Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183220448

Identifier: 183220448

GI number: 183220448

Start: 1087792

End: 1088991

Strand: Direct

Name: 183220448

Synonym: LEPBI_I1045

Alternate gene names: NA

Gene position: 1087792-1088991 (Clockwise)

Preceding gene: 183220440

Following gene: 183220449

Centisome position: 30.22

GC content: 39.83

Gene sequence:

>1200_bases
ATGAGCTCACAAACAGAATACAAACTGCGCTGGCCAGAATATAGAATCGAATTCCACCCTACGGAAGAAAACCCTAAAAA
AGTCACACTTCCTGAGTTATGGCCAGATCTTCGTGCCTTTTTTTCAGGCAACCAGTCTCGATTTGCAAACTATCTCTTTT
ACCTATCGACCGATTTCTCTGGGGGGTTCAGCCTTTGTTCTGTTCTCGGGCAAAATGATGCCAGCTTTCGCTTCCATGAC
CCTGTTTTGCAATCTCCTTCCACATTTCCCAAGGAGAGTTTAGAAACCATCTGGAAACTTTGCCAAAATCGCGAATTCGA
CGAGATGGAGAGGGAAGATTGGGAACTCATCGGTTTTGGATTTTTATATGTAGGGAATATTTCCGAATTTCGGAAATGGG
TTCTTGTGACAAAAGACTATTTTGGGCAAACAGCTGACAACCATCGTTTTTTAACCCTCCTTGGTTGGGAATATTCTGAA
ATTCCGTTTGAAAACTCCATATTGCACATGTTAGTTGAGTATGCAAAAGGGGATTTTGGGAAAATAGATTTTAAGGCCTT
AGTGGATTCCTGTTTACTCGATTCTCACTGGCAAATTGCGGGTGTTTTGTTTCACGCCATTGAACTTGGATTGTTGCCCG
AAAACGAATCCTTTCGTGTTTGGAAATTTTTAATTGGGTTTTATGAAGAATGGGAATCTTGGGAAAAAGAAAAATTCCAA
TATGTTTCGTTTGGAAAAATTCCACCATTTTATGCCCTTCGGTATGCAAAACGATACCTCCCACACGAATCATTTTACAA
ATACCAGTCGGATTTGGAAACAGAGCTCCGAGGGGACTGGGTCAGTGGAAGTGAATTTGGTTATGAACTCACACATTCGA
TCAATCCTTGTATCGATACAGTGGTTCGATTTCGTAATGAAGGGGAACGATTTGAAAGGGAATTGGATGCATTGTATCAA
TTAAAACCGTATTCGTATCTTCTCCCGTTACAACTTGCTTGTATTCAATTCGTAAAAAAAGAATATGATGGTTTTTTGAA
ATTATACCAAAAGTCAGGTAGACTCAAACACCTCCCTCTCGCTCTCAATTTGTATTGGAGAGTATTACAAATCAAAGGTG
ATACAAAAATGAGTTCTGCCATCAAACGTTCGTTAGAAATCGGAAATCAATCCATCACATTACCTGAAGGTTGGGAATAA

Upstream 100 bases:

>100_bases
GGGATGTTGTGAAAAAGAGAAGAATTCTACTTGCTAACCAAAAATGCCTCATGCATACTTCCTATGATTACGAATTTAGA
GAGGGAAGGTCCCCCTCCTT

Downstream 100 bases:

>100_bases
GATGCCTCTTTCACAAGAACAAATCATGGAACTCTCCAAATTGCAGAAAATGCTAAGGAATTTGGAGAAAATCGAAAGAA
ATGCAAAAAATGACTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHD
PVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSE
IPFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ
YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQ
LKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE

Sequences:

>Translated_399_residues
MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHD
PVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSE
IPFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ
YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQ
LKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE
>Mature_398_residues
SSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHDP
VLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEI
PFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQY
VSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQL
KPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47249; Mature: 47118

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFS
CCCCCCEEEECCEEEEEEECCCCCCCEEECHHHHHHHHHHHCCCHHHHEEEEEEEECCCC
GGFSLCSVLGQNDASFRFHDPVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFG
CHHHHHHHHCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEE
FLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEIPFENSILHMLVEYAKGDFG
EEEECCHHHHHHEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
KIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE
YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDT
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHH
VVRFRNEGERFERELDALYQLKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPL
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCE
ALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE
EHEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure 
SSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFS
CCCCCEEEECCEEEEEEECCCCCCCEEECHHHHHHHHHHHCCCHHHHEEEEEEEECCCC
GGFSLCSVLGQNDASFRFHDPVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFG
CHHHHHHHHCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEE
FLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEIPFENSILHMLVEYAKGDFG
EEEECCHHHHHHEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
KIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE
YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDT
EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHH
VVRFRNEGERFERELDALYQLKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPL
HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCE
ALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE
EHEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA