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The map label for this gene is yiaD [C]

Identifier: 183220368

GI number: 183220368

Start: 1000140

End: 1000829

Strand: Direct

Name: yiaD [C]

Synonym: LEPBI_I0964

Alternate gene names: 183220368

Gene position: 1000140-1000829 (Clockwise)

Preceding gene: 183220366

Following gene: 183220369

Centisome position: 27.78

GC content: 42.75

Gene sequence:

>690_bases
ATGTTTAGAAATTTATTGATCATTTTGATTGCTTCCCTTTTTGGATTCCAATGCCAAACCACCACCAATCCAGAGTGGAT
GGAGTCTGAATCCTTCCAAAAGTTCTGCGGTTGTGTTCATATCGATGAAACCAAACCGAGTGAACATCTCGGCAGTTTGC
CTGTGGGTTCTTTAGATAAACTAGGGACACCAGATTATTTAGAAAAATTATACAAAGGTCTTCGCAGTGACTTTGAACAC
ACAGGCACTCCATTCGAAGAAGTAGGTGGGAGCCTTGTTGCCAAAGGGGTGGAACTGAAACGGATCGAAGACGATGAAAA
AAGATTACGTGAACTCCTCATCATCATTGATGGAGACGTCGCCTTCCCTTCCGGAAAATCAACACTCACTCCCAAAGCAA
AGGAACTCATTGCAAAAGTAGGGGATGCGATGGAAGCATACCCGGAAACCAATTGTCGGATTGGTGGGCATACTGACAGC
GTGGGTGCTTTTTCAATGAATTTGAAATTGAGCAAAGAAAGATCCCAGTCCGTAAAAAGGGAACTCAAACTCGTTCACAA
AATTGCAGAAGAGCGATTTAAGGAAGTAGATGGGTATGCGGACCAGCAGAAAATCGTTGATACCATGTTAGCTGAGAAAA
AAAACCGTAGGACCGAAATTTACGTAGGGACAGTTCGCATTGTTTATTAA

Upstream 100 bases:

>100_bases
AAAAATGAGATAAGGTTTGGAAATAAATTTCTGTTCGTTCTCCCTTTGAATTATCAATTGATTTCTTATGTTGGTGCAAA
AGATAAGGACAGTTTGTTTT

Downstream 100 bases:

>100_bases
TTTATCCAACTTACGTAAACCAAAATTGATTTTGTTTTTTCGCATTGTTTTGGTATTTCTTTTGGGTATTGTTGCATTAT
CTGCAGAAGAGATCAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Domain-Containing Protein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDKLGTPDYLEKLYKGLRSDFEH
TGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDS
VGAFSMNLKLSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRRTEIYVGTVRIVY

Sequences:

>Translated_229_residues
MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDKLGTPDYLEKLYKGLRSDFEH
TGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDS
VGAFSMNLKLSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRRTEIYVGTVRIVY
>Mature_229_residues
MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDKLGTPDYLEKLYKGLRSDFEH
TGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDS
VGAFSMNLKLSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRRTEIYVGTVRIVY

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25762; Mature: 25762

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCCCC
LGTPDYLEKLYKGLRSDFEHTGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDV
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCHHHHCCCHHHHHHHHEEEEECCE
AFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDSVGAFSMNLKLSKERSQSVKR
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEECHHHHHHHHH
ELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRRTEIYVGTVRIVY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MFRNLLIILIASLFGFQCQTTTNPEWMESESFQKFCGCVHIDETKPSEHLGSLPVGSLDK
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCCCC
LGTPDYLEKLYKGLRSDFEHTGTPFEEVGGSLVAKGVELKRIEDDEKRLRELLIIIDGDV
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCHHHHCCCHHHHHHHHEEEEECCE
AFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDSVGAFSMNLKLSKERSQSVKR
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEECHHHHHHHHH
ELKLVHKIAEERFKEVDGYADQQKIVDTMLAEKKNRRTEIYVGTVRIVY
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA