Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220454
Identifier: 183220454
GI number: 183220454
Start: 1092773
End: 1093546
Strand: Direct
Name: 183220454
Synonym: LEPBI_I1051
Alternate gene names: NA
Gene position: 1092773-1093546 (Clockwise)
Preceding gene: 183220453
Following gene: 183220462
Centisome position: 30.36
GC content: 35.4
Gene sequence:
>774_bases ATGATGGAAAAACTTCGGGTAGGAGTCTTTTTATTCTTTTTACTCATCCTTGCGGTGTTAACGTTTAGTTTGTCTAAAAG TTGGCGCCTATACGATGGAGGGTATGAAGTGACTGTGGAAACGCCAGAGTCCAAAGAAAAAGACACCTCTCCCGAACCAA CTGACAGTTTAGATTTAGAAGATGGGAATGGTAAAATTTATTGGAAACAATACTTTATCTACCCTCATGGACTCGTTACG GAATCAGGAGGATTTGGTCCAGATGGGATCTTATCCCATGCGCGTAATTTGTATTCCATCAATTTAAAAGATGGAAAAAT CCAAAAACTCTTTGTGCACGATGTTTATATTTGGGATTTTTTTGTTGGAGAATTTTCTAAAAAATCAGTTTTGAATACGA TTGATGATCCAAAAGAAGATGTATTACAAATTGAAAAGAAAATATTGATTTTTGCTGTGACTGAGGATAGTAACCTCGAT GGAGTTTTAAACTATAAAGACCACAAATTGGTTTTTCTTTTTGATCCTGAAACAAATCAATTGTCTTCCATCTTGCCAAC CGGATTTCACTTTCGAAAACTTCTCTACAATTCTTTGAAAAACCACCTAACTTTGATTTTGGGGAAAAATCCTGATCCTT TACCTAAACTGAATCGAAAAAAACCACCAGAAACAATCACTAAACTTCATTTATATGATTATGACGTGGTATCATCCAAA GGAGTTTTGAGTGGGAATTTGGAATCTTTGGTTTCTACCGAAGAGAAAGAGTGA
Upstream 100 bases:
>100_bases GCATTTCCAAGTCAGTTCTCAACTTCCCACTCTTTGCTTATATGACAAACTCCGAAATGGACGAAGTGTTGAGTGCGATA AAAGCGTATAACGCTAGTAA
Downstream 100 bases:
>100_bases ATCTTCACTCCCCCCAAACTTGTACGCAGTCTTCGTTAAAAATTCCAAATAAAGTTTTATTGGCAAATTCGACAGCAGAG ATTTTCTGAATCCCTGCTTT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MMEKLRVGVFLFFLLILAVLTFSLSKSWRLYDGGYEVTVETPESKEKDTSPEPTDSLDLEDGNGKIYWKQYFIYPHGLVT ESGGFGPDGILSHARNLYSINLKDGKIQKLFVHDVYIWDFFVGEFSKKSVLNTIDDPKEDVLQIEKKILIFAVTEDSNLD GVLNYKDHKLVFLFDPETNQLSSILPTGFHFRKLLYNSLKNHLTLILGKNPDPLPKLNRKKPPETITKLHLYDYDVVSSK GVLSGNLESLVSTEEKE
Sequences:
>Translated_257_residues MMEKLRVGVFLFFLLILAVLTFSLSKSWRLYDGGYEVTVETPESKEKDTSPEPTDSLDLEDGNGKIYWKQYFIYPHGLVT ESGGFGPDGILSHARNLYSINLKDGKIQKLFVHDVYIWDFFVGEFSKKSVLNTIDDPKEDVLQIEKKILIFAVTEDSNLD GVLNYKDHKLVFLFDPETNQLSSILPTGFHFRKLLYNSLKNHLTLILGKNPDPLPKLNRKKPPETITKLHLYDYDVVSSK GVLSGNLESLVSTEEKE >Mature_257_residues MMEKLRVGVFLFFLLILAVLTFSLSKSWRLYDGGYEVTVETPESKEKDTSPEPTDSLDLEDGNGKIYWKQYFIYPHGLVT ESGGFGPDGILSHARNLYSINLKDGKIQKLFVHDVYIWDFFVGEFSKKSVLNTIDDPKEDVLQIEKKILIFAVTEDSNLD GVLNYKDHKLVFLFDPETNQLSSILPTGFHFRKLLYNSLKNHLTLILGKNPDPLPKLNRKKPPETITKLHLYDYDVVSSK GVLSGNLESLVSTEEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29338; Mature: 29338
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEKLRVGVFLFFLLILAVLTFSLSKSWRLYDGGYEVTVETPESKEKDTSPEPTDSLDLE CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEE DGNGKIYWKQYFIYPHGLVTESGGFGPDGILSHARNLYSINLKDGKIQKLFVHDVYIWDF CCCCEEEEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEEHH FVGEFSKKSVLNTIDDPKEDVLQIEKKILIFAVTEDSNLDGVLNYKDHKLVFLFDPETNQ HHHCCCHHHHHHHCCCCHHHHHHHCCEEEEEEEECCCCCCEEEECCCCEEEEEECCCCHH LSSILPTGFHFRKLLYNSLKNHLTLILGKNPDPLPKLNRKKPPETITKLHLYDYDVVSSK HHHHCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEEECCCC GVLSGNLESLVSTEEKE CCCCCCHHHHHCCCCCC >Mature Secondary Structure MMEKLRVGVFLFFLLILAVLTFSLSKSWRLYDGGYEVTVETPESKEKDTSPEPTDSLDLE CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEE DGNGKIYWKQYFIYPHGLVTESGGFGPDGILSHARNLYSINLKDGKIQKLFVHDVYIWDF CCCCEEEEEEEEEECCCEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEEEEEEHH FVGEFSKKSVLNTIDDPKEDVLQIEKKILIFAVTEDSNLDGVLNYKDHKLVFLFDPETNQ HHHCCCHHHHHHHCCCCHHHHHHHCCEEEEEEEECCCCCCEEEECCCCEEEEEECCCCHH LSSILPTGFHFRKLLYNSLKNHLTLILGKNPDPLPKLNRKKPPETITKLHLYDYDVVSSK HHHHCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHEEEEEEEEECCCC GVLSGNLESLVSTEEKE CCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA