Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220369
Identifier: 183220369
GI number: 183220369
Start: 1000819
End: 1002117
Strand: Direct
Name: 183220369
Synonym: LEPBI_I0965
Alternate gene names: NA
Gene position: 1000819-1002117 (Clockwise)
Preceding gene: 183220368
Following gene: 183220370
Centisome position: 27.8
GC content: 40.88
Gene sequence:
>1299_bases TTGTTTATTAATTTATCCAACTTACGTAAACCAAAATTGATTTTGTTTTTTCGCATTGTTTTGGTATTTCTTTTGGGTAT TGTTGCATTATCTGCAGAAGAGATCAAACAACCAAACCCAAGCGTTGTTCCCAAAAAGGATTCAAGCGTGACATCGGATC AATCGAAACCGATCCAAAATCCGAGTCCAGACCAAAACCCAATCCCCAATCCTAACTCAAACTCAAACGCAAATCCATTC ACCAATCTTTTTGAAAGAGAAGACAACCAAAGGCCAATGGAGATTTTCAATCAGGTTTATGAACATCGATTGATGATTCG GACCGGTTGGGGGATTGGAAAATTATCACCAGCCATTCTGAATGAAACGGGTCCCGCTTGGTTTCAGAATTCACTCTTTC GGCAAATGACAGAACCAGGTGCTCCCCTTTCCATTCCTTATAAACCAGCAAAAGATTTGGGGCTTAATTCTCAGTTTTTT GACATCCGTTATGGATACAAAAACAAATACGAAATCCAATTTGCAGAAGATACTTCGCTTGGTGTTTATAGTCGGGACCT ACCTGCTTCCAATAATTTTATTTCTCCAAGGACAGATTCCTATTGGGCTAGTAGTTTTGAAGGGAATCGACTCCTTCGAT TTGAAGGTGTGAGCCAACACCTACGTTTTTCTTACACTCATCCCATCACAAAAATTTTGATGGTTGGGCCCTCTGTCAAC TTCCACCGTTATACGGAACGAAATAATATTTCTTATGGATCCTATTCTACCAGTCGCCCAGAGGCTACAGTTCCGAATAA AGTCACTTGGTCGATCGGTGGGGATGCGAATGCAGAATATTCGATGAAAGGAATTTTGCCTGGAGTTTATGCCAAGTTAA AACTCAAAGATTGGTGGGAGATCAGAGGACGACTCGAGCTTCTTGACCGGAAAGGTAATTTTTCTGTGTTAGGTTCTCAA ATCATCCAAGAAGTGTACAATGATGGCACTTCCAACCTAACGGGCGTTGTCCCAGCATACGGCGGAAAAGTCCGAGACAA AGGGACAATTTTGAATTTGGAGACTTCATTTCAATACTGTCGCTTTAGTCTCGACATTGGGATGATCCGACAAGACGTCA AACGAAACTATGATACGTATTTGGGAGACACAATTGGGAACGTCCCAAGGACTGATTATTCGTCAAGAAGTGTTGGGATC GGATTTTCTGAAATGTCAACATCTATCAAACATACAGTGACAGAGTTTTATATCATGCCTGGTGTTTCGTTTTATTACGA TGAGGACAAAATTTACTAG
Upstream 100 bases:
>100_bases AAGGAAGTAGATGGGTATGCGGACCAGCAGAAAATCGTTGATACCATGTTAGCTGAGAAAAAAAACCGTAGGACCGAAAT TTACGTAGGGACAGTTCGCA
Downstream 100 bases:
>100_bases AATGAGTTTTTTGCCTACACTCAAACGTTTGATCCTTGCTTGGATTGTGAAGTTTGGGTGGTGAATTGATTTAAAAATGT TTGATTTTTCCTGAATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MFINLSNLRKPKLILFFRIVLVFLLGIVALSAEEIKQPNPSVVPKKDSSVTSDQSKPIQNPSPDQNPIPNPNSNSNANPF TNLFEREDNQRPMEIFNQVYEHRLMIRTGWGIGKLSPAILNETGPAWFQNSLFRQMTEPGAPLSIPYKPAKDLGLNSQFF DIRYGYKNKYEIQFAEDTSLGVYSRDLPASNNFISPRTDSYWASSFEGNRLLRFEGVSQHLRFSYTHPITKILMVGPSVN FHRYTERNNISYGSYSTSRPEATVPNKVTWSIGGDANAEYSMKGILPGVYAKLKLKDWWEIRGRLELLDRKGNFSVLGSQ IIQEVYNDGTSNLTGVVPAYGGKVRDKGTILNLETSFQYCRFSLDIGMIRQDVKRNYDTYLGDTIGNVPRTDYSSRSVGI GFSEMSTSIKHTVTEFYIMPGVSFYYDEDKIY
Sequences:
>Translated_432_residues MFINLSNLRKPKLILFFRIVLVFLLGIVALSAEEIKQPNPSVVPKKDSSVTSDQSKPIQNPSPDQNPIPNPNSNSNANPF TNLFEREDNQRPMEIFNQVYEHRLMIRTGWGIGKLSPAILNETGPAWFQNSLFRQMTEPGAPLSIPYKPAKDLGLNSQFF DIRYGYKNKYEIQFAEDTSLGVYSRDLPASNNFISPRTDSYWASSFEGNRLLRFEGVSQHLRFSYTHPITKILMVGPSVN FHRYTERNNISYGSYSTSRPEATVPNKVTWSIGGDANAEYSMKGILPGVYAKLKLKDWWEIRGRLELLDRKGNFSVLGSQ IIQEVYNDGTSNLTGVVPAYGGKVRDKGTILNLETSFQYCRFSLDIGMIRQDVKRNYDTYLGDTIGNVPRTDYSSRSVGI GFSEMSTSIKHTVTEFYIMPGVSFYYDEDKIY >Mature_432_residues MFINLSNLRKPKLILFFRIVLVFLLGIVALSAEEIKQPNPSVVPKKDSSVTSDQSKPIQNPSPDQNPIPNPNSNSNANPF TNLFEREDNQRPMEIFNQVYEHRLMIRTGWGIGKLSPAILNETGPAWFQNSLFRQMTEPGAPLSIPYKPAKDLGLNSQFF DIRYGYKNKYEIQFAEDTSLGVYSRDLPASNNFISPRTDSYWASSFEGNRLLRFEGVSQHLRFSYTHPITKILMVGPSVN FHRYTERNNISYGSYSTSRPEATVPNKVTWSIGGDANAEYSMKGILPGVYAKLKLKDWWEIRGRLELLDRKGNFSVLGSQ IIQEVYNDGTSNLTGVVPAYGGKVRDKGTILNLETSFQYCRFSLDIGMIRQDVKRNYDTYLGDTIGNVPRTDYSSRSVGI GFSEMSTSIKHTVTEFYIMPGVSFYYDEDKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49084; Mature: 49084
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINLSNLRKPKLILFFRIVLVFLLGIVALSAEEIKQPNPSVVPKKDSSVTSDQSKPIQN CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PSPDQNPIPNPNSNSNANPFTNLFEREDNQRPMEIFNQVYEHRLMIRTGWGIGKLSPAIL CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHH NETGPAWFQNSLFRQMTEPGAPLSIPYKPAKDLGLNSQFFDIRYGYKNKYEIQFAEDTSL CCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCC GVYSRDLPASNNFISPRTDSYWASSFEGNRLLRFEGVSQHLRFSYTHPITKILMVGPSVN CEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHEEEECCCCEEEEEECCCCC FHRYTERNNISYGSYSTSRPEATVPNKVTWSIGGDANAEYSMKGILPGVYAKLKLKDWWE EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCEEEEEECHHHH IRGRLELLDRKGNFSVLGSQIIQEVYNDGTSNLTGVVPAYGGKVRDKGTILNLETSFQYC HCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCEEEEEECCCEEE RFSLDIGMIRQDVKRNYDTYLGDTIGNVPRTDYSSRSVGIGFSEMSTSIKHTVTEFYIMP EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEC GVSFYYDEDKIY CEEEEECCCCCC >Mature Secondary Structure MFINLSNLRKPKLILFFRIVLVFLLGIVALSAEEIKQPNPSVVPKKDSSVTSDQSKPIQN CEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PSPDQNPIPNPNSNSNANPFTNLFEREDNQRPMEIFNQVYEHRLMIRTGWGIGKLSPAIL CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHH NETGPAWFQNSLFRQMTEPGAPLSIPYKPAKDLGLNSQFFDIRYGYKNKYEIQFAEDTSL CCCCCHHHHHHHHHHHCCCCCCEECCCCCHHHCCCCCEEEEEEECCCCEEEEEEECCCCC GVYSRDLPASNNFISPRTDSYWASSFEGNRLLRFEGVSQHLRFSYTHPITKILMVGPSVN CEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHEEEECCCCEEEEEECCCCC FHRYTERNNISYGSYSTSRPEATVPNKVTWSIGGDANAEYSMKGILPGVYAKLKLKDWWE EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCEEEEEECHHHH IRGRLELLDRKGNFSVLGSQIIQEVYNDGTSNLTGVVPAYGGKVRDKGTILNLETSFQYC HCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCEEEEEECCCEEE RFSLDIGMIRQDVKRNYDTYLGDTIGNVPRTDYSSRSVGIGFSEMSTSIKHTVTEFYIMP EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEC GVSFYYDEDKIY CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA