Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220621
Identifier: 183220621
GI number: 183220621
Start: 1277387
End: 1278706
Strand: Direct
Name: 183220621
Synonym: LEPBI_I1227
Alternate gene names: NA
Gene position: 1277387-1278706 (Clockwise)
Preceding gene: 183220620
Following gene: 183220623
Centisome position: 35.49
GC content: 39.02
Gene sequence:
>1320_bases ATGAATAAAATAATACCTTACCTATGTGTTCTCTTTCTTTTTTTCAGTGGATCTCTCCGTAGTGAAACAATTCTTCTCAA GTCAGGAGAAAAATGGGAAGGTACAGTCCTCACTCAAGATAAGGATATAGTGACGATCAAACTCGCTGACGGTAATACAA AACGGATTCCAAAGTCAGCGATCCGTAAAGTTTCTTTTGCTAAAAAGGCTGAATCCAACCCTGTTAAAGTGGAACCTCAG ATTTCGGAGAAGGAAAAGAAACTCAATGAAGAAAAAGAACTCGCTGAAAAACAAAAAAAGGAAGATGAAAATTTCAAATC CAAAGAAACAAATCAGAAAAAAAGAGAGGATGAACTTTCGAGTGCGAAACGACATTATCTAGAAGGTTCCTTTGGTATTG GAAGTGGTGAGAGCCAATCAGAGCTCCGTCCTTTTTATCAAACCATACAAGTGGCTGGACTTCTTTTTAACAGTGGTGGT CAAGCTGAGATACAATCCACGCCATACAAAACGAAAAATCAAAGTGCAACAACGCGTTTGTTTTACGCTTGGAACCGCCT CACCATTGAGATTCGCGGAACTGAAGCAAAAGGAAATTTTGATGTGAGTGGCATTCAGACACTTACTTATGGGGGAGGTG GCTCGTCATTTGCTACTGACAGTAATACCAATGTTCTTTTTGGAAACGGAGAGTCAAAGTTTCAAAAACTGTCTTCTCGG GTAGGTTTTTCTCCTTACCCACATCCGGTATTTGACCTTCAAATATTGGGAGGGCTAGAAAGAATTTGGTCCAAGAGCAA TCATGAAGTTGATAGTCTCGGAGGGAATACTGCCACTGGTATCAATCCCAACCGAGTGAGTTATCGAGAAACAAACAATT CGTTTAAAGGTTATAGTTTTGGAATCGGATTTGAATGGAAATTTTGGGAACGATTCACTTTACAAGGACAGGTTTTGCAT TTGGATATGAAAGGTCCATCATCCTTTCGAAGTAACGAATTTCGATTGGATAGCTCTCCGTTTCGATACGATCACTATCG TTTAGATTACCAGTGGAAGTCGACTGGAACCGAAGTGAATGTAAAATTCACAACAAGGGTCCATGGTGACTTTAGTTTAT TTATGGAAGCAAGCAATATGACCCTGAATAACAAATTACAGTCTGGTTATATCACAGAAAGCGATAGTGGTGGGGATAGT GATCCAGCACAAATATTACTAAGAGTCTATGGACCACAGAAATTAATTCCAATGTTATATGATTCAAAGACAATATTGTC TTACGTTCAAGTCGGTGCAAACTATCGTTTTCATTTTTGA
Upstream 100 bases:
>100_bases CATATTTTCTTTCGAATTGTATTTTTATCTGCTTAATCAGTTTGCAGTAGAATGCCATCCTGATAGGATACTCAAATTGC AGTGGTGAACAATTGAATTT
Downstream 100 bases:
>100_bases ACAGGATTAAAAATGATGGTCCAACCATTCCTAGGAAAGGGAGGAGTTTTCTTTTTTGGATTTCCAAAGTTCAGTGGATC TTAAAATTTCTTCTGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MNKIIPYLCVLFLFFSGSLRSETILLKSGEKWEGTVLTQDKDIVTIKLADGNTKRIPKSAIRKVSFAKKAESNPVKVEPQ ISEKEKKLNEEKELAEKQKKEDENFKSKETNQKKREDELSSAKRHYLEGSFGIGSGESQSELRPFYQTIQVAGLLFNSGG QAEIQSTPYKTKNQSATTRLFYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGSSFATDSNTNVLFGNGESKFQKLSSR VGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYRETNNSFKGYSFGIGFEWKFWERFTLQGQVLH LDMKGPSSFRSNEFRLDSSPFRYDHYRLDYQWKSTGTEVNVKFTTRVHGDFSLFMEASNMTLNNKLQSGYITESDSGGDS DPAQILLRVYGPQKLIPMLYDSKTILSYVQVGANYRFHF
Sequences:
>Translated_439_residues MNKIIPYLCVLFLFFSGSLRSETILLKSGEKWEGTVLTQDKDIVTIKLADGNTKRIPKSAIRKVSFAKKAESNPVKVEPQ ISEKEKKLNEEKELAEKQKKEDENFKSKETNQKKREDELSSAKRHYLEGSFGIGSGESQSELRPFYQTIQVAGLLFNSGG QAEIQSTPYKTKNQSATTRLFYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGSSFATDSNTNVLFGNGESKFQKLSSR VGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYRETNNSFKGYSFGIGFEWKFWERFTLQGQVLH LDMKGPSSFRSNEFRLDSSPFRYDHYRLDYQWKSTGTEVNVKFTTRVHGDFSLFMEASNMTLNNKLQSGYITESDSGGDS DPAQILLRVYGPQKLIPMLYDSKTILSYVQVGANYRFHF >Mature_439_residues MNKIIPYLCVLFLFFSGSLRSETILLKSGEKWEGTVLTQDKDIVTIKLADGNTKRIPKSAIRKVSFAKKAESNPVKVEPQ ISEKEKKLNEEKELAEKQKKEDENFKSKETNQKKREDELSSAKRHYLEGSFGIGSGESQSELRPFYQTIQVAGLLFNSGG QAEIQSTPYKTKNQSATTRLFYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGSSFATDSNTNVLFGNGESKFQKLSSR VGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYRETNNSFKGYSFGIGFEWKFWERFTLQGQVLH LDMKGPSSFRSNEFRLDSSPFRYDHYRLDYQWKSTGTEVNVKFTTRVHGDFSLFMEASNMTLNNKLQSGYITESDSGGDS DPAQILLRVYGPQKLIPMLYDSKTILSYVQVGANYRFHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49648; Mature: 49648
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIIPYLCVLFLFFSGSLRSETILLKSGEKWEGTVLTQDKDIVTIKLADGNTKRIPKSA CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCHHH IRKVSFAKKAESNPVKVEPQISEKEKKLNEEKELAEKQKKEDENFKSKETNQKKREDELS HHHHHHHHHCCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SAKRHYLEGSFGIGSGESQSELRPFYQTIQVAGLLFNSGGQAEIQSTPYKTKNQSATTRL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCEEEE FYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGSSFATDSNTNVLFGNGESKFQKLSSR EEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHH VGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYRETNNSFKGYSF CCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE GIGFEWKFWERFTLQGQVLHLDMKGPSSFRSNEFRLDSSPFRYDHYRLDYQWKSTGTEVN ECCCEEEHEEEEEECCEEEEEEECCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCEEE VKFTTRVHGDFSLFMEASNMTLNNKLQSGYITESDSGGDSDPAQILLRVYGPQKLIPMLY EEEEEEECCCEEEEEEECCCEECCCCCCCEEECCCCCCCCCHHHEEEEECCCCHHHHHHC DSKTILSYVQVGANYRFHF CCHHHHHHHHHCCCEEECC >Mature Secondary Structure MNKIIPYLCVLFLFFSGSLRSETILLKSGEKWEGTVLTQDKDIVTIKLADGNTKRIPKSA CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCHHH IRKVSFAKKAESNPVKVEPQISEKEKKLNEEKELAEKQKKEDENFKSKETNQKKREDELS HHHHHHHHHCCCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SAKRHYLEGSFGIGSGESQSELRPFYQTIQVAGLLFNSGGQAEIQSTPYKTKNQSATTRL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCCCCCCEEEE FYAWNRLTIEIRGTEAKGNFDVSGIQTLTYGGGGSSFATDSNTNVLFGNGESKFQKLSSR EEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHH VGFSPYPHPVFDLQILGGLERIWSKSNHEVDSLGGNTATGINPNRVSYRETNNSFKGYSF CCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE GIGFEWKFWERFTLQGQVLHLDMKGPSSFRSNEFRLDSSPFRYDHYRLDYQWKSTGTEVN ECCCEEEHEEEEEECCEEEEEEECCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCEEE VKFTTRVHGDFSLFMEASNMTLNNKLQSGYITESDSGGDSDPAQILLRVYGPQKLIPMLY EEEEEEECCCEEEEEEECCCEECCCCCCCEEECCCCCCCCCHHHEEEEECCCCHHHHHHC DSKTILSYVQVGANYRFHF CCHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA