Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220272
Identifier: 183220272
GI number: 183220272
Start: 886630
End: 887793
Strand: Direct
Name: 183220272
Synonym: LEPBI_I0867
Alternate gene names: NA
Gene position: 886630-887793 (Clockwise)
Preceding gene: 183220271
Following gene: 183220274
Centisome position: 24.63
GC content: 40.98
Gene sequence:
>1164_bases ATGGTTCGGCTCTTCCTTCTTCCCATTTTCCTTTTTTCTACACTCATGGCTCAGTCACCATCTGACCGAATGGCATTTGC CTTTCGAAGCCAATCATCCCTTGATCCTTTACGTATGATCGTAGTTGGAGAAGTCGTAGGGATTGAAAAAGCGAGTTTTT ACGAAGTGGATAAACTCTCTCAAGAATTGGAAGTGGACACAAGGCCAGACACTGTGACAATCAAGGTGGCTGATCCAAAG GGAATTCGTGTTGGGCAAACCTTATACCTTTTAGAAAAAAACCAAGACCACAAAACCTTTCGTGAAGGGAATATTGTGGG AATGATCACTGTTAAATCCGTTTACCTCACCACTTTTTTTGGATGGCAAGTTAGGGGTGAAGGATATTTACGTCTGATTG AAGATCGCCCAGTCACTGCCGCTCGGTTACTAGACACAACCAAGTATGAAGAAGCCTTCCTTGCGAAAAAACAAGGAGAC CATTATTTCGCCAAAGGGCAAATGGAAGAAGCCCTTCGAAAATACAAACATGCAGTCTCTCTTGATCAAAGTTCACCTGA CTTACATTATGCGCTAGGGAAAGCCCACTGGAAAGATGGGGAAGGTTATGTATCCACTGCATTTGAATATTCCATGGCAT GGAAAAATAGAGAACGATTTTCGAATGCCCAAGAACGTCTGTTATTTCTTGTCGATTATTTACGATTTTTGACTTATTAT TTTAAAATCGAAGGCAAAGAAAATAAAAAACAATTGGAGCTTATGCCTCAGGTTGCCAAGGAAGCTCGTACTTTGTATCC CAAAATATATGAAGTATGGCTTTATAGTTTTGAAGTCACTTTCCTCAGTCTTTTGCATACCAATCTTTCAGGGAATACAG TTGACCTTCGAAAATCACGAGATGAACTCTCCAGTCGCTCGGAAGAATTTTTGAATAAAGCTTATTCACTTCGGAAATCG GATTATTACCTTCACAAACTTGCTTGCGAATTCTACAATCTACGATGGAAGGAAACAAGGGGCACAGTCGAAGAAACCAC GTACCGATCAAAACTAGTGGAACATGGGAAACTATTACGTTTGTATTATACGGGTGAAACCACTCTCTCAGAAGATTTGC TCAATGCCATCAGGCTTGCCGAAAAACAATCCGGATTACTCTGA
Upstream 100 bases:
>100_bases TTAGAATTCCAACCTAAATAAGAGAATTTTCCCTACCAGAGGCGGTAGGGAATTTTTTTTCTACTCACTGACTTTTGGAA TCGGCCGATCCTTAGTATAG
Downstream 100 bases:
>100_bases AAGGATTTTCATACTCTTTTCGAATAAATATGATTCTAAAAATAACATATCGTCTGGTGCTGAACTAAAATAATTCACAC CCAAATGGTAGTGATCCCCT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MVRLFLLPIFLFSTLMAQSPSDRMAFAFRSQSSLDPLRMIVVGEVVGIEKASFYEVDKLSQELEVDTRPDTVTIKVADPK GIRVGQTLYLLEKNQDHKTFREGNIVGMITVKSVYLTTFFGWQVRGEGYLRLIEDRPVTAARLLDTTKYEEAFLAKKQGD HYFAKGQMEEALRKYKHAVSLDQSSPDLHYALGKAHWKDGEGYVSTAFEYSMAWKNRERFSNAQERLLFLVDYLRFLTYY FKIEGKENKKQLELMPQVAKEARTLYPKIYEVWLYSFEVTFLSLLHTNLSGNTVDLRKSRDELSSRSEEFLNKAYSLRKS DYYLHKLACEFYNLRWKETRGTVEETTYRSKLVEHGKLLRLYYTGETTLSEDLLNAIRLAEKQSGLL
Sequences:
>Translated_387_residues MVRLFLLPIFLFSTLMAQSPSDRMAFAFRSQSSLDPLRMIVVGEVVGIEKASFYEVDKLSQELEVDTRPDTVTIKVADPK GIRVGQTLYLLEKNQDHKTFREGNIVGMITVKSVYLTTFFGWQVRGEGYLRLIEDRPVTAARLLDTTKYEEAFLAKKQGD HYFAKGQMEEALRKYKHAVSLDQSSPDLHYALGKAHWKDGEGYVSTAFEYSMAWKNRERFSNAQERLLFLVDYLRFLTYY FKIEGKENKKQLELMPQVAKEARTLYPKIYEVWLYSFEVTFLSLLHTNLSGNTVDLRKSRDELSSRSEEFLNKAYSLRKS DYYLHKLACEFYNLRWKETRGTVEETTYRSKLVEHGKLLRLYYTGETTLSEDLLNAIRLAEKQSGLL >Mature_387_residues MVRLFLLPIFLFSTLMAQSPSDRMAFAFRSQSSLDPLRMIVVGEVVGIEKASFYEVDKLSQELEVDTRPDTVTIKVADPK GIRVGQTLYLLEKNQDHKTFREGNIVGMITVKSVYLTTFFGWQVRGEGYLRLIEDRPVTAARLLDTTKYEEAFLAKKQGD HYFAKGQMEEALRKYKHAVSLDQSSPDLHYALGKAHWKDGEGYVSTAFEYSMAWKNRERFSNAQERLLFLVDYLRFLTYY FKIEGKENKKQLELMPQVAKEARTLYPKIYEVWLYSFEVTFLSLLHTNLSGNTVDLRKSRDELSSRSEEFLNKAYSLRKS DYYLHKLACEFYNLRWKETRGTVEETTYRSKLVEHGKLLRLYYTGETTLSEDLLNAIRLAEKQSGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45107; Mature: 45107
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLFLLPIFLFSTLMAQSPSDRMAFAFRSQSSLDPLRMIVVGEVVGIEKASFYEVDKLS CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHEEHHHHCCCCCCHHHHHHHH QELEVDTRPDTVTIKVADPKGIRVGQTLYLLEKNQDHKTFREGNIVGMITVKSVYLTTFF HHCCCCCCCCEEEEEEECCCCCEECCEEEEEECCCCCCHHHCCCEEEEEEEHHEEEEHEE GWQVRGEGYLRLIEDRPVTAARLLDTTKYEEAFLAKKQGDHYFAKGQMEEALRKYKHAVS CEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHC LDQSSPDLHYALGKAHWKDGEGYVSTAFEYSMAWKNRERFSNAQERLLFLVDYLRFLTYY CCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE FKIEGKENKKQLELMPQVAKEARTLYPKIYEVWLYSFEVTFLSLLHTNLSGNTVDLRKSR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH DELSSRSEEFLNKAYSLRKSDYYLHKLACEFYNLRWKETRGTVEETTYRSKLVEHGKLLR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCEEE LYYTGETTLSEDLLNAIRLAEKQSGLL EEECCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRLFLLPIFLFSTLMAQSPSDRMAFAFRSQSSLDPLRMIVVGEVVGIEKASFYEVDKLS CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHEEHHHHCCCCCCHHHHHHHH QELEVDTRPDTVTIKVADPKGIRVGQTLYLLEKNQDHKTFREGNIVGMITVKSVYLTTFF HHCCCCCCCCEEEEEEECCCCCEECCEEEEEECCCCCCHHHCCCEEEEEEEHHEEEEHEE GWQVRGEGYLRLIEDRPVTAARLLDTTKYEEAFLAKKQGDHYFAKGQMEEALRKYKHAVS CEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHC LDQSSPDLHYALGKAHWKDGEGYVSTAFEYSMAWKNRERFSNAQERLLFLVDYLRFLTYY CCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHE FKIEGKENKKQLELMPQVAKEARTLYPKIYEVWLYSFEVTFLSLLHTNLSGNTVDLRKSR EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH DELSSRSEEFLNKAYSLRKSDYYLHKLACEFYNLRWKETRGTVEETTYRSKLVEHGKLLR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCCCEEE LYYTGETTLSEDLLNAIRLAEKQSGLL EEECCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA