Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is nhaA2 [H]
Identifier: 183220540
GI number: 183220540
Start: 1191250
End: 1192299
Strand: Direct
Name: nhaA2 [H]
Synonym: LEPBI_I1143
Alternate gene names: 183220540
Gene position: 1191250-1192299 (Clockwise)
Preceding gene: 183220537
Following gene: 183220541
Centisome position: 33.09
GC content: 37.71
Gene sequence:
>1050_bases ATGGAAAATAATTTTAAATCGTGGATGGCCCAGCCCATCTCTAAAATCTTCATAGGCACCAATTTGGTCTTCGCTCTGCT TTTTTTTGTCAGTGTTCCTTCCTTTGTGAAAGAATACATCACCCAGGATGCCGTAAGCATCGGAGGTAAAAAATATGACC TCAGTGATGTGAAGAACTCCTCTCCGATTGCCTATTCTAAATTCCAATCTGAGTACAAATCCCTTCTCAAAAATACATTT GGTGAATTTGCCCAAGACAAATTATTCGAACTTGTTGCCAAAGACAGAAATATCAAACCTTCAGAAGTATTGAACGAAGG ATTGATTTTAAGAGAACCTTCGGAAGAAGATATTATCAATGTTTATATGTCAAACAAAGCTCAGTTAGGTGGGAAGTCTC TCGCTGAAACAAGAGAAAAAATTGTGGGATTTTTAAAAAACCAACAGGAACAAGAACATAGCCGAAACAAATACCGTGAA ATCATCACCAAATACCCTGTTGATTTTTTGATCAAAGAACCAGAAGCGATTCGAGTCACTGTTGATGAAAAAAATAACCC AAGCATTGGACCAAAAGATGCCAAAGTCACTGTGATTGAATTTTCTGATTTCGAGTGCCCTTTCTGCAAACGAAGCCAAG ATGTAAATAACCAACTCCGAGAAAAATACAAAGGCCAAATCCGTTGGGTTTTCCGTGACTTTCCACTACCTTTCCACCAA GATGCGATGTATGCACATATGGCTGCCAATTGTTCTATTGAAGAAGGTAAGTATTGGGATGTGTTCAATGTTTTATTTGA GAACAGTGGAAACCTAAGTAAATCCAAAGTGGATGAATTTGTTCTCAAAACAGGACTTTCTAAAGAGAAATACCAATCTT GTATGAAAGACCAATCGAAATTAAAGAGCGAAATCGAAGCCGATATCCAAGATGGTCAAAAGGTCGGAGTGAGTGGTACA CCTGCATTTTTTATCAATGGGATCTTTGTATCAGGTGCCTTACCATTTGAAAACTTCGATGAGATCATCCAAAAAGAACT GAAACAATAA
Upstream 100 bases:
>100_bases AGATTTTCGGTCTTTTGATCCTTAGCTTTAGCGAAAATAGAAGATTTTTTTAGGATTTTTCGGTTTGATTGCCCGCTTTA TGGGCGGGAAGCTGGCAGAG
Downstream 100 bases:
>100_bases AGGATTATAAACCAAAAAGGAAAAATTATATGAGCAAAAAAGTGAAAGTTGCTGTAACAGGTGCAGCCGGACAAATCGGA TATGCACTTTTATTTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MENNFKSWMAQPISKIFIGTNLVFALLFFVSVPSFVKEYITQDAVSIGGKKYDLSDVKNSSPIAYSKFQSEYKSLLKNTF GEFAQDKLFELVAKDRNIKPSEVLNEGLILREPSEEDIINVYMSNKAQLGGKSLAETREKIVGFLKNQQEQEHSRNKYRE IITKYPVDFLIKEPEAIRVTVDEKNNPSIGPKDAKVTVIEFSDFECPFCKRSQDVNNQLREKYKGQIRWVFRDFPLPFHQ DAMYAHMAANCSIEEGKYWDVFNVLFENSGNLSKSKVDEFVLKTGLSKEKYQSCMKDQSKLKSEIEADIQDGQKVGVSGT PAFFINGIFVSGALPFENFDEIIQKELKQ
Sequences:
>Translated_349_residues MENNFKSWMAQPISKIFIGTNLVFALLFFVSVPSFVKEYITQDAVSIGGKKYDLSDVKNSSPIAYSKFQSEYKSLLKNTF GEFAQDKLFELVAKDRNIKPSEVLNEGLILREPSEEDIINVYMSNKAQLGGKSLAETREKIVGFLKNQQEQEHSRNKYRE IITKYPVDFLIKEPEAIRVTVDEKNNPSIGPKDAKVTVIEFSDFECPFCKRSQDVNNQLREKYKGQIRWVFRDFPLPFHQ DAMYAHMAANCSIEEGKYWDVFNVLFENSGNLSKSKVDEFVLKTGLSKEKYQSCMKDQSKLKSEIEADIQDGQKVGVSGT PAFFINGIFVSGALPFENFDEIIQKELKQ >Mature_349_residues MENNFKSWMAQPISKIFIGTNLVFALLFFVSVPSFVKEYITQDAVSIGGKKYDLSDVKNSSPIAYSKFQSEYKSLLKNTF GEFAQDKLFELVAKDRNIKPSEVLNEGLILREPSEEDIINVYMSNKAQLGGKSLAETREKIVGFLKNQQEQEHSRNKYRE IITKYPVDFLIKEPEAIRVTVDEKNNPSIGPKDAKVTVIEFSDFECPFCKRSQDVNNQLREKYKGQIRWVFRDFPLPFHQ DAMYAHMAANCSIEEGKYWDVFNVLFENSGNLSKSKVDEFVLKTGLSKEKYQSCMKDQSKLKSEIEADIQDGQKVGVSGT PAFFINGIFVSGALPFENFDEIIQKELKQ
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 39960; Mature: 39960
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNFKSWMAQPISKIFIGTNLVFALLFFVSVPSFVKEYITQDAVSIGGKKYDLSDVKNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCC SPIAYSKFQSEYKSLLKNTFGEFAQDKLFELVAKDRNIKPSEVLNEGLILREPSEEDIIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCEEE VYMSNKAQLGGKSLAETREKIVGFLKNQQEQEHSRNKYREIITKYPVDFLIKEPEAIRVT EEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEE VDEKNNPSIGPKDAKVTVIEFSDFECPFCKRSQDVNNQLREKYKGQIRWVFRDFPLPFHQ EECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC DAMYAHMAANCSIEEGKYWDVFNVLFENSGNLSKSKVDEFVLKTGLSKEKYQSCMKDQSK HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LKSEIEADIQDGQKVGVSGTPAFFINGIFVSGALPFENFDEIIQKELKQ HHHHHHHHHHCCCEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MENNFKSWMAQPISKIFIGTNLVFALLFFVSVPSFVKEYITQDAVSIGGKKYDLSDVKNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCC SPIAYSKFQSEYKSLLKNTFGEFAQDKLFELVAKDRNIKPSEVLNEGLILREPSEEDIIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCEEE VYMSNKAQLGGKSLAETREKIVGFLKNQQEQEHSRNKYREIITKYPVDFLIKEPEAIRVT EEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEE VDEKNNPSIGPKDAKVTVIEFSDFECPFCKRSQDVNNQLREKYKGQIRWVFRDFPLPFHQ EECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC DAMYAHMAANCSIEEGKYWDVFNVLFENSGNLSKSKVDEFVLKTGLSKEKYQSCMKDQSK HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LKSEIEADIQDGQKVGVSGTPAFFINGIFVSGALPFENFDEIIQKELKQ HHHHHHHHHHCCCEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA