| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220265
Identifier: 183220265
GI number: 183220265
Start: 876804
End: 877586
Strand: Reverse
Name: 183220265
Synonym: LEPBI_I0858
Alternate gene names: NA
Gene position: 877586-876804 (Counterclockwise)
Preceding gene: 183220266
Following gene: 183220260
Centisome position: 24.38
GC content: 47.13
Gene sequence:
>783_bases ATGCGAAGCACCATCACAACTGTACTCGCGTTCCTCCTCGCAGGATCGCTCAGTGCACAAACCTACACCGTGTTCATCCA CGGAAAATCAGACAAAAACCACAATGGCGTGGGAACAAGCGACGTGAATTCGTATTGGGGAACCTCTGCGAATACTGTCT CTGGATCGAAAGTATTCATCGGTTACGATGGAAGAACTGATCCCAGAACCTACGGAAGCGCTCGTGCCCAAACGAACATT TCAACAGGACTGACAAACTATTGCAAAGGTGGAAAATCTTGCAAAATCGTATGCCACTCTGCGGGATGTTATGCGATTGA GTTTTGGTTGGCGAATTTAGGATCCACTGCTTCTGCAAAGGGTTTCAATCTAACAAAAGTGACTGCTCTCGCAGCTGCTT CTGGTGGATCGGAACTTGCATCCGCTCTGAATGGCGCAACATTCGGATTTGGTGGGAACGCAATGGACAAGTCACTCATC GTATCCACAGCTCGTGGTGCGTTTAACCATAACAACACGGGAGGAGTTCAAATTCACCATGTACCAGGTTACAAAGGTGC TTTTGGACCGTCTGCCATCCTTCCAGGTGAAGATGATTATGCAGTGGCTTATCACTCTGCTTGCGGATACAACCGTGCAG GTGGACTTAGCAAATGCCAATCATCCATCGTAAGTGGTAGCACTACTTATACACAATACTCAGGGCACGTAAGAGCTCCC TCTCTTACATCTGCTGGATTGTATAAGAACCATAGTGAGATCAAAAACGAAGGAACTAGATAA
Upstream 100 bases:
>100_bases GGCTGGTCTTTTTTTTTGCCCCAATATAATATAAATTGACACATTTGCCTTAATTGTGGAATTTGTGCTTAAATAAAGAA AATCAGGAAAGGGAAAAAAT
Downstream 100 bases:
>100_bases GAGTAGGTTTAAAAAAACCCAACTACTTTTGGTAGATGGGTTTTCATTTGAGAAGCTGAAGGGAAACCTTCAGCTTTTTT TGTTTCCTGCGGAAATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRSTITTVLAFLLAGSLSAQTYTVFIHGKSDKNHNGVGTSDVNSYWGTSANTVSGSKVFIGYDGRTDPRTYGSARAQTNI STGLTNYCKGGKSCKIVCHSAGCYAIEFWLANLGSTASAKGFNLTKVTALAAASGGSELASALNGATFGFGGNAMDKSLI VSTARGAFNHNNTGGVQIHHVPGYKGAFGPSAILPGEDDYAVAYHSACGYNRAGGLSKCQSSIVSGSTTYTQYSGHVRAP SLTSAGLYKNHSEIKNEGTR
Sequences:
>Translated_260_residues MRSTITTVLAFLLAGSLSAQTYTVFIHGKSDKNHNGVGTSDVNSYWGTSANTVSGSKVFIGYDGRTDPRTYGSARAQTNI STGLTNYCKGGKSCKIVCHSAGCYAIEFWLANLGSTASAKGFNLTKVTALAAASGGSELASALNGATFGFGGNAMDKSLI VSTARGAFNHNNTGGVQIHHVPGYKGAFGPSAILPGEDDYAVAYHSACGYNRAGGLSKCQSSIVSGSTTYTQYSGHVRAP SLTSAGLYKNHSEIKNEGTR >Mature_260_residues MRSTITTVLAFLLAGSLSAQTYTVFIHGKSDKNHNGVGTSDVNSYWGTSANTVSGSKVFIGYDGRTDPRTYGSARAQTNI STGLTNYCKGGKSCKIVCHSAGCYAIEFWLANLGSTASAKGFNLTKVTALAAASGGSELASALNGATFGFGGNAMDKSLI VSTARGAFNHNNTGGVQIHHVPGYKGAFGPSAILPGEDDYAVAYHSACGYNRAGGLSKCQSSIVSGSTTYTQYSGHVRAP SLTSAGLYKNHSEIKNEGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26898; Mature: 26898
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTITTVLAFLLAGSLSAQTYTVFIHGKSDKNHNGVGTSDVNSYWGTSANTVSGSKVFI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEE GYDGRTDPRTYGSARAQTNISTGLTNYCKGGKSCKIVCHSAGCYAIEFWLANLGSTASAK EECCCCCCCCCCCCCCCCCHHHCHHHHHCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCC GFNLTKVTALAAASGGSELASALNGATFGFGGNAMDKSLIVSTARGAFNHNNTGGVQIHH CCCHHHHEEEHHCCCHHHHHHHHCCCEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEEE VPGYKGAFGPSAILPGEDDYAVAYHSACGYNRAGGLSKCQSSIVSGSTTYTQYSGHVRAP CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCEECCC SLTSAGLYKNHSEIKNEGTR CCCCCCHHCCHHHHHCCCCC >Mature Secondary Structure MRSTITTVLAFLLAGSLSAQTYTVFIHGKSDKNHNGVGTSDVNSYWGTSANTVSGSKVFI CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEE GYDGRTDPRTYGSARAQTNISTGLTNYCKGGKSCKIVCHSAGCYAIEFWLANLGSTASAK EECCCCCCCCCCCCCCCCCHHHCHHHHHCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCC GFNLTKVTALAAASGGSELASALNGATFGFGGNAMDKSLIVSTARGAFNHNNTGGVQIHH CCCHHHHEEEHHCCCHHHHHHHHCCCEECCCCCCCCHHHEEEECCCCCCCCCCCCEEEEE VPGYKGAFGPSAILPGEDDYAVAYHSACGYNRAGGLSKCQSSIVSGSTTYTQYSGHVRAP CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCEECCC SLTSAGLYKNHSEIKNEGTR CCCCCCHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA