 bases:
>100_bases CGAGGGTATGTATCTCCGCAAATCGGGGCCAAACCTCGAGAAATCTTACGTTCAGCGTAAATCATCGACAAGAGAAGTTT GTCTGAAAAACTGGGAATCT
Downstream 100 bases:
>100_bases ACTTAAAGAGGAGTTCATTTTGAATACAAAACGAGTTGGTCAGATCCTAAGAGAAGCAAGAGAAGACAAAAAACTTTCTG TGAAAGATGTCGCAAAAGAA
Product: outer membrane lipoprotein carrier protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKVWIGFLLLVLGVSLEAQTSPAHNWHSPSEVVKKIKKNFSEINSYSADFLIKTEDNKKEKQMRGKCFYKRPGKIRYNFS EPDGDEIVSDGKTLHIFIKRLGAVGKQDLTLDRKNSSGPIFTTNSPDGLNRLFRKYHYKFDTIEQPRSMGDSAKYFVLDL DQREKIGGFEKMKLFVDSESYLIKKAVATDGRGKVTTISFSNINFSEEIQDGVFNFHMSGNAKIVNNPLVSEN
Sequences:
>Translated_233_residues MKVWIGFLLLVLGVSLEAQTSPAHNWHSPSEVVKKIKKNFSEINSYSADFLIKTEDNKKEKQMRGKCFYKRPGKIRYNFS EPDGDEIVSDGKTLHIFIKRLGAVGKQDLTLDRKNSSGPIFTTNSPDGLNRLFRKYHYKFDTIEQPRSMGDSAKYFVLDL DQREKIGGFEKMKLFVDSESYLIKKAVATDGRGKVTTISFSNINFSEEIQDGVFNFHMSGNAKIVNNPLVSEN >Mature_233_residues MKVWIGFLLLVLGVSLEAQTSPAHNWHSPSEVVKKIKKNFSEINSYSADFLIKTEDNKKEKQMRGKCFYKRPGKIRYNFS EPDGDEIVSDGKTLHIFIKRLGAVGKQDLTLDRKNSSGPIFTTNSPDGLNRLFRKYHYKFDTIEQPRSMGDSAKYFVLDL DQREKIGGFEKMKLFVDSESYLIKKAVATDGRGKVTTISFSNINFSEEIQDGVFNFHMSGNAKIVNNPLVSEN
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26519; Mature: 26519
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVWIGFLLLVLGVSLEAQTSPAHNWHSPSEVVKKIKKNFSEINSYSADFLIKTEDNKKE CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH KQMRGKCFYKRPGKIRYNFSEPDGDEIVSDGKTLHIFIKRLGAVGKQDLTLDRKNSSGPI HHHCCCEEEECCCEEEEECCCCCCHHHHHCCCEEEHHHHHHCCCCCCCCEEECCCCCCCE FTTNSPDGLNRLFRKYHYKFDTIEQPRSMGDSAKYFVLDLDQREKIGGFEKMKLFVDSES EECCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCHHHCCCEEEEEEECCCH YLIKKAVATDGRGKVTTISFSNINFSEEIQDGVFNFHMSGNAKIVNNPLVSEN HHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCEEEEEECCCCEEECCCCCCCC >Mature Secondary Structure MKVWIGFLLLVLGVSLEAQTSPAHNWHSPSEVVKKIKKNFSEINSYSADFLIKTEDNKKE CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH KQMRGKCFYKRPGKIRYNFSEPDGDEIVSDGKTLHIFIKRLGAVGKQDLTLDRKNSSGPI HHHCCCEEEECCCEEEEECCCCCCHHHHHCCCEEEHHHHHHCCCCCCCCEEECCCCCCCE FTTNSPDGLNRLFRKYHYKFDTIEQPRSMGDSAKYFVLDLDQREKIGGFEKMKLFVDSES EECCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEECCCCHHHCCCEEEEEEECCCH YLIKKAVATDGRGKVTTISFSNINFSEEIQDGVFNFHMSGNAKIVNNPLVSEN HHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCEEEEEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA