Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220449
Identifier: 183220449
GI number: 183220449
Start: 1088993
End: 1089766
Strand: Direct
Name: 183220449
Synonym: LEPBI_I1046
Alternate gene names: NA
Gene position: 1088993-1089766 (Clockwise)
Preceding gene: 183220448
Following gene: 183220450
Centisome position: 30.25
GC content: 40.57
Gene sequence:
>774_bases ATGCCTCTTTCACAAGAACAAATCATGGAACTCTCCAAATTGCAGAAAATGCTAAGGAATTTGGAGAAAATCGAAAGAAA TGCAAAAAATGACTTACAAAAAGAAAGGGTTGCGTTTGACATTGAACGTTATAGGCGTAGGATGCAAGAAGTGTCCCCCG ATGGAATTCCAGACAACTTGGAACAAACCATGCGAAACGCCAAAACAAGGGAAGAAAACCCAGAAAGCCTCAAACATAAA ATCATATCTCAATACCCGGTGATGAAAATTTCACCTAACTCCAATGACAGTGAGATCAACCAAATTGGAACCCTTGTTAA TATTATGGATTTGGAATACATCCCTATCCTTGGTGATGCTCATATCAAATTTGATTATTCCCATGCCACAGAACGTGACT CCGTTCTTAAATACATGGAGAACCTACGTCGTAATATGAAAATCCTTGTGGAAACCATTGAAGAGTATGCAGCTGCCGAT AAACAAGAGTTTCGTGAACAGCTCTCCCGTATGAAAAACAAACAATCTCGGATTTTCATTGCGGAAGCCTTTGAAACTTT GGGTAAGTTCCGCGACTTCCTACTTGCTGTGAATGGTGACATCAAAGAAGGAAATAATGTCATCATGAACATGGAAGAAC CGATCAAATTCAACCCTCGTTTTGAAAAAGCGACAGTTTTGGAAGGTCGTTCCATCATGGAAGCTCTCCGCGAATTTGAA GAATTTGCCGATGAGGCATGTGATTTGATTCGCCTCCCGTCTTTTCGAGGGTAA
Upstream 100 bases:
>100_bases GTATTACAAATCAAAGGTGATACAAAAATGAGTTCTGCCATCAAACGTTCGTTAGAAATCGGAAATCAATCCATCACATT ACCTGAAGGTTGGGAATAAG
Downstream 100 bases:
>100_bases AAAAACCTTTTCATTCCTAGGGGGAACGAGGACACTGTGAAAAATCACATACACGGACTCGCAAACGCATGGCATTAGTC AAAAATCAGACCGAAGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPLSQEQIMELSKLQKMLRNLEKIERNAKNDLQKERVAFDIERYRRRMQEVSPDGIPDNLEQTMRNAKTREENPESLKHK IISQYPVMKISPNSNDSEINQIGTLVNIMDLEYIPILGDAHIKFDYSHATERDSVLKYMENLRRNMKILVETIEEYAAAD KQEFREQLSRMKNKQSRIFIAEAFETLGKFRDFLLAVNGDIKEGNNVIMNMEEPIKFNPRFEKATVLEGRSIMEALREFE EFADEACDLIRLPSFRG
Sequences:
>Translated_257_residues MPLSQEQIMELSKLQKMLRNLEKIERNAKNDLQKERVAFDIERYRRRMQEVSPDGIPDNLEQTMRNAKTREENPESLKHK IISQYPVMKISPNSNDSEINQIGTLVNIMDLEYIPILGDAHIKFDYSHATERDSVLKYMENLRRNMKILVETIEEYAAAD KQEFREQLSRMKNKQSRIFIAEAFETLGKFRDFLLAVNGDIKEGNNVIMNMEEPIKFNPRFEKATVLEGRSIMEALREFE EFADEACDLIRLPSFRG >Mature_256_residues PLSQEQIMELSKLQKMLRNLEKIERNAKNDLQKERVAFDIERYRRRMQEVSPDGIPDNLEQTMRNAKTREENPESLKHKI ISQYPVMKISPNSNDSEINQIGTLVNIMDLEYIPILGDAHIKFDYSHATERDSVLKYMENLRRNMKILVETIEEYAAADK QEFREQLSRMKNKQSRIFIAEAFETLGKFRDFLLAVNGDIKEGNNVIMNMEEPIKFNPRFEKATVLEGRSIMEALREFEE FADEACDLIRLPSFRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30197; Mature: 30066
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSQEQIMELSKLQKMLRNLEKIERNAKNDLQKERVAFDIERYRRRMQEVSPDGIPDNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH EQTMRNAKTREENPESLKHKIISQYPVMKISPNSNDSEINQIGTLVNIMDLEYIPILGDA HHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCEECEECCC HIKFDYSHATERDSVLKYMENLRRNMKILVETIEEYAAADKQEFREQLSRMKNKQSRIFI EEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AEAFETLGKFRDFLLAVNGDIKEGNNVIMNMEEPIKFNPRFEKATVLEGRSIMEALREFE HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHH EFADEACDLIRLPSFRG HHHHHHHHHHCCCCCCC >Mature Secondary Structure PLSQEQIMELSKLQKMLRNLEKIERNAKNDLQKERVAFDIERYRRRMQEVSPDGIPDNL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH EQTMRNAKTREENPESLKHKIISQYPVMKISPNSNDSEINQIGTLVNIMDLEYIPILGDA HHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCEECEECCC HIKFDYSHATERDSVLKYMENLRRNMKILVETIEEYAAADKQEFREQLSRMKNKQSRIFI EEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AEAFETLGKFRDFLLAVNGDIKEGNNVIMNMEEPIKFNPRFEKATVLEGRSIMEALREFE HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHH EFADEACDLIRLPSFRG HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA