| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220266
Identifier: 183220266
GI number: 183220266
Start: 877749
End: 878555
Strand: Reverse
Name: 183220266
Synonym: LEPBI_I0859
Alternate gene names: NA
Gene position: 878555-877749 (Counterclockwise)
Preceding gene: 183220267
Following gene: 183220265
Centisome position: 24.41
GC content: 45.6
Gene sequence:
>807_bases ATGCGTAGCTCAATCACAACAATACTTGCGTTCCTCGTAGCAGGATCGCTGAGTGCACAAACCTATACCGTGTTCATTCA CGGTAAGTCGGACAAAAACCACAATGGTGTGGGAACAACAGATGTAAACGGATACTGGGGATCATCCACTAGTACAGTTT CTGGATCCAAAATCTTCATCGGTTACGATGGAACAACAGATCCGAGAACATACGGATCTTCCCGTGCACAATCAAACATT TCCACAGGACTCACAAACTATTGCAAAGGTGCGAACTCTTGCAAAATCGTTTGCCACTCTGCTGGTTGTTATGCGATCGA ATATTGGTTGTCCAACTTAGGTTCTACTGCATCTTCCAAAGGTTTTAACCTAACAAAAGTGACGGCACTTGCTGCGGCTT CTGGCGGGTCAGAACTTGCTTCTGCTCTGAACGGAATCAGTTTCGGATTTGGTGGAAACGCGATGGACAAGTCCCTCATC GTATCCACTGCTCGCGGTGCTTTCAATCATAACAACACTGCTGGTGTAGCTGTGAACCATGTACCTGGTTACAAAGGTAT GTTTGGTGCATCTGCAATCCTTCCTGGTGAAGATGATTACGCAGTTGCTTACCACTCTTCTTGTGGTTACAACAAAGCAG GTGGCCTTAACAAATGCCAATCTTCTCTCACACAAAGCGAAGGGATCTGGCCATTCAACAAAAATGTAACTTACACACAG TACAGCGGACACTACAGAGCTCCGTCTGTTACATCCACTGGTCTATACCTTGACCATAGCGAGATCAAAAAAGAAGGATA CCGATAG
Upstream 100 bases:
>100_bases GTTTCATCCGCTGGATTGTATCTAGACCATGGTCAGATCAAAAAAGAAGGTTGGAGATAATTTTTAGGATTTATTGAAAG AAAGGAAAAGGAAAAAAGAG
Downstream 100 bases:
>100_bases AATCGGATCTAAGCTCCCAACTACAGATCCTTTAGTCGGAAGTGAAAAAGACCAGCCAAATTGGCTGGTCTTTTTTTTTG CCCCAATATAATATAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRSSITTILAFLVAGSLSAQTYTVFIHGKSDKNHNGVGTTDVNGYWGSSTSTVSGSKIFIGYDGTTDPRTYGSSRAQSNI STGLTNYCKGANSCKIVCHSAGCYAIEYWLSNLGSTASSKGFNLTKVTALAAASGGSELASALNGISFGFGGNAMDKSLI VSTARGAFNHNNTAGVAVNHVPGYKGMFGASAILPGEDDYAVAYHSSCGYNKAGGLNKCQSSLTQSEGIWPFNKNVTYTQ YSGHYRAPSVTSTGLYLDHSEIKKEGYR
Sequences:
>Translated_268_residues MRSSITTILAFLVAGSLSAQTYTVFIHGKSDKNHNGVGTTDVNGYWGSSTSTVSGSKIFIGYDGTTDPRTYGSSRAQSNI STGLTNYCKGANSCKIVCHSAGCYAIEYWLSNLGSTASSKGFNLTKVTALAAASGGSELASALNGISFGFGGNAMDKSLI VSTARGAFNHNNTAGVAVNHVPGYKGMFGASAILPGEDDYAVAYHSSCGYNKAGGLNKCQSSLTQSEGIWPFNKNVTYTQ YSGHYRAPSVTSTGLYLDHSEIKKEGYR >Mature_268_residues MRSSITTILAFLVAGSLSAQTYTVFIHGKSDKNHNGVGTTDVNGYWGSSTSTVSGSKIFIGYDGTTDPRTYGSSRAQSNI STGLTNYCKGANSCKIVCHSAGCYAIEYWLSNLGSTASSKGFNLTKVTALAAASGGSELASALNGISFGFGGNAMDKSLI VSTARGAFNHNNTAGVAVNHVPGYKGMFGASAILPGEDDYAVAYHSSCGYNKAGGLNKCQSSLTQSEGIWPFNKNVTYTQ YSGHYRAPSVTSTGLYLDHSEIKKEGYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28075; Mature: 28075
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSITTILAFLVAGSLSAQTYTVFIHGKSDKNHNGVGTTDVNGYWGSSTSTVSGSKIFI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCEEEE GYDGTTDPRTYGSSRAQSNISTGLTNYCKGANSCKIVCHSAGCYAIEYWLSNLGSTASSK EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC GFNLTKVTALAAASGGSELASALNGISFGFGGNAMDKSLIVSTARGAFNHNNTAGVAVNH CCCEEHHEEEHHCCCHHHHHHHHCCCEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEEC VPGYKGMFGASAILPGEDDYAVAYHSSCGYNKAGGLNKCQSSLTQSEGIWPFNKNVTYTQ CCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE YSGHYRAPSVTSTGLYLDHSEIKKEGYR ECCCCCCCCCCCCCEEEEHHHHHHCCCC >Mature Secondary Structure MRSSITTILAFLVAGSLSAQTYTVFIHGKSDKNHNGVGTTDVNGYWGSSTSTVSGSKIFI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEECCCEEEE GYDGTTDPRTYGSSRAQSNISTGLTNYCKGANSCKIVCHSAGCYAIEYWLSNLGSTASSK EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC GFNLTKVTALAAASGGSELASALNGISFGFGGNAMDKSLIVSTARGAFNHNNTAGVAVNH CCCEEHHEEEHHCCCHHHHHHHHCCCEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEEC VPGYKGMFGASAILPGEDDYAVAYHSSCGYNKAGGLNKCQSSLTQSEGIWPFNKNVTYTQ CCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE YSGHYRAPSVTSTGLYLDHSEIKKEGYR ECCCCCCCCCCCCCEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA