Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220332
Identifier: 183220332
GI number: 183220332
Start: 960340
End: 960804
Strand: Direct
Name: 183220332
Synonym: LEPBI_I0928
Alternate gene names: NA
Gene position: 960340-960804 (Clockwise)
Preceding gene: 183220331
Following gene: 183220333
Centisome position: 26.68
GC content: 40.43
Gene sequence:
>465_bases ATGTTCACACGGTTTTGTTTGTCTTTCCTATTGTTTTTGGTGGTTGTTTGCAAACAGGCGGAATCCTTTCCGTCGCAAAC GAATACCCCTGAAATTTTATTTGGAAGTGTTGCAGACCGTGTTTTAAAATTGGAAATTGCCAATTCTCCTTCGACACGTG CTACAGGTCTTATGTACCGCACAAAACTGGGAGAAGACGAAGGTATGCTTTTTGTTTTTCCAAGGCCTGATTATTTGAAC TTTTGGATGAAAAACACACTCATCCCATTATCAATTGGTTATTTTTCAGAAGATATGCGACTTTTAGAATCATTCGATAT GAAACCGAACCAAACGGATGAAGTTTACAACGCCAGCAGACCGGCGATGTATGCGTTGGAGGTCAACCAAGGTTGGTTTG CTAAACACAAAATCGGGAAAGATGCTGTTCTCACCTTAGAGCGAAAAGTCTCTGCAAAAGATTAA
Upstream 100 bases:
>100_bases GAAAAACAATTGTTTGGTGGAAGATTCGCAGATCAGGAAACAAAAGAAGGTCTCTCTGCTTTCCTCGAAAAAAGGAAACC TAATTTTTAAGGGAATGGTT
Downstream 100 bases:
>100_bases ATTTTTTCTTTTTACTTGAATCCTAACTTTGAGGTGTTTACCATTTCGAAGCATGGTAGTCAACAATCCTCGTCTCATCA ATTTATTATCCGAAGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MFTRFCLSFLLFLVVVCKQAESFPSQTNTPEILFGSVADRVLKLEIANSPSTRATGLMYRTKLGEDEGMLFVFPRPDYLN FWMKNTLIPLSIGYFSEDMRLLESFDMKPNQTDEVYNASRPAMYALEVNQGWFAKHKIGKDAVLTLERKVSAKD
Sequences:
>Translated_154_residues MFTRFCLSFLLFLVVVCKQAESFPSQTNTPEILFGSVADRVLKLEIANSPSTRATGLMYRTKLGEDEGMLFVFPRPDYLN FWMKNTLIPLSIGYFSEDMRLLESFDMKPNQTDEVYNASRPAMYALEVNQGWFAKHKIGKDAVLTLERKVSAKD >Mature_154_residues MFTRFCLSFLLFLVVVCKQAESFPSQTNTPEILFGSVADRVLKLEIANSPSTRATGLMYRTKLGEDEGMLFVFPRPDYLN FWMKNTLIPLSIGYFSEDMRLLESFDMKPNQTDEVYNASRPAMYALEVNQGWFAKHKIGKDAVLTLERKVSAKD
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17638; Mature: 17638
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRFCLSFLLFLVVVCKQAESFPSQTNTPEILFGSVADRVLKLEIANSPSTRATGLMYR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCEEEEEEECCCCCCCHHEEEEE TKLGEDEGMLFVFPRPDYLNFWMKNTLIPLSIGYFSEDMRLLESFDMKPNQTDEVYNASR ECCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCC PAMYALEVNQGWFAKHKIGKDAVLTLERKVSAKD CEEEEEEECCCEEEHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MFTRFCLSFLLFLVVVCKQAESFPSQTNTPEILFGSVADRVLKLEIANSPSTRATGLMYR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCEEEEEEECCCCCCCHHEEEEE TKLGEDEGMLFVFPRPDYLNFWMKNTLIPLSIGYFSEDMRLLESFDMKPNQTDEVYNASR ECCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHCCCC PAMYALEVNQGWFAKHKIGKDAVLTLERKVSAKD CEEEEEEECCCEEEHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA