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The map label for this gene is yciA [C]

Identifier: 183220428

GI number: 183220428

Start: 1067823

End: 1068203

Strand: Reverse

Name: yciA [C]

Synonym: LEPBI_I1025

Alternate gene names: 183220428

Gene position: 1068203-1067823 (Counterclockwise)

Preceding gene: 183220441

Following gene: 183220425

Centisome position: 29.67

GC content: 45.93

Gene sequence:

>381_bases
ATGGAACTTGTCACCCAACACTTGGTCCAACCAGACGATTTAAACTACCACAACAATCTTTTTGGGGGGAAAATGCTCTC
CTGGATTGATGAGGGAATGGCAATGTATGTCATGAACAAAATCCGGTACACAAACATTGTGACCATGAGTATGGACAATG
TGGTGTTTCGCTCGCCGGCTCGGGCGGGTGACATCATCCAAATCTATGGAAAAATCGTAAAATACGGAAAATCTTCCATC
ACCTCACGAACCCTTGCCATCACAAACCACCCCCAAACGGGAAAGATGTCTGCCGTGATTGAAAGTGACATCACCTACGT
GTGTTTAGGTGAGAATGGAAAACCCACAGCCTATTTCCGTAACTTTACCCCTCCCACTTAG

Upstream 100 bases:

>100_bases
TAAGGCGGAAATCTTTTCTCTAGGGTTTTTGGTATCGAATAAATCGAAAACATATTTTTTGGTATTTATGGTCGAGACAA
TTCAGAACAAACTCCGGGAT

Downstream 100 bases:

>100_bases
GGAAGAGGGTTTGCGAATGGCCAAGTAAATTCAGAATCCTCCCTGCAATGAAATCACCCAGATCATCCAATGTTTTTGGC
ATTTGGTAAAACCCAGGAGA

Product: putative acyl-CoA thioester hydrolase

Products: NA

Alternate protein names: Acyl-CoA Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-CoA Thioester Hydrolase; Thioesterase Family Protein; Long-Chain Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase Family Protein; Acyl-CoA Thioester Hydrolase YciA; Thioesterase Family Protein Domain Protein; Acetyl-CoA Hydrolase; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MELVTQHLVQPDDLNYHNNLFGGKMLSWIDEGMAMYVMNKIRYTNIVTMSMDNVVFRSPARAGDIIQIYGKIVKYGKSSI
TSRTLAITNHPQTGKMSAVIESDITYVCLGENGKPTAYFRNFTPPT

Sequences:

>Translated_126_residues
MELVTQHLVQPDDLNYHNNLFGGKMLSWIDEGMAMYVMNKIRYTNIVTMSMDNVVFRSPARAGDIIQIYGKIVKYGKSSI
TSRTLAITNHPQTGKMSAVIESDITYVCLGENGKPTAYFRNFTPPT
>Mature_126_residues
MELVTQHLVQPDDLNYHNNLFGGKMLSWIDEGMAMYVMNKIRYTNIVTMSMDNVVFRSPARAGDIIQIYGKIVKYGKSSI
TSRTLAITNHPQTGKMSAVIESDITYVCLGENGKPTAYFRNFTPPT

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.2.- [C]

Molecular weight: Translated: 14185; Mature: 14185

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVTQHLVQPDDLNYHNNLFGGKMLSWIDEGMAMYVMNKIRYTNIVTMSMDNVVFRSPA
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHEEEEEEEECCCEEEECCC
RAGDIIQIYGKIVKYGKSSITSRTLAITNHPQTGKMSAVIESDITYVCLGENGKPTAYFR
CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCEEEC
NFTPPT
CCCCCC
>Mature Secondary Structure
MELVTQHLVQPDDLNYHNNLFGGKMLSWIDEGMAMYVMNKIRYTNIVTMSMDNVVFRSPA
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHEEEEEEEECCCEEEECCC
RAGDIIQIYGKIVKYGKSSITSRTLAITNHPQTGKMSAVIESDITYVCLGENGKPTAYFR
CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCEEEC
NFTPPT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA