| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220251
Identifier: 183220251
GI number: 183220251
Start: 856570
End: 857238
Strand: Direct
Name: 183220251
Synonym: LEPBI_I0844
Alternate gene names: NA
Gene position: 856570-857238 (Clockwise)
Preceding gene: 183220250
Following gene: 183220252
Centisome position: 23.8
GC content: 39.61
Gene sequence:
>669_bases ATGCCGTTCCCTCTCTCCAGAACTGAGTTAGAGAAAGAAATCAAAACTTTGTTCTCCAATGGACTTTCGGGGAATGTGAA CGATTTTTACTCTTGGGTGTTTATGGAAACCCAGAGAAAATTCAAAGATGTTCCAGACACAACTTTGGAAGCTGTCATTT CCGTTTTGGATGAGTTTGTCAAAGACAGTCTCATTACCACAAATCCCATTGATCCACGCGAATACTATATTGCGGAAGAG TCACCCATCATCCGAAAGATGGGAGCAACAGAAACTTTTGTCATCTTAGGTGCACTTCATTATAATCCCATGCAATATGT TCGAGCCAGGCTTGCTTATTTTCTGAAACGAAATGGAATCGGGGAAGAGTTACGAATGGACCTTTGCATTGCGACAGTAG AAGCTGTGGAAAATGCAGCGAAGTATGGAGATGGTGGTGGAGTGGAAGTCACCTTCCAAATTGACAAACATAAAGTTTTT ACAATTGAAATGATCAACACCGTAAAAGATTTTAATTTAGAAGATGATATCCAAAGAGGTAAATTTTCATCCACAGCAAC CCTCATGCGTGGTATGATGGTCATGCAAAAACTTTTTGATTCAGTGGACTTAGAGATCACTGATAACAGAAAACAAGCTA TCCTTAAAGCAACTCGTAAACTAACATAG
Upstream 100 bases:
>100_bases CATCATCCTTTATGAAGCACTGCGCCAAGAAAAAACACGGACTATCCCCTAAAGGATAAAACAATTTACAACTCCTCCGT TCCCATTGAAATGGGAATAT
Downstream 100 bases:
>100_bases GTTCCTATGGCAAATTTCAAAATGGTTTCTCCCTTTAAAGCTGCCGGAGACCAAGTGAAAGCAATTGAAAATATTGCGAA GTCATTCGGTGAAGGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEE SPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVF TIEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT
Sequences:
>Translated_222_residues MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEE SPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVF TIEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT >Mature_221_residues PFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFVKDSLITTNPIDPREYYIAEES PIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGIGEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFT IEMINTVKDFNLEDDIQRGKFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25361; Mature: 25229
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFV CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KDSLITTNPIDPREYYIAEESPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGI HHCCCCCCCCCCHHEEECCCCCHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHCCC GEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFTIEMINTVKDFNLEDDIQRG CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHHHHCCCCHHHHHHC KFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT CCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCC >Mature Secondary Structure PFPLSRTELEKEIKTLFSNGLSGNVNDFYSWVFMETQRKFKDVPDTTLEAVISVLDEFV CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KDSLITTNPIDPREYYIAEESPIIRKMGATETFVILGALHYNPMQYVRARLAYFLKRNGI HHCCCCCCCCCCHHEEECCCCCHHHHCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHCCC GEELRMDLCIATVEAVENAAKYGDGGGVEVTFQIDKHKVFTIEMINTVKDFNLEDDIQRG CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEHHHHHCCCCHHHHHHC KFSSTATLMRGMMVMQKLFDSVDLEITDNRKQAILKATRKLT CCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA