Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220224
Identifier: 183220224
GI number: 183220224
Start: 831681
End: 832271
Strand: Reverse
Name: 183220224
Synonym: LEPBI_I0816
Alternate gene names: NA
Gene position: 832271-831681 (Counterclockwise)
Preceding gene: 183220226
Following gene: 183220223
Centisome position: 23.12
GC content: 44.16
Gene sequence:
>591_bases GTGTTAAATGTGGAATTTCGAATGAGTCTAACCCGGTCCAAACAACTTTTCCTTATTTGCAGATTCCTTTGGCTTTTTGT TCTTTTTTCTACCAGTGGGAGTGCCAAAGAGAGAAAGGTGATTCGTTTTTCAGGCGAATTGATCAGTTGGGAGTCAGTCG GTGAAAACTCCCACTTTCGTTTTTTGGATGCAACCAATTTACGGGAACGAACCATCCTATGTGATCCCGAAACCATGAGC CTTAGTTTTGGAAACAAAACGAAAGGCAATCTTTATGTGGAAGGAAAAGCAGCCCAAAGTTCCCCCACTTCGGACCAGTG GCTTTGTGTGGGCAAACCCCATGTATTCCAAAAATACCAAGTGACCTCACAAGCCCGGCAAGCGCAGACAAAAACCATCC AAGGCCAAGTGGTGGAAGCAGATCCATCGACTGGCCAAATCGTATATTTAGTGCGTGGGAGACGGTTTTACATCACCATT GACCCAATGGATGCAAAAGAAATGGCAGAAGCCCTTTCCCAAATGAAAACAGTCACAATTGACGGGGAATACCGTTATGA CCGGATCAAACGTTATTATGTAAAAGATTGA
Upstream 100 bases:
>100_bases AACGAATGCCAGTGAGCAGCCGTTCATACCGACAATTGCAATGAAACTAGTGCTTCTCATAAGATTTGTCAAATAAAATT GTTAAATCTTCACGAAAATT
Downstream 100 bases:
>100_bases TGAATTTTTGTTCGCAAGCCTGGCCCAATTCCTTGGAATGGATTTGATGCAGGCTTTTTTGGTTTTAGCAAACGGAACGG TCATGAAGGGCCGATCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLNVEFRMSLTRSKQLFLICRFLWLFVLFSTSGSAKERKVIRFSGELISWESVGENSHFRFLDATNLRERTILCDPETMS LSFGNKTKGNLYVEGKAAQSSPTSDQWLCVGKPHVFQKYQVTSQARQAQTKTIQGQVVEADPSTGQIVYLVRGRRFYITI DPMDAKEMAEALSQMKTVTIDGEYRYDRIKRYYVKD
Sequences:
>Translated_196_residues MLNVEFRMSLTRSKQLFLICRFLWLFVLFSTSGSAKERKVIRFSGELISWESVGENSHFRFLDATNLRERTILCDPETMS LSFGNKTKGNLYVEGKAAQSSPTSDQWLCVGKPHVFQKYQVTSQARQAQTKTIQGQVVEADPSTGQIVYLVRGRRFYITI DPMDAKEMAEALSQMKTVTIDGEYRYDRIKRYYVKD >Mature_196_residues MLNVEFRMSLTRSKQLFLICRFLWLFVLFSTSGSAKERKVIRFSGELISWESVGENSHFRFLDATNLRERTILCDPETMS LSFGNKTKGNLYVEGKAAQSSPTSDQWLCVGKPHVFQKYQVTSQARQAQTKTIQGQVVEADPSTGQIVYLVRGRRFYITI DPMDAKEMAEALSQMKTVTIDGEYRYDRIKRYYVKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22624; Mature: 22624
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVEFRMSLTRSKQLFLICRFLWLFVLFSTSGSAKERKVIRFSGELISWESVGENSHFR CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCEEEEECCCCCCCEE FLDATNLRERTILCDPETMSLSFGNKTKGNLYVEGKAAQSSPTSDQWLCVGKPHVFQKYQ EEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHH VTSQARQAQTKTIQGQVVEADPSTGQIVYLVRGRRFYITIDPMDAKEMAEALSQMKTVTI HHHHHHHHHHHEECCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHCEEEEE DGEYRYDRIKRYYVKD CCCCCHHHHEEEECCC >Mature Secondary Structure MLNVEFRMSLTRSKQLFLICRFLWLFVLFSTSGSAKERKVIRFSGELISWESVGENSHFR CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCEEEEECCCCCCCEE FLDATNLRERTILCDPETMSLSFGNKTKGNLYVEGKAAQSSPTSDQWLCVGKPHVFQKYQ EEECCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHH VTSQARQAQTKTIQGQVVEADPSTGQIVYLVRGRRFYITIDPMDAKEMAEALSQMKTVTI HHHHHHHHHHHEECCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHCEEEEE DGEYRYDRIKRYYVKD CCCCCHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA