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The map label for this gene is 183220277

Identifier: 183220277

GI number: 183220277

Start: 891471

End: 892394

Strand: Direct

Name: 183220277

Synonym: LEPBI_I0872

Alternate gene names: NA

Gene position: 891471-892394 (Clockwise)

Preceding gene: 183220276

Following gene: 183220278

Centisome position: 24.77

GC content: 38.64

Gene sequence:

>924_bases
TTGTTCGGGAATCCGATCCTTCATCCTTTGAACGTCATTTTAATCCTCAATTGTTTTATCTTTTTTTTACAATACTTTGC
CAACCAACAACTAGTGTTTCGGTTTGGACTCACACCAGATTTTGTACTGAGTGGAGCCGTTTGGCAAATCTTCACTTATG
GTTTTTTACATGAGGTAGGTTTACTCCCACTTCATTTATTTTTCAACATGTATGGGATGTACATGTTAGGGAATCATATC
ATTCCTATCATCGGGAAAACCAAATTTACGATTTTGTATTTTGTATCTCAAGTAGGGGCAGGGATTTTTGTTGTTCTCTC
TGCCTATTTGAACGTTGTGTTAGGTGGTCAAGTTCCGTTACTAGAATCGATGACTTCACAAACCATTGGTGCTTCCGGAG
CAATTTTCGGCTTACTTGCGTTATTTGGTATTTTTTATCCAAATGCAGAATTGTTATTATTTATCATTCCAGTGAAAGCG
AAAAATGCAGTGTGGGCTGCGTTACTCATCGGATTTTTGATTTCTCAATTTGGGAATGGATCCATTTCCAGTACTTGCCA
TTTAGGTGGTGCACTGACGGCCCTCCTTGTCATCAAACTTTTCCCAAAACATTTTTTACCAAGCACAATCCCATACCTTC
CTGGTTTAGAATGGGAATCTCCCAAACAAAAAGAAACAAACTTCCAATCAAAAGCCAAACAGGTCCCTGTGGAAGATTTG
TTCCAAGACCAAAAAAAATCCAACGAATCCATTTTAAAACAAATCGAACTCAAAAAAGACACGAGTTCGGTAATAAATTA
TTTACAGCCACTCCAGGTGGAAAACGCCAATATTTGCCCTCCTTCTACGTATAATACCGAGGATCCAATTTGTTTGCGTT
GTGAGTGGTTACCAAATTGTGCCTTACGTAAGGCGAAGGCATAA

Upstream 100 bases:

>100_bases
ATTCCGAAAGGATTCCCCCTTTTTTTATTTCCCTTGTTTCTTTCCCTAGACTCTAAATTTTGGAAGTACCATGAGTAGAA
ATCGAAGCCAGGGCGCTAGT

Downstream 100 bases:

>100_bases
TTTTTCGTCTTATTCCTTGACACTCATGTGAGATAGGGATAATGAAACCATGCCTGATGAAAAAAAGTCCTCAGTAGATG
AGGTACTAAAACGCGAAAAA

Product: putative rhomboid-like protein

Products: NA

Alternate protein names: Transmembrane Rhomboid Family Protein; Peptidase; Cytoplasmic Membrane Protein; Rhomboid-Like Protein; Serine Protease; Integral Membrane Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MFGNPILHPLNVILILNCFIFFLQYFANQQLVFRFGLTPDFVLSGAVWQIFTYGFLHEVGLLPLHLFFNMYGMYMLGNHI
IPIIGKTKFTILYFVSQVGAGIFVVLSAYLNVVLGGQVPLLESMTSQTIGASGAIFGLLALFGIFYPNAELLLFIIPVKA
KNAVWAALLIGFLISQFGNGSISSTCHLGGALTALLVIKLFPKHFLPSTIPYLPGLEWESPKQKETNFQSKAKQVPVEDL
FQDQKKSNESILKQIELKKDTSSVINYLQPLQVENANICPPSTYNTEDPICLRCEWLPNCALRKAKA

Sequences:

>Translated_307_residues
MFGNPILHPLNVILILNCFIFFLQYFANQQLVFRFGLTPDFVLSGAVWQIFTYGFLHEVGLLPLHLFFNMYGMYMLGNHI
IPIIGKTKFTILYFVSQVGAGIFVVLSAYLNVVLGGQVPLLESMTSQTIGASGAIFGLLALFGIFYPNAELLLFIIPVKA
KNAVWAALLIGFLISQFGNGSISSTCHLGGALTALLVIKLFPKHFLPSTIPYLPGLEWESPKQKETNFQSKAKQVPVEDL
FQDQKKSNESILKQIELKKDTSSVINYLQPLQVENANICPPSTYNTEDPICLRCEWLPNCALRKAKA
>Mature_307_residues
MFGNPILHPLNVILILNCFIFFLQYFANQQLVFRFGLTPDFVLSGAVWQIFTYGFLHEVGLLPLHLFFNMYGMYMLGNHI
IPIIGKTKFTILYFVSQVGAGIFVVLSAYLNVVLGGQVPLLESMTSQTIGASGAIFGLLALFGIFYPNAELLLFIIPVKA
KNAVWAALLIGFLISQFGNGSISSTCHLGGALTALLVIKLFPKHFLPSTIPYLPGLEWESPKQKETNFQSKAKQVPVEDL
FQDQKKSNESILKQIELKKDTSSVINYLQPLQVENANICPPSTYNTEDPICLRCEWLPNCALRKAKA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34185; Mature: 34185

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGNPILHPLNVILILNCFIFFLQYFANQQLVFRFGLTPDFVLSGAVWQIFTYGFLHEVG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LLPLHLFFNMYGMYMLGNHIIPIIGKTKFTILYFVSQVGAGIFVVLSAYLNVVLGGQVPL
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
LESMTSQTIGASGAIFGLLALFGIFYPNAELLLFIIPVKAKNAVWAALLIGFLISQFGNG
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
SISSTCHLGGALTALLVIKLFPKHFLPSTIPYLPGLEWESPKQKETNFQSKAKQVPVEDL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
FQDQKKSNESILKQIELKKDTSSVINYLQPLQVENANICPPSTYNTEDPICLRCEWLPNC
HHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
ALRKAKA
HHHCCCC
>Mature Secondary Structure
MFGNPILHPLNVILILNCFIFFLQYFANQQLVFRFGLTPDFVLSGAVWQIFTYGFLHEVG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LLPLHLFFNMYGMYMLGNHIIPIIGKTKFTILYFVSQVGAGIFVVLSAYLNVVLGGQVPL
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH
LESMTSQTIGASGAIFGLLALFGIFYPNAELLLFIIPVKAKNAVWAALLIGFLISQFGNG
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
SISSTCHLGGALTALLVIKLFPKHFLPSTIPYLPGLEWESPKQKETNFQSKAKQVPVEDL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
FQDQKKSNESILKQIELKKDTSSVINYLQPLQVENANICPPSTYNTEDPICLRCEWLPNC
HHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
ALRKAKA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA