Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220375
Identifier: 183220375
GI number: 183220375
Start: 1007198
End: 1008022
Strand: Direct
Name: 183220375
Synonym: LEPBI_I0971
Alternate gene names: NA
Gene position: 1007198-1008022 (Clockwise)
Preceding gene: 183220374
Following gene: 183220379
Centisome position: 27.98
GC content: 41.33
Gene sequence:
>825_bases TTGGTAATGTGGTTCGTTAAAACGAAAGCAATCCAAATTTCCTTCCTGGGAATTTACTTTTTATTGGGGGTATTTGTTTC CGGATGCCAAAGGCAAATTGTTTCGGAATCTCCAAACCAAGTGACCTTTCCTGGATCAATTACAAAGTTATCAGAGAATT CTTCACCCCAACATTTAGAGTGGATCAAAATCAAAGAGACGGTTTGGATCCACAAAAGTTTTGGTAATTTTTTAGGGAAA ACCTATGAATCCAATGGCCTTGTGGTCCTTTCGAGTCGGGGAGTTGTTGTCATTGATACCCCATGGACAGAGTCACAAAC GGAAGAACTGTTTGAGGGTATCAAAACCAAATTCCAAAAAGAAATTTTATTCCTGATTGTGACACATGCGCATGACGACC GTATGGCGGGAGTCACACAATTCCAAAACCGAAACATCCCTGTATATAGCACTTCTTTAACTTCAAAATTGGCAAAGGAA AAAGGACTTGGAAAAACAAATCCCATCTTGGATCTGCAAACAAGAGTTTCAGCGGGGAATGTTTCTGTAGAAATCTTTTT TCCAGGGCATGGGCACTCACCCGATAATATTGTGGTTTGGTTACCAAACACTCATATTCTTTTTGGTGGTTGCCTTGTGA AGGCTATCGATGCAACAGACTTGGGAAATGTGAAGGATGCAAATTTATTGGAATGGGAAAATGCAGTGAAACGAGTGTTA TCTCGTTACCCTGACGCAGAAGTTGTGGTGCCAGGGCATGGGAACTGGGGGAAACTGGATTTACTCCGCCATACGATACG ATTACTTGTTTCTACGAACCACTAA
Upstream 100 bases:
>100_bases AAGTGGTGGTGACAGACGATACTGTTCTGAAAAAAGAAGCACCCATTACAATTTTAAAGGGTGATATCGAAAAGATCGCT TAAAAAAAAGAAATGTTACT
Downstream 100 bases:
>100_bases GATGGACAGTTTTTCCATGGGATTTGTGAGATTTCGTTCGCGCCCGAGGGAACTCATCTTTTTGGCAATGGCAAGTAACA TCTGTCTAGAAGAACTTGGC
Product: putative beta-lactamase II
Products: NA
Alternate protein names: Beta-lactamase II; Penicillinase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MVMWFVKTKAIQISFLGIYFLLGVFVSGCQRQIVSESPNQVTFPGSITKLSENSSPQHLEWIKIKETVWIHKSFGNFLGK TYESNGLVVLSSRGVVVIDTPWTESQTEELFEGIKTKFQKEILFLIVTHAHDDRMAGVTQFQNRNIPVYSTSLTSKLAKE KGLGKTNPILDLQTRVSAGNVSVEIFFPGHGHSPDNIVVWLPNTHILFGGCLVKAIDATDLGNVKDANLLEWENAVKRVL SRYPDAEVVVPGHGNWGKLDLLRHTIRLLVSTNH
Sequences:
>Translated_274_residues MVMWFVKTKAIQISFLGIYFLLGVFVSGCQRQIVSESPNQVTFPGSITKLSENSSPQHLEWIKIKETVWIHKSFGNFLGK TYESNGLVVLSSRGVVVIDTPWTESQTEELFEGIKTKFQKEILFLIVTHAHDDRMAGVTQFQNRNIPVYSTSLTSKLAKE KGLGKTNPILDLQTRVSAGNVSVEIFFPGHGHSPDNIVVWLPNTHILFGGCLVKAIDATDLGNVKDANLLEWENAVKRVL SRYPDAEVVVPGHGNWGKLDLLRHTIRLLVSTNH >Mature_274_residues MVMWFVKTKAIQISFLGIYFLLGVFVSGCQRQIVSESPNQVTFPGSITKLSENSSPQHLEWIKIKETVWIHKSFGNFLGK TYESNGLVVLSSRGVVVIDTPWTESQTEELFEGIKTKFQKEILFLIVTHAHDDRMAGVTQFQNRNIPVYSTSLTSKLAKE KGLGKTNPILDLQTRVSAGNVSVEIFFPGHGHSPDNIVVWLPNTHILFGGCLVKAIDATDLGNVKDANLLEWENAVKRVL SRYPDAEVVVPGHGNWGKLDLLRHTIRLLVSTNH
Specific function: Can hydrolyze carbapenem compounds [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 30621; Mature: 30621
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00744 BETA_LACTAMASE_B_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMWFVKTKAIQISFLGIYFLLGVFVSGCQRQIVSESPNQVTFPGSITKLSENSSPQHLE CEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCEEE WIKIKETVWIHKSFGNFLGKTYESNGLVVLSSRGVVVIDTPWTESQTEELFEGIKTKFQK EEEEEEEEEEEHHHHHHHCCEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH EILFLIVTHAHDDRMAGVTQFQNRNIPVYSTSLTSKLAKEKGLGKTNPILDLQTRVSAGN EEEEEEEEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEEECCCC VSVEIFFPGHGHSPDNIVVWLPNTHILFGGCLVKAIDATDLGNVKDANLLEWENAVKRVL EEEEEEECCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH SRYPDAEVVVPGHGNWGKLDLLRHTIRLLVSTNH HHCCCCEEEECCCCCCCHHHHHHHHHHHEEECCC >Mature Secondary Structure MVMWFVKTKAIQISFLGIYFLLGVFVSGCQRQIVSESPNQVTFPGSITKLSENSSPQHLE CEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCCCEEE WIKIKETVWIHKSFGNFLGKTYESNGLVVLSSRGVVVIDTPWTESQTEELFEGIKTKFQK EEEEEEEEEEEHHHHHHHCCEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH EILFLIVTHAHDDRMAGVTQFQNRNIPVYSTSLTSKLAKEKGLGKTNPILDLQTRVSAGN EEEEEEEEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCEEEEEEEECCCC VSVEIFFPGHGHSPDNIVVWLPNTHILFGGCLVKAIDATDLGNVKDANLLEWENAVKRVL EEEEEEECCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH SRYPDAEVVVPGHGNWGKLDLLRHTIRLLVSTNH HHCCCCEEEECCCCCCCHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3938474 [H]