Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183220251

Identifier: 183220251

GI number: 183220251

Start: 856570

End: 857238

Strand: Direct

Name: 183220251

Synonym: LEPBI_I0844

Alternate gene names: NA

Gene position: 856570-857238 (Clockwise)

Preceding gene: 183220250

Following gene: 183220252

Centisome position: 23.8

GC content: 39.61

Gene sequence:

>669_bases
ATGCCGTTCCCTCTCTCCAGAACTGAGTTAGAGAAAGAAATCAAAACTTTGTTCTCCAATGGACTTTCGGGGAATGTGAA
CGATTTTTACTCTTGGGTGTTTATGGAAACCCAGAGAAAATTCAAAGATGTTCCAGACACAACTTTGGAAGCTGTCATTT
CCGTTTTGGATGAGTTTGTCAAAGACAGTCTCATTACCACAAATCCCATTGATCCACGCGAATACTATATTGCGGAAGAG
TCACCCATCATCCGAAAGATGGGAGCAACAGAAACTTTTGTCATCTTAGGTGCACTTCATTATAATCCCATGCAATATGT
TCGAGCCAGGCTTGCTTATTTTCTGAAACGAAATGGAATCGGGGAAGAGTTACGAATGGACCTTTGCATTGCGACAGTAG
AAGCTGTGGAAAATGCAGCGAAGTATGGAGATGGTGGTGGAGTGGAAGTCACCTTCCAAATTGACAAACATAAAGTTTTT
ACAATTGAAATGATCAACACCGTAAAAGATTTTAATTTAGAAGATGATATCCAAAGAGGTAAATTTTCATCCACAGCAAC
CCTCATGCGTGGTATGATGGTCATGCAAAAACTTTTTGATTCAGTGGACTTAGAGATCACTGATAACAGAAAACAAGCTA
TCCTTAAAGCAACTCGTAAACTAACATAG

Upstream 100 bases:

>100_bases
CATCATCCTTTATGAAGCACTGCGCCAAGAAAAAACACGGACTATCCCCTAAAGGATAAAACAATTTACAACTCCTCCGT
TCCCATTGAAATGGGAATAT

Downstream 100 bases:

>100_bases
GTTCCTATGGCAAATTTCAAAATGGTTTCTCCCTTTAAAGCTGCCGGAGACCAAGTGAAAGCAATTGAAAATATTGCGAA
GTCATTCGGTGAAGGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEE
SPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVF
TIEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT

Sequences:

>Translated_222_residues
MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEE
SPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVF
TIEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT
>Mature_221_residues
PFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEES
PIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFT
IEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25361; Mature: 25229

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFV
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KDSLITTNPIDPREYYIAEESPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGI
HHCCCCCCCCCCHHEEECCCCCHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHCCC
GEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFTIEMINTVKDFNLEDDIQRG
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHHHHCCCCHHHHHHC
KFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT
CCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KDSLITTNPIDPREYYIAEESPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGI
HHCCCCCCCCCCHHEEECCCCCHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHCCC
GEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFTIEMINTVKDFNLEDDIQRG
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHHHHCCCCHHHHHHC
KFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT
CCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA