Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220448
Identifier: 183220448
GI number: 183220448
Start: 1087792
End: 1088991
Strand: Direct
Name: 183220448
Synonym: LEPBI_I1045
Alternate gene names: NA
Gene position: 1087792-1088991 (Clockwise)
Preceding gene: 183220440
Following gene: 183220449
Centisome position: 30.22
GC content: 39.83
Gene sequence:
>1200_bases ATGAGCTCACAAACAGAATACAAACTGCGCTGGCCAGAATATAGAATCGAATTCCACCCTACGGAAGAAAACCCTAAAAA AGTCACACTTCCTGAGTTATGGCCAGATCTTCGTGCCTTTTTTTCAGGCAACCAGTCTCGATTTGCAAACTATCTCTTTT ACCTATCGACCGATTTCTCTGGGGGGTTCAGCCTTTGTTCTGTTCTCGGGCAAAATGATGCCAGCTTTCGCTTCCATGAC CCTGTTTTGCAATCTCCTTCCACATTTCCCAAGGAGAGTTTAGAAACCATCTGGAAACTTTGCCAAAATCGCGAATTCGA CGAGATGGAGAGGGAAGATTGGGAACTCATCGGTTTTGGATTTTTATATGTAGGGAATATTTCCGAATTTCGGAAATGGG TTCTTGTGACAAAAGACTATTTTGGGCAAACAGCTGACAACCATCGTTTTTTAACCCTCCTTGGTTGGGAATATTCTGAA ATTCCGTTTGAAAACTCCATATTGCACATGTTAGTTGAGTATGCAAAAGGGGATTTTGGGAAAATAGATTTTAAGGCCTT AGTGGATTCCTGTTTACTCGATTCTCACTGGCAAATTGCGGGTGTTTTGTTTCACGCCATTGAACTTGGATTGTTGCCCG AAAACGAATCCTTTCGTGTTTGGAAATTTTTAATTGGGTTTTATGAAGAATGGGAATCTTGGGAAAAAGAAAAATTCCAA TATGTTTCGTTTGGAAAAATTCCACCATTTTATGCCCTTCGGTATGCAAAACGATACCTCCCACACGAATCATTTTACAA ATACCAGTCGGATTTGGAAACAGAGCTCCGAGGGGACTGGGTCAGTGGAAGTGAATTTGGTTATGAACTCACACATTCGA TCAATCCTTGTATCGATACAGTGGTTCGATTTCGTAATGAAGGGGAACGATTTGAAAGGGAATTGGATGCATTGTATCAA TTAAAACCGTATTCGTATCTTCTCCCGTTACAACTTGCTTGTATTCAATTCGTAAAAAAAGAATATGATGGTTTTTTGAA ATTATACCAAAAGTCAGGTAGACTCAAACACCTCCCTCTCGCTCTCAATTTGTATTGGAGAGTATTACAAATCAAAGGTG ATACAAAAATGAGTTCTGCCATCAAACGTTCGTTAGAAATCGGAAATCAATCCATCACATTACCTGAAGGTTGGGAATAA
Upstream 100 bases:
>100_bases GGGATGTTGTGAAAAAGAGAAGAATTCTACTTGCTAACCAAAAATGCCTCATGCATACTTCCTATGATTACGAATTTAGA GAGGGAAGGTCCCCCTCCTT
Downstream 100 bases:
>100_bases GATGCCTCTTTCACAAGAACAAATCATGGAACTCTCCAAATTGCAGAAAATGCTAAGGAATTTGGAGAAAATCGAAAGAA ATGCAAAAAATGACTTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHD PVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSE IPFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQ LKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE
Sequences:
>Translated_399_residues MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHD PVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSE IPFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQ LKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE >Mature_398_residues SSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFSGGFSLCSVLGQNDASFRFHDP VLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFGFLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEI PFENSILHMLVEYAKGDFGKIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQY VSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDTVVRFRNEGERFERELDALYQL KPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPLALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47249; Mature: 47118
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFS CCCCCCEEEECCEEEEEEECCCCCCCEEECHHHHHHHHHHHCCCHHHHEEEEEEEECCCC GGFSLCSVLGQNDASFRFHDPVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFG CHHHHHHHHCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEE FLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEIPFENSILHMLVEYAKGDFG EEEECCHHHHHHEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC KIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDT EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHH VVRFRNEGERFERELDALYQLKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPL HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCE ALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE EHEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure SSQTEYKLRWPEYRIEFHPTEENPKKVTLPELWPDLRAFFSGNQSRFANYLFYLSTDFS CCCCCEEEECCEEEEEEECCCCCCCEEECHHHHHHHHHHHCCCHHHHEEEEEEEECCCC GGFSLCSVLGQNDASFRFHDPVLQSPSTFPKESLETIWKLCQNREFDEMEREDWELIGFG CHHHHHHHHCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEE FLYVGNISEFRKWVLVTKDYFGQTADNHRFLTLLGWEYSEIPFENSILHMLVEYAKGDFG EEEECCHHHHHHEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC KIDFKALVDSCLLDSHWQIAGVLFHAIELGLLPENESFRVWKFLIGFYEEWESWEKEKFQ CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE YVSFGKIPPFYALRYAKRYLPHESFYKYQSDLETELRGDWVSGSEFGYELTHSINPCIDT EEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHH VVRFRNEGERFERELDALYQLKPYSYLLPLQLACIQFVKKEYDGFLKLYQKSGRLKHLPL HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCE ALNLYWRVLQIKGDTKMSSAIKRSLEIGNQSITLPEGWE EHEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA