| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220263
Identifier: 183220263
GI number: 183220263
Start: 872123
End: 873535
Strand: Direct
Name: 183220263
Synonym: LEPBI_I0856
Alternate gene names: NA
Gene position: 872123-873535 (Clockwise)
Preceding gene: 183220262
Following gene: 183220264
Centisome position: 24.23
GC content: 36.66
Gene sequence:
>1413_bases ATGAAATATTTCATCAGCTTTTTACTTCTTGTCACACCAGTTTATCTTTCTGCGGAAGGAGTAGGTTTTAATGAACTTTG GAAAAGAATCGAAGAAAATTCATCAGCAAGAAAATCCAAATATTTGGAGTGGAAAGCTGGTGAAATTGCAAAGGACAGAT CCGACAAACACTGGTTACCTAGGGTTTATGCCGATCTTAGAACCTTTCAAACAAACGATCCCACACTCAACTTTATGGGG AAACTCAGTCAAAGGAGTGCAACCGATGCCGATTTTTCGACTGCTTCCACTCGTTATCGTCCCGGAAACTTTTTAGATTC GAATAATCAACCTTATACGACACTCAATTCTGACACGATGAATCTTTTTGCGAAAGATACATTAAATTATCCAGGAAGTC ATCAGTATTCCAGAGGAACTCTTGGAATGGATCTACCACTCTACGAAGGTGGGTCTAGTAAAACATTCGCAGCAATGAAT GAAAAAAGAAGTACTGGATTAAAATTTGAATGGTTAGCCATTCGCGATCGGGAATTTGCACAAGCAGGTTTCTACTACCG CGCCATCCAAAGTTTAACAGATTATCAGAAGAGACTCGAACAAATTAAAAAGATCGAACGTCGATTCCAATCGAATTATT CATTGGGTAACAAAGGTAACCCTGTTGGGTATGCAGGATACCTTGCCCTAAAATCGATTCAAAACCAAATCGCAGTTTTA GAGAAACAATCACAATTACAAATCAACGATTATAAAGAAACGTTATACGTATTGTCCGATGTTCCATCGACTGATTTGGA AATTGTAGAATCGGATCTAAATTCTTTTTTAGATACATATTTCAAAAGACCCGTTGGATATGAAAGATCCAACCAAATGA ATGCACAGATTAAGTATGCAGAAGGTGAAAAACTGAAAGCAGAAATGGAGATGGCAAAATTTCTACCAAAAGTTGGTGCT TACTCGGAAGCATATGGTTACCAAGGAAGTCGCAACATTTCGAATGCCTACCAAGCAGGTGTGTATTTACAAATGAATCT TTACAATCCTAAAGATATGGGAGTCGTAGAAGAATCTAAATTAAATGCAGAAGCCGCTCTTAAAAAAATAGAAGAGAAAA CTAAAGAAGAAGAAGCACATGTGAAGTCACTGATTCAAAAAGAAATCTCTTTGAAAGAAAGTTTGGAGCTTATAAAAGAA ACTGTGAAATTTCAAGAAGAACAAGTAACAAATATGCAACGGTTATTCCAAAGTGGAGCCATCAACGCCATTCAATTTGC AGAAACACTCAACAAATCTTTAGAATTATCACGCGTATTAATGGAAACTGAAATTACACTTTTACAAGTGAGAACAGAAG CATCGATATTTTCAAAAAAGGAAGACACAAATGAAGCCACTGGAAGAAATTAG
Upstream 100 bases:
>100_bases GTCGGTATCAACCTAGTTGTGTTTTCCACATTTGGGTTTTGTCCGATGGCGATCCTTTTAAACAAACTTGGTGCAACACC AAAGGTTAGGGACTAGTTCA
Downstream 100 bases:
>100_bases AGCAGGATTTGCAGGGCGACTTGCAGAAACATTTTTACATTCAAGGTTAACGCCTGTAATTGCAATCGCCAGTTTGGTGC TTGGTTTATTTGCAGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKYFISFLLLVTPVYLSAEGVGFNELWKRIEENSSARKSKYLEWKAGEIAKDRSDKHWLPRVYADLRTFQTNDPTLNFMG KLSQRSATDADFSTASTRYRPGNFLDSNNQPYTTLNSDTMNLFAKDTLNYPGSHQYSRGTLGMDLPLYEGGSSKTFAAMN EKRSTGLKFEWLAIRDREFAQAGFYYRAIQSLTDYQKRLEQIKKIERRFQSNYSLGNKGNPVGYAGYLALKSIQNQIAVL EKQSQLQINDYKETLYVLSDVPSTDLEIVESDLNSFLDTYFKRPVGYERSNQMNAQIKYAEGEKLKAEMEMAKFLPKVGA YSEAYGYQGSRNISNAYQAGVYLQMNLYNPKDMGVVEESKLNAEAALKKIEEKTKEEEAHVKSLIQKEISLKESLELIKE TVKFQEEQVTNMQRLFQSGAINAIQFAETLNKSLELSRVLMETEITLLQVRTEASIFSKKEDTNEATGRN
Sequences:
>Translated_470_residues MKYFISFLLLVTPVYLSAEGVGFNELWKRIEENSSARKSKYLEWKAGEIAKDRSDKHWLPRVYADLRTFQTNDPTLNFMG KLSQRSATDADFSTASTRYRPGNFLDSNNQPYTTLNSDTMNLFAKDTLNYPGSHQYSRGTLGMDLPLYEGGSSKTFAAMN EKRSTGLKFEWLAIRDREFAQAGFYYRAIQSLTDYQKRLEQIKKIERRFQSNYSLGNKGNPVGYAGYLALKSIQNQIAVL EKQSQLQINDYKETLYVLSDVPSTDLEIVESDLNSFLDTYFKRPVGYERSNQMNAQIKYAEGEKLKAEMEMAKFLPKVGA YSEAYGYQGSRNISNAYQAGVYLQMNLYNPKDMGVVEESKLNAEAALKKIEEKTKEEEAHVKSLIQKEISLKESLELIKE TVKFQEEQVTNMQRLFQSGAINAIQFAETLNKSLELSRVLMETEITLLQVRTEASIFSKKEDTNEATGRN >Mature_470_residues MKYFISFLLLVTPVYLSAEGVGFNELWKRIEENSSARKSKYLEWKAGEIAKDRSDKHWLPRVYADLRTFQTNDPTLNFMG KLSQRSATDADFSTASTRYRPGNFLDSNNQPYTTLNSDTMNLFAKDTLNYPGSHQYSRGTLGMDLPLYEGGSSKTFAAMN EKRSTGLKFEWLAIRDREFAQAGFYYRAIQSLTDYQKRLEQIKKIERRFQSNYSLGNKGNPVGYAGYLALKSIQNQIAVL EKQSQLQINDYKETLYVLSDVPSTDLEIVESDLNSFLDTYFKRPVGYERSNQMNAQIKYAEGEKLKAEMEMAKFLPKVGA YSEAYGYQGSRNISNAYQAGVYLQMNLYNPKDMGVVEESKLNAEAALKKIEEKTKEEEAHVKSLIQKEISLKESLELIKE TVKFQEEQVTNMQRLFQSGAINAIQFAETLNKSLELSRVLMETEITLLQVRTEASIFSKKEDTNEATGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53802; Mature: 53802
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFISFLLLVTPVYLSAEGVGFNELWKRIEENSSARKSKYLEWKAGEIAKDRSDKHWLP CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHCCCCCCCHHH RVYADLRTFQTNDPTLNFMGKLSQRSATDADFSTASTRYRPGNFLDSNNQPYTTLNSDTM HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHH NLFAKDTLNYPGSHQYSRGTLGMDLPLYEGGSSKTFAAMNEKRSTGLKFEWLAIRDREFA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEECCHHHH QAGFYYRAIQSLTDYQKRLEQIKKIERRFQSNYSLGNKGNPVGYAGYLALKSIQNQIAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EKQSQLQINDYKETLYVLSDVPSTDLEIVESDLNSFLDTYFKRPVGYERSNQMNAQIKYA HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC EGEKLKAEMEMAKFLPKVGAYSEAYGYQGSRNISNAYQAGVYLQMNLYNPKDMGVVEESK CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCHHHH LNAEAALKKIEEKTKEEEAHVKSLIQKEISLKESLELIKETVKFQEEQVTNMQRLFQSGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC INAIQFAETLNKSLELSRVLMETEITLLQVRTEASIFSKKEDTNEATGRN CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKYFISFLLLVTPVYLSAEGVGFNELWKRIEENSSARKSKYLEWKAGEIAKDRSDKHWLP CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHCCCCCCCHHH RVYADLRTFQTNDPTLNFMGKLSQRSATDADFSTASTRYRPGNFLDSNNQPYTTLNSDTM HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHH NLFAKDTLNYPGSHQYSRGTLGMDLPLYEGGSSKTFAAMNEKRSTGLKFEWLAIRDREFA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCEEEEEEECCHHHH QAGFYYRAIQSLTDYQKRLEQIKKIERRFQSNYSLGNKGNPVGYAGYLALKSIQNQIAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EKQSQLQINDYKETLYVLSDVPSTDLEIVESDLNSFLDTYFKRPVGYERSNQMNAQIKYA HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC EGEKLKAEMEMAKFLPKVGAYSEAYGYQGSRNISNAYQAGVYLQMNLYNPKDMGVVEESK CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCHHHH LNAEAALKKIEEKTKEEEAHVKSLIQKEISLKESLELIKETVKFQEEQVTNMQRLFQSGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC INAIQFAETLNKSLELSRVLMETEITLLQVRTEASIFSKKEDTNEATGRN CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA