Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220425
Identifier: 183220425
GI number: 183220425
Start: 1065408
End: 1066241
Strand: Reverse
Name: 183220425
Synonym: LEPBI_I1022
Alternate gene names: NA
Gene position: 1066241-1065408 (Counterclockwise)
Preceding gene: 183220428
Following gene: 183220421
Centisome position: 29.62
GC content: 41.49
Gene sequence:
>834_bases ATGAATATCCGTCTTTCCTTTCTTGGAAGATTCTCCCTGTCGATTTTGACAATTGGATTATTTCTTTCCGTTTCAATGGT TTTTGCTCACGAAAGTTTGGAAGACAGACCCCTTCGTTTCTTTTTCCACTGCGGAAAAGACCTATTCACGAAAATGGATG AGGAAGGACGCGGGGGACTCAGTGCCCTCCTTGGGTTTGTGGAGAGGGAGAAAATGGATTTGGACTTAAAACGTGGAAAA GGGTACATGTTGTATCCTTTTGGCAAAAAAGACAAACCATTGGAATTTCCATTTGATGGATTCCATTTATCCAAAACCAT AGAGATGGAACATGGGCCCGTCAAACTAGGTTTAGGTTCTATAGAAGGACTCATTACTGCCAAAAACACTGAGGAATTAG ATGGTTGGATTGTTTATGTGGGTCCAGATGAAGAAACCAAAATCCCCCTCATCCCTTGGCAAAACCACCCGGATCTTCCC ATCTTTTTACTCGTCGAAAAAAAACCACAAGCAAGGTTTCGTTACCTTTCCAATGTGCACCAAATTGAATGCCCAAAAGA CTATGGAAGGCTTGGTACACTCAATTTGTTTTTTAGGAAACGAAACTTGATTCGAATGGATTATAAACTGGAATCCATCA ATCTCACGGACCGCAATCGTTCTTGGAAACAAAGAAAGGAATCAGAAACAGAAGAAGGTTTGGAACAACCTATTCCGAAT AAGAAGGACATAGGGAAGAAAGAGGGCAATCCGAACAAAATGTACGGCGAGCCTGGCAATACTTCCGACCGAGAAATATT AGGTAAAGAGATAGGTTTCGGCAAATTTCCTTAG
Upstream 100 bases:
>100_bases AGTTCATGGCATCCTTTCTGCCCTTAGTTTAGACAGGCCGTAGGTTTTTTGGTTCATTCTGTTTCGAATTCTTCCGTTCT TAGAACCAAGGTCACAAAAT
Downstream 100 bases:
>100_bases GAGTGATCTTCATCATTTCCCGTTCGATTTGAATGGGATCCGTTTTTTTGGTAAACCCGAGGCGTTTTGTGAGCCGTTTC ACATGGGTATCCACCACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNIRLSFLGRFSLSILTIGLFLSVSMVFAHESLEDRPLRFFFHCGKDLFTKMDEEGRGGLSALLGFVEREKMDLDLKRGK GYMLYPFGKKDKPLEFPFDGFHLSKTIEMEHGPVKLGLGSIEGLITAKNTEELDGWIVYVGPDEETKIPLIPWQNHPDLP IFLLVEKKPQARFRYLSNVHQIECPKDYGRLGTLNLFFRKRNLIRMDYKLESINLTDRNRSWKQRKESETEEGLEQPIPN KKDIGKKEGNPNKMYGEPGNTSDREILGKEIGFGKFP
Sequences:
>Translated_277_residues MNIRLSFLGRFSLSILTIGLFLSVSMVFAHESLEDRPLRFFFHCGKDLFTKMDEEGRGGLSALLGFVEREKMDLDLKRGK GYMLYPFGKKDKPLEFPFDGFHLSKTIEMEHGPVKLGLGSIEGLITAKNTEELDGWIVYVGPDEETKIPLIPWQNHPDLP IFLLVEKKPQARFRYLSNVHQIECPKDYGRLGTLNLFFRKRNLIRMDYKLESINLTDRNRSWKQRKESETEEGLEQPIPN KKDIGKKEGNPNKMYGEPGNTSDREILGKEIGFGKFP >Mature_277_residues MNIRLSFLGRFSLSILTIGLFLSVSMVFAHESLEDRPLRFFFHCGKDLFTKMDEEGRGGLSALLGFVEREKMDLDLKRGK GYMLYPFGKKDKPLEFPFDGFHLSKTIEMEHGPVKLGLGSIEGLITAKNTEELDGWIVYVGPDEETKIPLIPWQNHPDLP IFLLVEKKPQARFRYLSNVHQIECPKDYGRLGTLNLFFRKRNLIRMDYKLESINLTDRNRSWKQRKESETEEGLEQPIPN KKDIGKKEGNPNKMYGEPGNTSDREILGKEIGFGKFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31945; Mature: 31945
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRLSFLGRFSLSILTIGLFLSVSMVFAHESLEDRPLRFFFHCGKDLFTKMDEEGRGGL CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCCH SALLGFVEREKMDLDLKRGKGYMLYPFGKKDKPLEFPFDGFHLSKTIEMEHGPVKLGLGS HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCC IEGLITAKNTEELDGWIVYVGPDEETKIPLIPWQNHPDLPIFLLVEKKPQARFRYLSNVH CCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCE QIECPKDYGRLGTLNLFFRKRNLIRMDYKLESINLTDRNRSWKQRKESETEEGLEQPIPN EEECCHHHCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC KKDIGKKEGNPNKMYGEPGNTSDREILGKEIGFGKFP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MNIRLSFLGRFSLSILTIGLFLSVSMVFAHESLEDRPLRFFFHCGKDLFTKMDEEGRGGL CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCCH SALLGFVEREKMDLDLKRGKGYMLYPFGKKDKPLEFPFDGFHLSKTIEMEHGPVKLGLGS HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCC IEGLITAKNTEELDGWIVYVGPDEETKIPLIPWQNHPDLPIFLLVEKKPQARFRYLSNVH CCEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCE QIECPKDYGRLGTLNLFFRKRNLIRMDYKLESINLTDRNRSWKQRKESETEEGLEQPIPN EEECCHHHCCCCEEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC KKDIGKKEGNPNKMYGEPGNTSDREILGKEIGFGKFP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA