| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ygaP [C]
Identifier: 183220262
GI number: 183220262
Start: 871849
End: 872118
Strand: Direct
Name: ygaP [C]
Synonym: LEPBI_I0855
Alternate gene names: 183220262
Gene position: 871849-872118 (Clockwise)
Preceding gene: 183220261
Following gene: 183220263
Centisome position: 24.22
GC content: 40.37
Gene sequence:
>270_bases ATGGGTATATATGGAGATAGACTATATACTATAGGGGGTATGGTAATGTTCTTAGCATCAACAAAAACATGGTATTTGGA GCGATTGGTTTTTCTCATCGCTGGAATCTTTAGTTTGGTAGGGGTCACACTTGGAGCCTATGTTTCTTCCTGGTGGTTTC TATTGAACTTACTTGTCGGTATCAACCTAGTTGTGTTTTCCACATTTGGGTTTTGTCCGATGGCGATCCTTTTAAACAAA CTTGGTGCAACACCAAAGGTTAGGGACTAG
Upstream 100 bases:
>100_bases GAAACCGATGTTAAAAAAGCCATTTCCGCAGCATTTTCCCTCTAAAACCAATCCTCCCTCTCAAACATCTCGATAAAAAA TACTTGCCATATATACCCCC
Downstream 100 bases:
>100_bases TTCAATGAAATATTTCATCAGCTTTTTACTTCTTGTCACACCAGTTTATCTTTCTGCGGAAGGAGTAGGTTTTAATGAAC TTTGGAAAAGAATCGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MGIYGDRLYTIGGMVMFLASTKTWYLERLVFLIAGIFSLVGVTLGAYVSSWWFLLNLLVGINLVVFSTFGFCPMAILLNK LGATPKVRD
Sequences:
>Translated_89_residues MGIYGDRLYTIGGMVMFLASTKTWYLERLVFLIAGIFSLVGVTLGAYVSSWWFLLNLLVGINLVVFSTFGFCPMAILLNK LGATPKVRD >Mature_88_residues GIYGDRLYTIGGMVMFLASTKTWYLERLVFLIAGIFSLVGVTLGAYVSSWWFLLNLLVGINLVVFSTFGFCPMAILLNKL GATPKVRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9873; Mature: 9742
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYGDRLYTIGGMVMFLASTKTWYLERLVFLIAGIFSLVGVTLGAYVSSWWFLLNLLVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLVVFSTFGFCPMAILLNKLGATPKVRD HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GIYGDRLYTIGGMVMFLASTKTWYLERLVFLIAGIFSLVGVTLGAYVSSWWFLLNLLVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLVVFSTFGFCPMAILLNKLGATPKVRD HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA